RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 IVNS1ABPQ9Y6Y0 642 aa11.27□□□□□ -0.6
DDB1-202ENST00000414411 CENPFP49454 3210 aa11.27□□□□□ -0.6
DDB1-202ENST00000414411 ZNF236Q9UL36 1845 aa11.27□□□□□ -0.61
DDB1-202ENST00000414411 CCDC194A0A1B0GVG4 234 aa11.27□□□□□ -0.61
DDB1-202ENST00000414411 SOWAHBA6NEL2 793 aa11.27□□□□□ -0.61
DDB1-202ENST00000414411 POTEB2H3BUK9 544 aa11.27□□□□□ -0.61
DDB1-202ENST00000414411 TPM2P07951 284 aa11.27□□□□□ -0.61
DDB1-202ENST00000414411 SREBF1P36956 1147 aa11.27□□□□□ -0.61
DDB1-202ENST00000414411 TOB1P50616 345 aaPredicted RBP11.27□□□□□ -0.61
DDB1-202ENST00000414411 TERF1P54274 439 aa11.27□□□□□ -0.61
DDB1-202ENST00000414411 NONOQ15233 471 aaKnown RBP eCLIP11.27□□□□□ -0.61
DDB1-202ENST00000414411 ADALQ6DHV7 355 aa11.27□□□□□ -0.61
DDB1-202ENST00000414411 DNERQ8NFT8 737 aa11.27□□□□□ -0.61
DDB1-202ENST00000414411 ZNF830Q96NB3 372 aaPredicted RBP11.27□□□□□ -0.61
DDB1-202ENST00000414411 RMDN3Q96TC7 470 aa11.27□□□□□ -0.61
DDB1-202ENST00000414411 CLIC4Q9Y696 253 aa11.27□□□□□ -0.61
DDB1-202ENST00000414411 ZSWIM8A7E2V4 1837 aa11.26□□□□□ -0.61
DDB1-202ENST00000414411 TNPO2O14787 897 aaKnown RBP11.26□□□□□ -0.61
DDB1-202ENST00000414411 TPM3P06753 285 aa11.26□□□□□ -0.61
DDB1-202ENST00000414411 CYP3A4P08684 503 aa11.26□□□□□ -0.61
DDB1-202ENST00000414411 HOXC6P09630 235 aa11.26□□□□□ -0.61
DDB1-202ENST00000414411 FCGRTP55899 365 aa11.26□□□□□ -0.61
DDB1-202ENST00000414411 GNL2Q13823 731 aaKnown RBP11.26□□□□□ -0.61
DDB1-202ENST00000414411 STK38Q15208 465 aa11.26□□□□□ -0.61
DDB1-202ENST00000414411 STX1AQ16623 288 aa11.26□□□□□ -0.61
DDB1-202ENST00000414411 INF2Q27J81 1249 aa11.26□□□□□ -0.61
DDB1-202ENST00000414411 FMR1NBQ8N0W7 255 aaPredicted RBP11.26□□□□□ -0.61
DDB1-202ENST00000414411 NSUN6Q8TEA1 469 aaKnown RBP11.26□□□□□ -0.61
DDB1-202ENST00000414411 TBCKQ8TEA7 893 aa11.26□□□□□ -0.61
DDB1-202ENST00000414411 ZNF296Q8WUU4 475 aaPredicted RBP11.26□□□□□ -0.61
DDB1-202ENST00000414411 PXMP2Q9NR77 195 aa11.26□□□□□ -0.61
DDB1-202ENST00000414411 PLXNA1Q9UIW2 1896 aa11.26□□□□□ -0.61
DDB1-202ENST00000414411 DIS3Q9Y2L1 958 aaKnown RBP11.26□□□□□ -0.61
DDB1-202ENST00000414411 GOLGA6L6A8MZA4 724 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 SPTLC2O15270 562 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 FKTNO75072 461 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 EDNRBP24530 442 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 TRAPPC10P48553 1259 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 USP11P51784 963 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 ARHGAP4P98171 946 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 MAP2K5Q13163 448 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 PGM5Q15124 567 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 VSIG10LQ86VR7 867 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 IWS1Q96ST2 819 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 PDCD2LQ9BRP1 358 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 ADD3Q9UEY8 706 aaKnown RBP11.25□□□□□ -0.61
DDB1-202ENST00000414411 TSKSQ9UJT2 592 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 LOC102724159A0A0B4J2E5 919 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 WNT7AO00755 349 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 IGHA2P01877 340 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 NR3C2P08235 984 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 CIITAP33076 1130 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 ALDH5A1P51649 535 aaPredicted RBP11.25□□□□□ -0.61
DDB1-202ENST00000414411 MRPS9P82933 396 aaKnown RBP11.25□□□□□ -0.61
DDB1-202ENST00000414411 KIF22Q14807 665 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 IQCB1Q15051 598 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 PWP2Q15269 919 aaKnown RBP11.25□□□□□ -0.61
DDB1-202ENST00000414411 SF3A1Q15459 793 aaKnown RBP11.25□□□□□ -0.61
DDB1-202ENST00000414411 RILPL1Q5EBL4 403 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 ANO1Q5XXA6 986 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 PCNX4Q63HM2 1172 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 ZNF467Q7Z7K2 595 aaPredicted RBP11.25□□□□□ -0.61
DDB1-202ENST00000414411 NEK8Q86SG6 692 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 PLA2G4DQ86XP0 818 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 IL31RAQ8NI17 732 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 MORC4Q8TE76 937 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 NUDT12Q9BQG2 462 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 FARP1Q9Y4F1 1045 aaPredicted RBP11.25□□□□□ -0.61
DDB1-202ENST00000414411 MCM3APO60318 1980 aa11.25□□□□□ -0.61
DDB1-202ENST00000414411 CYP3A7-CYP3A51PA0A087WV96 503 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 GNRH1P01148 92 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 EIF2AK2P19525 551 aaKnown RBP11.24□□□□□ -0.61
DDB1-202ENST00000414411 CYP3A7P24462 503 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 NDUFA8P51970 172 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 UBXN2AP68543 259 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 ARHGEF16Q5VV41 709 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 XRRA1Q6P2D8 792 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 MAMDC4Q6UXC1 1216 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 C11orf57Q6ZUT1 292 aaPredicted RBP11.24□□□□□ -0.61
DDB1-202ENST00000414411 DPP9Q86TI2 863 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 SPC24Q8NBT2 197 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 NPLOC4Q8TAT6 608 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 CD99L2Q8TCZ2 262 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 SOCS4Q8WXH5 440 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 ERO1AQ96HE7 468 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 MAML3Q96JK9 1138 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 MBOAT7Q96N66 472 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 KCNF1Q9H3M0 494 aa11.24□□□□□ -0.61
DDB1-202ENST00000414411 R3HCC1Q9Y3T6 440 aaKnown RBP11.24□□□□□ -0.61
DDB1-202ENST00000414411 A0A1B0GVL5 298 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 XRCC5P13010 732 aaKnown RBP11.23□□□□□ -0.61
DDB1-202ENST00000414411 ZNF75DP51815 510 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 PPP4R3AQ6IN85 833 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 MOXD1Q6UVY6 613 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.23□□□□□ -0.61
DDB1-202ENST00000414411 EHMT1Q9H9B1 1298 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 SLC5A4Q9NY91 659 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 GABRQQ9UN88 632 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 CASP8AP2Q9UKL3 1982 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 IGLV3-22A0A075B6J6 115 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms