RNA–Protein interactions for RNA: ENST00000421621.2

YKT6-202, Transcript of YKT6 v-SNARE homolog, humanhuman

TSL 1 (best)

Gene YKT6, Length 2,463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YKT6-202ENST00000421621 USP17L1Q7RTZ2 530 aa17.43■□□□□ 0.38
YKT6-202ENST00000421621 ZNF444Q8N0Y2 327 aaPredicted RBP17.43■□□□□ 0.38
YKT6-202ENST00000421621 LARP4BQ92615 738 aaKnown RBP17.43■□□□□ 0.38
YKT6-202ENST00000421621 GJD4Q96KN9 370 aaPredicted RBP17.43■□□□□ 0.38
YKT6-202ENST00000421621 CCDC43Q96MW1 224 aaKnown RBP17.43■□□□□ 0.38
YKT6-202ENST00000421621 TMEM47Q9BQJ4 181 aa17.43■□□□□ 0.38
YKT6-202ENST00000421621 PAGR1Q9BTK6 254 aa17.43■□□□□ 0.38
YKT6-202ENST00000421621 HEXIM1O94992 359 aaKnown RBP17.43■□□□□ 0.38
YKT6-202ENST00000421621 SERPING1P05155 500 aa17.43■□□□□ 0.38
YKT6-202ENST00000421621 KLRK1P26718 216 aa17.43■□□□□ 0.38
YKT6-202ENST00000421621 TDRD12Q587J7 1177 aaKnown RBP17.43■□□□□ 0.38
YKT6-202ENST00000421621 SOGA3Q5TF21 947 aa17.43■□□□□ 0.38
YKT6-202ENST00000421621 DZIP1Q86YF9 867 aaKnown RBP17.43■□□□□ 0.38
YKT6-202ENST00000421621 WHAMMQ8TF30 809 aa17.43■□□□□ 0.38
YKT6-202ENST00000421621 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.43■□□□□ 0.38
YKT6-202ENST00000421621 KAT2BQ92831 832 aa17.43■□□□□ 0.38
YKT6-202ENST00000421621 CELF1Q92879 486 aaKnown RBP17.43■□□□□ 0.38
YKT6-202ENST00000421621 CEP72Q9P209 647 aa17.43■□□□□ 0.38
YKT6-202ENST00000421621 CCNL1Q9UK58 526 aaPredicted RBP17.43■□□□□ 0.38
YKT6-202ENST00000421621 BUB1O43683 1085 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 KIAA0754O94854 1291 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 KRT14P02533 472 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 CARSP49589 748 aaKnown RBP17.42■□□□□ 0.38
YKT6-202ENST00000421621 FXR2P51116 673 aaKnown RBP eCLIP17.42■□□□□ 0.38
YKT6-202ENST00000421621 TTC19Q6DKK2 380 aaPredicted RBP17.42■□□□□ 0.38
YKT6-202ENST00000421621 MICALCLQ6ZW33 695 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 SEPT12Q8IYM1 358 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 TBCKQ8TEA7 893 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 DYNLL2Q96FJ2 89 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 CDK5RAP3Q96JB5 506 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 ANKRD2Q9GZV1 360 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 EPB41L5Q9HCM4 733 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 NFU1Q9UMS0 254 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 STX8Q9UNK0 236 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 SMARCA1P28370 1054 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 GUCY2DQ02846 1103 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 NAB2Q15742 525 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 TBC1D9BQ66K14 1250 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 MS4A14Q96JA4 679 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 RABEP2Q9H5N1 569 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 SAMM50Q9Y512 469 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 NRAPQ86VF7 1730 aa17.42■□□□□ 0.38
YKT6-202ENST00000421621 ZNF233A6NK53 670 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 SRRM3A6NNA2 597 aaPredicted RBP17.41■□□□□ 0.38
YKT6-202ENST00000421621 TMEM266Q2M3C6 531 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 SLC4A8Q2Y0W8 1093 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 SFMBT2Q5VUG0 894 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 YTHDF3Q7Z739 585 aaKnown RBP17.41■□□□□ 0.38
YKT6-202ENST00000421621 CERS3Q8IU89 383 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 EIF1ADQ8N9N8 165 aaKnown RBP17.41■□□□□ 0.38
YKT6-202ENST00000421621 MTMR9Q96QG7 549 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 RAB34Q9BZG1 259 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 EPN3Q9H201 632 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 ESYT2A0FGR8 921 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 MEFVO15553 781 aaPredicted RBP17.41■□□□□ 0.38
YKT6-202ENST00000421621 LSP1P33241 339 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 TXKP42681 527 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 KCNMA1Q12791 1236 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 KCTD16Q68DU8 428 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 CNPY4Q8N129 248 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 SH2D3CQ8N5H7 860 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 PNMA5Q96PV4 448 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 TANGO6Q9C0B7 1094 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 QTRT2Q9H974 415 aaKnown RBP17.41■□□□□ 0.38
YKT6-202ENST00000421621 ZNF287Q9HBT7 754 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 TFCP2L1Q9NZI6 479 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 SEC63Q9UGP8 760 aaKnown RBP17.41■□□□□ 0.38
YKT6-202ENST00000421621 PCDHGC5Q9Y5F6 944 aa17.41■□□□□ 0.38
YKT6-202ENST00000421621 HMGB1P1B2RPK0 211 aaPredicted RBP17.4■□□□□ 0.38
YKT6-202ENST00000421621 PALMO75781 387 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 HNRNPH1P31943 449 aaKnown RBP17.4■□□□□ 0.38
YKT6-202ENST00000421621 RPS8P62241 208 aaKnown RBP17.4■□□□□ 0.38
YKT6-202ENST00000421621 FKBP3Q00688 224 aaKnown RBP17.4■□□□□ 0.38
YKT6-202ENST00000421621 EHHADHQ08426 723 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 CDC37Q16543 378 aaPredicted RBP17.4■□□□□ 0.38
YKT6-202ENST00000421621 SLC10A5Q5PT55 438 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 REXO1Q8N1G1 1221 aaKnown RBP17.4■□□□□ 0.38
YKT6-202ENST00000421621 OTUD6BQ8N6M0 293 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 IFT81Q8WYA0 676 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 RNPC3Q96LT9 517 aaKnown RBP17.4■□□□□ 0.38
YKT6-202ENST00000421621 GEMIN8Q9NWZ8 242 aaKnown RBP17.4■□□□□ 0.38
YKT6-202ENST00000421621 FAM153BP0C7A2 387 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 GOLGA8HP0CJ92 632 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 NR1D1P20393 614 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 ATP1A2P50993 1020 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 PDIA5Q14554 519 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 CALCRLQ16602 461 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 FAM153CQ494X1 144 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 FAM83BQ5T0W9 1011 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 MEI1Q5TIA1 1274 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 DYMQ7RTS9 669 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 RAD54LQ92698 747 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 FAM153AQ9UHL3 310 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 MTMR7Q9Y216 660 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 ATP6V0A2Q9Y487 856 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 COL4A3BPQ9Y5P4 624 aa17.4■□□□□ 0.38
YKT6-202ENST00000421621 MAST2Q6P0Q8 1798 aa17.39■□□□□ 0.37
YKT6-202ENST00000421621 PPP1R37O75864 691 aa17.39■□□□□ 0.37
YKT6-202ENST00000421621 FSBPO95073 299 aa17.39■□□□□ 0.37
YKT6-202ENST00000421621 TNNC1P63316 161 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms