RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 CYP21A2P08686 494 aa18.72■□□□□ 0.59
COL18A1-205ENST00000423214 CCND2P30279 289 aa18.72■□□□□ 0.59
COL18A1-205ENST00000423214 RBL2Q08999 1139 aa18.72■□□□□ 0.59
COL18A1-205ENST00000423214 SKIV2LQ15477 1246 aaKnown RBP18.72■□□□□ 0.59
COL18A1-205ENST00000423214 CNKSR3Q6P9H4 555 aa18.72■□□□□ 0.59
COL18A1-205ENST00000423214 NCOA7Q8NI08 942 aa18.72■□□□□ 0.59
COL18A1-205ENST00000423214 DHX38Q92620 1227 aaKnown RBP18.72■□□□□ 0.59
COL18A1-205ENST00000423214 SPATA33Q96N06 139 aa18.72■□□□□ 0.59
COL18A1-205ENST00000423214 CTAGE1Q96RT6 745 aa18.72■□□□□ 0.59
COL18A1-205ENST00000423214 PIGSQ96S52 555 aa18.72■□□□□ 0.59
COL18A1-205ENST00000423214 GCOM1H8Y6P7 765 aaPredicted RBP18.71■□□□□ 0.59
COL18A1-205ENST00000423214 POLR2MP0CAP2 368 aa18.71■□□□□ 0.59
COL18A1-205ENST00000423214 CKBP12277 381 aa18.71■□□□□ 0.59
COL18A1-205ENST00000423214 STOX1Q6ZVD7 989 aa18.71■□□□□ 0.59
COL18A1-205ENST00000423214 FCHSD1Q86WN1 690 aa18.71■□□□□ 0.59
COL18A1-205ENST00000423214 IL31RAQ8NI17 732 aa18.71■□□□□ 0.59
COL18A1-205ENST00000423214 ADAMTS19Q8TE59 1207 aa18.71■□□□□ 0.59
COL18A1-205ENST00000423214 ARNTL2Q8WYA1 636 aa18.71■□□□□ 0.59
COL18A1-205ENST00000423214 E7EWF7 191 aa18.7■□□□□ 0.58
COL18A1-205ENST00000423214 UBA1P22314 1058 aaKnown RBP18.7■□□□□ 0.58
COL18A1-205ENST00000423214 CHMLP26374 656 aa18.7■□□□□ 0.58
COL18A1-205ENST00000423214 WDR5P61964 334 aaKnown RBP18.7■□□□□ 0.58
COL18A1-205ENST00000423214 PTH1RQ03431 593 aa18.7■□□□□ 0.58
COL18A1-205ENST00000423214 PTK7Q13308 1070 aa18.7■□□□□ 0.58
COL18A1-205ENST00000423214 CELF3Q5SZQ8 465 aaKnown RBP18.7■□□□□ 0.58
COL18A1-205ENST00000423214 CATIPQ7Z7H3 387 aa18.7■□□□□ 0.58
COL18A1-205ENST00000423214 ZBED2Q9BTP6 218 aa18.7■□□□□ 0.58
COL18A1-205ENST00000423214 RIOX1Q9H6W3 641 aa18.7■□□□□ 0.58
COL18A1-205ENST00000423214 PNMA6FA0A0J9YX94 578 aa18.69■□□□□ 0.58
COL18A1-205ENST00000423214 HAS3O00219 553 aa18.69■□□□□ 0.58
COL18A1-205ENST00000423214 RFXAPO00287 272 aa18.69■□□□□ 0.58
COL18A1-205ENST00000423214 RGS20O76081 388 aa18.69■□□□□ 0.58
COL18A1-205ENST00000423214 TAP1Q03518 808 aa18.69■□□□□ 0.58
COL18A1-205ENST00000423214 HSDL1Q3SXM5 330 aa18.69■□□□□ 0.58
COL18A1-205ENST00000423214 GNPTABQ3T906 1256 aa18.69■□□□□ 0.58
COL18A1-205ENST00000423214 MYSM1Q5VVJ2 828 aa18.69■□□□□ 0.58
COL18A1-205ENST00000423214 UHRF1Q96T88 793 aaPredicted RBP18.69■□□□□ 0.58
COL18A1-205ENST00000423214 MLXIPQ9HAP2 919 aa18.69■□□□□ 0.58
COL18A1-205ENST00000423214 BRWD1Q9NSI6 2320 aa18.68■□□□□ 0.58
COL18A1-205ENST00000423214 EFCAB14O75071 495 aa18.68■□□□□ 0.58
COL18A1-205ENST00000423214 CXCL10P02778 98 aa18.68■□□□□ 0.58
COL18A1-205ENST00000423214 TGFB3P10600 412 aa18.68■□□□□ 0.58
COL18A1-205ENST00000423214 HOXD8P13378 290 aaPredicted RBP18.68■□□□□ 0.58
COL18A1-205ENST00000423214 AAK1Q2M2I8 961 aa18.68■□□□□ 0.58
COL18A1-205ENST00000423214 VSIG10LQ86VR7 867 aa18.68■□□□□ 0.58
COL18A1-205ENST00000423214 PIBF1Q8WXW3 757 aa18.68■□□□□ 0.58
COL18A1-205ENST00000423214 MTCH2Q9Y6C9 303 aa18.68■□□□□ 0.58
COL18A1-205ENST00000423214 RALGAPA2Q2PPJ7 1873 aa18.68■□□□□ 0.58
COL18A1-205ENST00000423214 EPOPA6NHQ4 379 aa18.67■□□□□ 0.58
COL18A1-205ENST00000423214 NOP56O00567 594 aaKnown RBP18.67■□□□□ 0.58
COL18A1-205ENST00000423214 SGSM2O43147 1006 aa18.67■□□□□ 0.58
COL18A1-205ENST00000423214 CYTH3O43739 400 aa18.67■□□□□ 0.58
COL18A1-205ENST00000423214 NBNO60934 754 aa18.67■□□□□ 0.58
COL18A1-205ENST00000423214 PPFIA4O75335 1185 aa18.67■□□□□ 0.58
COL18A1-205ENST00000423214 ARHGEF15O94989 841 aa18.67■□□□□ 0.58
COL18A1-205ENST00000423214 DEFB103AP81534 67 aa18.67■□□□□ 0.58
COL18A1-205ENST00000423214 TROAPQ12815 778 aa18.67■□□□□ 0.58
COL18A1-205ENST00000423214 SLC35G1Q2M3R5 365 aa18.67■□□□□ 0.58
COL18A1-205ENST00000423214 CTCFLQ8NI51 663 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-205ENST00000423214 ZFP91Q96JP5 570 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-205ENST00000423214 SENP2Q9HC62 589 aa18.67■□□□□ 0.58
COL18A1-205ENST00000423214 EMSYQ7Z589 1322 aa18.67■□□□□ 0.58
COL18A1-205ENST00000423214 BDP1A6H8Y1 2624 aa18.67■□□□□ 0.58
COL18A1-205ENST00000423214 XIRP2A4UGR9 3374 aa18.66■□□□□ 0.58
COL18A1-205ENST00000423214 ABHD14A-ACY1A0A1B0GW23 586 aa18.66■□□□□ 0.58
COL18A1-205ENST00000423214 STAM2O75886 525 aa18.66■□□□□ 0.58
COL18A1-205ENST00000423214 ZNF200P98182 395 aaPredicted RBP18.66■□□□□ 0.58
COL18A1-205ENST00000423214 IKBKEQ14164 716 aa18.66■□□□□ 0.58
COL18A1-205ENST00000423214 ZNF618Q5T7W0 954 aa18.66■□□□□ 0.58
COL18A1-205ENST00000423214 CASC1Q6TDU7 716 aa18.66■□□□□ 0.58
COL18A1-205ENST00000423214 TMCO2Q7Z6W1 182 aaPredicted RBP18.66■□□□□ 0.58
COL18A1-205ENST00000423214 SEC63Q9UGP8 760 aaKnown RBP18.66■□□□□ 0.58
COL18A1-205ENST00000423214 TAF6LQ9Y6J9 622 aa18.66■□□□□ 0.58
COL18A1-205ENST00000423214 FRMPD4Q14CM0 1322 aa18.66■□□□□ 0.58
COL18A1-205ENST00000423214 LOXHD1Q8IVV2 1947 aa18.65■□□□□ 0.58
COL18A1-205ENST00000423214 C17orf102A2RUQ5 167 aa18.65■□□□□ 0.58
COL18A1-205ENST00000423214 POU3F3P20264 500 aaPredicted RBP18.65■□□□□ 0.58
COL18A1-205ENST00000423214 KIF5BP33176 963 aa18.65■□□□□ 0.58
COL18A1-205ENST00000423214 SP2Q02086 613 aa18.65■□□□□ 0.58
COL18A1-205ENST00000423214 GPNMBQ14956 572 aa18.65■□□□□ 0.58
COL18A1-205ENST00000423214 TRIM71Q2Q1W2 868 aaKnown RBP18.65■□□□□ 0.58
COL18A1-205ENST00000423214 SMARCC2Q8TAQ2 1214 aa18.65■□□□□ 0.58
COL18A1-205ENST00000423214 GPKOWQ92917 476 aaPredicted RBP eCLIP18.65■□□□□ 0.582e-6■■■■■ 37.1
COL18A1-205ENST00000423214 CUL5Q93034 780 aa18.65■□□□□ 0.58
COL18A1-205ENST00000423214 WNT8BQ93098 351 aa18.65■□□□□ 0.58
COL18A1-205ENST00000423214 RRP36Q96EU6 259 aaKnown RBP18.65■□□□□ 0.58
COL18A1-205ENST00000423214 RBM8AQ9Y5S9 174 aaKnown RBP18.65■□□□□ 0.58
COL18A1-205ENST00000423214 LCHNA4D1U4 455 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 H3BRB1 525 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 LGR5O75473 907 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 DDAH1O94760 285 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 GJB5O95377 273 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 LGALS2P05162 132 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 THPOP40225 353 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 ANTXR2P58335 489 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 TFF2Q03403 129 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 GRB10Q13322 594 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 KRT40Q6A162 431 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 FAM117BQ6P1L5 589 aa18.64■□□□□ 0.57
COL18A1-205ENST00000423214 SERINC5Q86VE9 423 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms