RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 SLC4A7Q9Y6M7 1214 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 RANBP2P49792 3224 aaKnown RBP10.71□□□□□ -0.7
NUP50-206ENST00000422489 IQCF3P0C7M6 154 aa10.7□□□□□ -0.7
NUP50-206ENST00000422489 TGFB3P10600 412 aa10.7□□□□□ -0.7
NUP50-206ENST00000422489 FOSL2P15408 326 aa10.7□□□□□ -0.7
NUP50-206ENST00000422489 MRPS9P82933 396 aaKnown RBP10.7□□□□□ -0.7
NUP50-206ENST00000422489 MFSD10Q14728 455 aa10.7□□□□□ -0.7
NUP50-206ENST00000422489 GRIN2CQ14957 1233 aa10.7□□□□□ -0.7
NUP50-206ENST00000422489 KIAA0753Q2KHM9 967 aa10.7□□□□□ -0.7
NUP50-206ENST00000422489 ADCK5Q3MIX3 580 aa10.7□□□□□ -0.7
NUP50-206ENST00000422489 GNPTABQ3T906 1256 aa10.7□□□□□ -0.7
NUP50-206ENST00000422489 RASIP1Q5U651 963 aa10.7□□□□□ -0.7
NUP50-206ENST00000422489 DHX32Q7L7V1 743 aaKnown RBP10.7□□□□□ -0.7
NUP50-206ENST00000422489 RASEFQ8IZ41 740 aa10.7□□□□□ -0.7
NUP50-206ENST00000422489 PPTC7Q8NI37 304 aa10.7□□□□□ -0.7
NUP50-206ENST00000422489 EMID1Q96A84 441 aaPredicted RBP10.7□□□□□ -0.7
NUP50-206ENST00000422489 KATNAL1Q9BW62 490 aa10.7□□□□□ -0.7
NUP50-206ENST00000422489 ZNF576Q9H609 170 aa10.7□□□□□ -0.7
NUP50-206ENST00000422489 MCM3APO60318 1980 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 SPATA31C2B4DYI2 1134 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 NOP56O00567 594 aaKnown RBP10.69□□□□□ -0.7
NUP50-206ENST00000422489 ACTN1P12814 892 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 UBA1P22314 1058 aaKnown RBP10.69□□□□□ -0.7
NUP50-206ENST00000422489 RFC2P35250 354 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 RABGGTBP53611 331 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 ZNF200P98182 395 aaPredicted RBP10.69□□□□□ -0.7
NUP50-206ENST00000422489 EXOSC10Q01780 885 aaKnown RBP10.69□□□□□ -0.7
NUP50-206ENST00000422489 SP4Q02446 784 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 KRT32Q14532 448 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 RAB30Q15771 203 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 UBE2SQ16763 222 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 UTP14CQ5TAP6 766 aaKnown RBP10.69□□□□□ -0.7
NUP50-206ENST00000422489 TMTC3Q6ZXV5 915 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 CYFIP1Q7L576 1253 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 HEATR3Q7Z4Q2 680 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 NLRX1Q86UT6 975 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 SGMS1Q86VZ5 419 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 CCDC155Q8N6L0 562 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 NKX2-4Q9H2Z4 354 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 SLC28A3Q9HAS3 691 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 BRPF3Q9ULD4 1205 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 LTBP2Q14767 1821 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 LAMA4Q16363 1823 aa10.69□□□□□ -0.7
NUP50-206ENST00000422489 TMEM265A0A087WTH1 108 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 KLF18A0A0U1RQI7 1052 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 DLL1O00548 723 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 MEIS2O14770 477 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 ZBTB43O43298 467 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 FIBPO43427 364 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 STAM2O75886 525 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 NEFLP07196 543 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 PFKMP08237 780 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 CPA1P15085 419 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 ATP2A2P16615 1042 aaKnown RBP10.68□□□□□ -0.7
NUP50-206ENST00000422489 NEDD9Q14511 834 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 RTN1Q16799 776 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 XRRA1Q6P2D8 792 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 MAFAQ8NHW3 353 aaPredicted RBP10.68□□□□□ -0.7
NUP50-206ENST00000422489 PPM1EQ8WY54 764 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 PRDM12Q9H4Q4 367 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 RBM28Q9NW13 759 aaKnown RBP10.68□□□□□ -0.7
NUP50-206ENST00000422489 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 GTF2IRD1Q9UHL9 959 aa10.68□□□□□ -0.7
NUP50-206ENST00000422489 V9GY48 417 aaPredicted RBP10.68□□□□□ -0.7
NUP50-206ENST00000422489 DNAH12Q6ZR08 3092 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 C17orf102A2RUQ5 167 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 SPDYE3A6NKU9 549 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 GOLGA8AA7E2F4 631 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 GOLGA8BA8MQT2 603 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 H3BRB1 525 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 HAS3O00219 553 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 PIK3CDO00329 1044 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 PITPNM1O00562 1244 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 F2P00734 622 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 HMGB1P09429 215 aaKnown RBP10.67□□□□□ -0.7
NUP50-206ENST00000422489 MYOGP15173 224 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 SELPP16109 830 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 IGFBP4P22692 258 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 ICAM3P32942 547 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 PTK7Q13308 1070 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 TSGA10IPQ3SY00 556 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 PCNX4Q63HM2 1172 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 APOA5Q6Q788 366 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 LRRC8DQ7L1W4 858 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 SESTD1Q86VW0 696 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 CAGE1Q8TC20 777 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 AFAP1L1Q8TED9 768 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 DHX38Q92620 1227 aaKnown RBP10.67□□□□□ -0.7
NUP50-206ENST00000422489 VWCEQ96DN2 955 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 JAKMIP1Q96N16 626 aaKnown RBP10.67□□□□□ -0.7
NUP50-206ENST00000422489 INPP4AQ96PE3 977 aaPredicted RBP10.67□□□□□ -0.7
NUP50-206ENST00000422489 GAS2L1Q99501 681 aaPredicted RBP10.67□□□□□ -0.7
NUP50-206ENST00000422489 C16orf70Q9BSU1 422 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 TUT1Q9H6E5 874 aaKnown RBP10.67□□□□□ -0.7
NUP50-206ENST00000422489 PCDHA6Q9UN73 950 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 YBX2Q9Y2T7 364 aaKnown RBP10.67□□□□□ -0.7
NUP50-206ENST00000422489 PCDHA8Q9Y5H6 950 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 LRRC37A2A6NM11 1700 aa10.67□□□□□ -0.7
NUP50-206ENST00000422489 LCTP09848 1927 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 CKBP12277 381 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms