RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 SBK1Q52WX2 424 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 FAM83BQ5T0W9 1011 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 KLHDC7AQ5VTJ3 777 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 SH3RF3Q8TEJ3 882 aaPredicted RBP16.22■□□□□ 0.19
CCNF-202ENST00000397066 DDX12PQ92771 950 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 NUCKS1Q9H1E3 243 aaKnown RBP16.22■□□□□ 0.19
CCNF-202ENST00000397066 SALL4Q9UJQ4 1053 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 TIAM2Q8IVF5 1701 aa16.21■□□□□ 0.19
CCNF-202ENST00000397066 SERPING1P05155 500 aa16.21■□□□□ 0.19
CCNF-202ENST00000397066 LSP1P33241 339 aa16.21■□□□□ 0.19
CCNF-202ENST00000397066 SEC24CP53992 1094 aa16.21■□□□□ 0.19
CCNF-202ENST00000397066 C12orf60Q5U649 245 aa16.21■□□□□ 0.19
CCNF-202ENST00000397066 MYCBPQ99417 103 aaPredicted RBP16.21■□□□□ 0.19
CCNF-202ENST00000397066 EYA3Q99504 573 aa16.21■□□□□ 0.19
CCNF-202ENST00000397066 COL4A3BPQ9Y5P4 624 aa16.21■□□□□ 0.19
CCNF-202ENST00000397066 GUF1Q8N442 669 aaKnown RBP16.21■□□□□ 0.19
CCNF-202ENST00000397066 CAVIN3Q969G5 261 aa16.21■□□□□ 0.19
CCNF-202ENST00000397066 ANKRD2Q9GZV1 360 aa16.21■□□□□ 0.19
CCNF-202ENST00000397066 STK17AQ9UEE5 414 aa16.21■□□□□ 0.19
CCNF-202ENST00000397066 IFFO1Q0D2I5 559 aa16.21■□□□□ 0.18
CCNF-202ENST00000397066 TCERG1LQ5VWI1 586 aa16.21■□□□□ 0.18
CCNF-202ENST00000397066 CCDC114Q96M63 670 aa16.21■□□□□ 0.18
CCNF-202ENST00000397066 BCL9O00512 1426 aa16.21■□□□□ 0.18
CCNF-202ENST00000397066 MYO1FO00160 1098 aa16.2■□□□□ 0.18
CCNF-202ENST00000397066 FKBP3Q00688 224 aaKnown RBP16.2■□□□□ 0.18
CCNF-202ENST00000397066 NBPF5PQ86XG9 351 aaPredicted RBP16.2■□□□□ 0.18
CCNF-202ENST00000397066 SPATS2Q86XZ4 545 aaKnown RBP16.2■□□□□ 0.18
CCNF-202ENST00000397066 DAGLBQ8NCG7 672 aa16.2■□□□□ 0.18
CCNF-202ENST00000397066 CABS1Q96KC9 395 aa16.2■□□□□ 0.18
CCNF-202ENST00000397066 MEFVO15553 781 aaPredicted RBP16.2■□□□□ 0.18
CCNF-202ENST00000397066 CTNNA1P35221 906 aaKnown RBP16.2■□□□□ 0.18
CCNF-202ENST00000397066 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
CCNF-202ENST00000397066 SH3GL2Q99962 352 aa16.2■□□□□ 0.18
CCNF-202ENST00000397066 FRMPD2Q68DX3 1309 aaPredicted RBP16.2■□□□□ 0.18
CCNF-202ENST00000397066 PVALEFA0A1B0GWK0 134 aa16.2■□□□□ 0.18
CCNF-202ENST00000397066 WHAMMQ8TF30 809 aa16.2■□□□□ 0.18
CCNF-202ENST00000397066 EPN3Q9H201 632 aa16.2■□□□□ 0.18
CCNF-202ENST00000397066 PANK4Q9NVE7 773 aa16.2■□□□□ 0.18
CCNF-202ENST00000397066 BCL9LQ86UU0 1499 aa16.2■□□□□ 0.18
CCNF-202ENST00000397066 HERC4Q5GLZ8 1057 aaPredicted RBP16.19■□□□□ 0.18
CCNF-202ENST00000397066 FAM26FQ5R3K3 315 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 FBXO33Q7Z6M2 555 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 PROCA1Q8NCQ7 364 aaPredicted RBP16.19■□□□□ 0.18
CCNF-202ENST00000397066 KAT2BQ92831 832 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 COA7Q96BR5 231 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 ATP6V1G3Q96LB4 118 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 ZMYND12Q9H0C1 365 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 RIC8AQ9NPQ8 531 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 CEP72Q9P209 647 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 GRIN2DO15399 1336 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 FLT1P17948 1338 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 PPP1R37O75864 691 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 CPP00450 1065 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 EPB41P11171 864 aaKnown RBP16.19■□□□□ 0.18
CCNF-202ENST00000397066 KLRC1P26715 233 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 HNRNPH3P31942 346 aaKnown RBP16.19■□□□□ 0.18
CCNF-202ENST00000397066 DDB1Q16531 1140 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 ADAMTSL3P82987 1691 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 MAP2K2P36507 400 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 ADCY7P51828 1080 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 EIF6P56537 245 aaKnown RBP16.19■□□□□ 0.18
CCNF-202ENST00000397066 GSTO1P78417 241 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 GRB10Q13322 594 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 CASKIN2Q8WXE0 1202 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 AP1M1Q9BXS5 423 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 DUOX1Q9NRD9 1551 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 DCCP43146 1447 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 SSU72P8A0A1W2PR75 194 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 FAM170AA1A519 330 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 TDP2O95551 362 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 LDHCP07864 332 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 SKOR1P84550 965 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 PRPF4BQ13523 1007 aaKnown RBP16.19■□□□□ 0.18
CCNF-202ENST00000397066 IFI16Q16666 785 aaKnown RBP16.19■□□□□ 0.18
CCNF-202ENST00000397066 NAA35Q5VZE5 725 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 NLRP14Q86W24 1093 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 JPH2Q9BR39 696 aaPredicted RBP16.19■□□□□ 0.18
CCNF-202ENST00000397066 GPCPD1Q9NPB8 672 aa16.19■□□□□ 0.18
CCNF-202ENST00000397066 ZNF233A6NK53 670 aa16.18■□□□□ 0.18
CCNF-202ENST00000397066 GIMAP7Q8NHV1 300 aa16.18■□□□□ 0.18
CCNF-202ENST00000397066 ZNF473Q8WTR7 871 aaKnown RBP16.18■□□□□ 0.18
CCNF-202ENST00000397066 RAD54LQ92698 747 aa16.18■□□□□ 0.18
CCNF-202ENST00000397066 LRRC45Q96CN5 670 aa16.18■□□□□ 0.18
CCNF-202ENST00000397066 GOPCQ9HD26 462 aa16.18■□□□□ 0.18
CCNF-202ENST00000397066 HMGB1P1B2RPK0 211 aaPredicted RBP16.18■□□□□ 0.18
CCNF-202ENST00000397066 CCT8L2Q96SF2 557 aa16.18■□□□□ 0.18
CCNF-202ENST00000397066 ATP6V0A2Q9Y487 856 aa16.18■□□□□ 0.18
CCNF-202ENST00000397066 UBR2Q8IWV8 1755 aa16.18■□□□□ 0.18
CCNF-202ENST00000397066 RAD51CO43502 376 aa16.18■□□□□ 0.18
CCNF-202ENST00000397066 KCNQ4P56696 695 aa16.18■□□□□ 0.18
CCNF-202ENST00000397066 KDM7AQ6ZMT4 941 aa16.18■□□□□ 0.18
CCNF-202ENST00000397066 SUGP1Q8IWZ8 645 aaKnown RBP16.18■□□□□ 0.18
CCNF-202ENST00000397066 GLIS3Q8NEA6 775 aa16.18■□□□□ 0.18
CCNF-202ENST00000397066 TRIM31Q9BZY9 425 aa16.18■□□□□ 0.18
CCNF-202ENST00000397066 BAZ2AQ9UIF9 1905 aaKnown RBP16.18■□□□□ 0.18
CCNF-202ENST00000397066 LOC102724159A0A0B4J2E5 919 aa16.17■□□□□ 0.18
CCNF-202ENST00000397066 MDH1P40925 334 aaKnown RBP16.17■□□□□ 0.18
CCNF-202ENST00000397066 SF3B2Q13435 895 aaKnown RBP16.17■□□□□ 0.18
CCNF-202ENST00000397066 PWP2Q15269 919 aaKnown RBP16.17■□□□□ 0.18
CCNF-202ENST00000397066 CCDC65Q8IXS2 484 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms