RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 LDHDQ86WU2 507 aa15.49■□□□□ 0.07
SCAF4-202ENST00000399804 ZFPM1Q8IX07 1006 aa15.49■□□□□ 0.07
SCAF4-202ENST00000399804 GOLGA6L10A6NI86 522 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 CLIC2O15247 247 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 CETN2P41208 172 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 ELF2Q15723 593 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 DACT2Q5SW24 774 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 SAMD7Q7Z3H4 446 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 RAD54LQ92698 747 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 TSGA10Q9BZW7 698 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 TRIM9Q9C026 710 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 THAP9Q9H5L6 903 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 ZNF215Q9UL58 517 aaPredicted RBP15.48■□□□□ 0.07
SCAF4-202ENST00000399804 ATRNO75882 1429 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 FAM170AA1A519 330 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 SHMT1P34896 483 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 CDR1P51861 262 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 DPYDQ12882 1025 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 STRN3Q13033 797 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 PSMD2Q13200 908 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 MAN2A1Q16706 1144 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 HPS3Q969F9 1004 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 PSMB7Q99436 277 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 FCER1AP12319 257 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 ARHGAP44Q17R89 818 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 RNF207Q6ZRF8 634 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 ACER1Q8TDN7 264 aa15.48■□□□□ 0.07
SCAF4-202ENST00000399804 SECISBP2LQ93073 1101 aaKnown RBP15.48■□□□□ 0.07
SCAF4-202ENST00000399804 SOWAHDA6NJG2 315 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 TAF3Q5VWG9 929 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 RMDN3Q96TC7 470 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 MLXIPQ9HAP2 919 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 ESYT2A0FGR8 921 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 PRPF6O94906 941 aaKnown RBP15.47■□□□□ 0.07
SCAF4-202ENST00000399804 SLURP2P0DP57 97 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 SLC51AQ86UW1 340 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 METTL14Q9HCE5 456 aaKnown RBP15.47■□□□□ 0.07
SCAF4-202ENST00000399804 GAKO14976 1311 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 PVALEFA0A1B0GWK0 134 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 SPDYE2BA6NHP3 402 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 CYTH3O43739 400 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 SPDYE6P0CI01 402 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 TNFAIP3P21580 790 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 ECE1P42892 770 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 PDIA5Q14554 519 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 IQCDQ96DY2 449 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 VCPKMTQ9H867 229 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 MYOZ2Q9NPC6 264 aa15.47■□□□□ 0.07
SCAF4-202ENST00000399804 RDXP35241 583 aaKnown RBP15.46■□□□□ 0.07
SCAF4-202ENST00000399804 CXCL9Q07325 125 aa15.46■□□□□ 0.07
SCAF4-202ENST00000399804 LMBR1Q8WVP7 490 aa15.46■□□□□ 0.07
SCAF4-202ENST00000399804 GINS2Q9Y248 185 aa15.46■□□□□ 0.07
SCAF4-202ENST00000399804 GMPSP49915 693 aaPredicted RBP15.46■□□□□ 0.07
SCAF4-202ENST00000399804 AGBL3Q8NEM8 1001 aa15.46■□□□□ 0.07
SCAF4-202ENST00000399804 IWS1Q96ST2 819 aa15.46■□□□□ 0.07
SCAF4-202ENST00000399804 NUCKS1Q9H1E3 243 aaKnown RBP15.46■□□□□ 0.07
SCAF4-202ENST00000399804 NDST4Q9H3R1 872 aa15.46■□□□□ 0.07
SCAF4-202ENST00000399804 ANKRD13CQ8N6S4 541 aa15.46■□□□□ 0.07
SCAF4-202ENST00000399804 CTNNBL1Q8WYA6 563 aaPredicted RBP15.46■□□□□ 0.07
SCAF4-202ENST00000399804 CCDC127Q96BQ5 260 aa15.46■□□□□ 0.07
SCAF4-202ENST00000399804 PARVGQ9HBI0 331 aa15.46■□□□□ 0.07
SCAF4-202ENST00000399804 TMEM110-MUSTN1A8MSY1 372 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 LRRC63Q05C16 580 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 GBP6Q6ZN66 633 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 DAGLBQ8NCG7 672 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 ANKS1AQ92625 1134 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 PCDHAC2Q9Y5I4 1007 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 GAP43P17677 238 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 ZNF384Q8TF68 577 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 SELENOOQ9BVL4 669 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 EHD4Q9H223 541 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 FBXO28Q9NVF7 368 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 ABCB11O95342 1321 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 KRT5P13647 590 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 RNASE9P60153 205 aaKnown RBP15.45■□□□□ 0.06
SCAF4-202ENST00000399804 EXOC3L4Q17RC7 722 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 SEPT14Q6ZU15 432 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 EEPD1Q7L9B9 569 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 MB21D1Q8N884 522 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 KCNF1Q9H3M0 494 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 RIOX1Q9H6W3 641 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 ARMCX5Q6P1M9 558 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 NOX5Q96PH1 765 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 DEFB129Q9H1M3 183 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 RNF146Q9NTX7 359 aa15.45■□□□□ 0.06
SCAF4-202ENST00000399804 MTMR2Q13614 643 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 SNRNP48Q6IEG0 339 aaKnown RBP15.44■□□□□ 0.06
SCAF4-202ENST00000399804 ACRBPQ8NEB7 543 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 NKX2-3Q8TAU0 364 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 GOLGA5Q8TBA6 731 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 RGL1Q9NZL6 768 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 RNF181Q9P0P0 153 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 AP5Z1O43299 807 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 HMGCS2P54868 508 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 STK4Q13043 487 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 COASYQ13057 564 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 KCNB1Q14721 858 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 ERCC6LQ2NKX8 1250 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 NBPF9Q3BBW0 867 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 WDR44Q5JSH3 913 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms