RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 TMEM232C9JQI7 657 aa18.67■□□□□ 0.58
SIN3A-203ENST00000394949 MIS12Q9H081 205 aa18.67■□□□□ 0.58
SIN3A-203ENST00000394949 TSPYL2Q9H2G4 693 aaPredicted RBP18.67■□□□□ 0.58
SIN3A-203ENST00000394949 PTPN22Q9Y2R2 807 aa18.67■□□□□ 0.58
SIN3A-203ENST00000394949 GMNCA6NCL1 334 aa18.67■□□□□ 0.58
SIN3A-203ENST00000394949 MAPK13O15264 365 aa18.67■□□□□ 0.58
SIN3A-203ENST00000394949 ECM2O94769 699 aaPredicted RBP18.67■□□□□ 0.58
SIN3A-203ENST00000394949 SLC12A2P55011 1212 aa18.67■□□□□ 0.58
SIN3A-203ENST00000394949 ARMCX5Q6P1M9 558 aa18.67■□□□□ 0.58
SIN3A-203ENST00000394949 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.67■□□□□ 0.58
SIN3A-203ENST00000394949 ANAPC5Q9UJX4 755 aa18.67■□□□□ 0.58
SIN3A-203ENST00000394949 MRPL11Q9Y3B7 192 aaKnown RBP18.67■□□□□ 0.58
SIN3A-203ENST00000394949 FOSP01100 380 aaPredicted RBP18.67■□□□□ 0.58
SIN3A-203ENST00000394949 POLR2BP30876 1174 aaKnown RBP18.67■□□□□ 0.58
SIN3A-203ENST00000394949 SEMA3FQ13275 785 aa18.67■□□□□ 0.58
SIN3A-203ENST00000394949 PRR16Q569H4 304 aa18.67■□□□□ 0.58
SIN3A-203ENST00000394949 DCAF15Q66K64 600 aa18.67■□□□□ 0.58
SIN3A-203ENST00000394949 FAM133AQ8N9E0 248 aa18.67■□□□□ 0.58
SIN3A-203ENST00000394949 HVCN1Q96D96 273 aa18.67■□□□□ 0.58
SIN3A-203ENST00000394949 ANKRD65E5RJM6 399 aa18.66■□□□□ 0.58
SIN3A-203ENST00000394949 FAM81BQ96LP2 452 aa18.66■□□□□ 0.58
SIN3A-203ENST00000394949 MLH3Q9UHC1 1453 aa18.66■□□□□ 0.58
SIN3A-203ENST00000394949 PODXLO00592 558 aa18.66■□□□□ 0.58
SIN3A-203ENST00000394949 DCTN3O75935 186 aa18.66■□□□□ 0.58
SIN3A-203ENST00000394949 ZNF408Q9H9D4 720 aa18.66■□□□□ 0.58
SIN3A-203ENST00000394949 ADORA1P30542 326 aa18.66■□□□□ 0.58
SIN3A-203ENST00000394949 PPP4R3CPQ6ZMV5 832 aa18.66■□□□□ 0.58
SIN3A-203ENST00000394949 ATP10DQ9P241 1426 aa18.66■□□□□ 0.58
SIN3A-203ENST00000394949 MMEP08473 750 aa18.66■□□□□ 0.58
SIN3A-203ENST00000394949 P4HA1P13674 534 aa18.66■□□□□ 0.58
SIN3A-203ENST00000394949 PHKA1P46020 1223 aa18.66■□□□□ 0.58
SIN3A-203ENST00000394949 PFDN4Q9NQP4 134 aa18.66■□□□□ 0.58
SIN3A-203ENST00000394949 K7ENM7 598 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 STAM2O75886 525 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 PTPN12Q05209 780 aaKnown RBP18.65■□□□□ 0.58
SIN3A-203ENST00000394949 GJA10Q969M2 543 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 CCDC17Q96LX7 622 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.65■□□□□ 0.58
SIN3A-203ENST00000394949 KIAA1024Q9UPX6 916 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 GRID2IPA4D2P6 1211 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 CCZ1BP86790 482 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 CCZ1P86791 482 aaPredicted RBP18.65■□□□□ 0.58
SIN3A-203ENST00000394949 PTK2Q05397 1052 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 PROSER3Q2NL68 480 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 CAPN12Q6ZSI9 719 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 SLC17A8Q8NDX2 589 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 CDKL2Q92772 493 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 GREM2Q9H772 168 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 FGFR1OP2Q9NVK5 253 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 TMEM94Q12767 1356 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 CFAP73A6NFT4 308 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 ZBTB17Q13105 803 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 LEMD3Q9Y2U8 911 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 CSADQ9Y600 493 aa18.65■□□□□ 0.58
SIN3A-203ENST00000394949 ANKRD20A4Q4UJ75 823 aa18.64■□□□□ 0.58
SIN3A-203ENST00000394949 ANKRD20A8PQ5CZ79 823 aa18.64■□□□□ 0.58
SIN3A-203ENST00000394949 ANKRD20A2Q5SQ80 823 aa18.64■□□□□ 0.58
SIN3A-203ENST00000394949 ANKRD20A1Q5TYW2 823 aa18.64■□□□□ 0.58
SIN3A-203ENST00000394949 RNF34Q969K3 372 aa18.64■□□□□ 0.58
SIN3A-203ENST00000394949 DISC1Q9NRI5 854 aa18.64■□□□□ 0.58
SIN3A-203ENST00000394949 POLE2P56282 527 aa18.64■□□□□ 0.57
SIN3A-203ENST00000394949 CERKLQ49MI3 558 aaPredicted RBP18.64■□□□□ 0.57
SIN3A-203ENST00000394949 CCDC125Q86Z20 511 aa18.64■□□□□ 0.57
SIN3A-203ENST00000394949 FAM186BQ8IYM0 893 aa18.64■□□□□ 0.57
SIN3A-203ENST00000394949 SMCR8Q8TEV9 937 aaPredicted RBP18.64■□□□□ 0.57
SIN3A-203ENST00000394949 ZNF804BA4D1E1 1349 aa18.64■□□□□ 0.57
SIN3A-203ENST00000394949 GARSP41250 739 aaKnown RBP18.64■□□□□ 0.57
SIN3A-203ENST00000394949 NUGGCQ68CJ6 796 aa18.64■□□□□ 0.57
SIN3A-203ENST00000394949 NLRP14Q86W24 1093 aa18.64■□□□□ 0.57
SIN3A-203ENST00000394949 ELAC2Q9BQ52 826 aaKnown RBP18.64■□□□□ 0.57
SIN3A-203ENST00000394949 RPAP1Q9BWH6 1393 aaPredicted RBP18.64■□□□□ 0.57
SIN3A-203ENST00000394949 TMED2Q15363 201 aa18.64■□□□□ 0.57
SIN3A-203ENST00000394949 CALR3Q96L12 384 aaKnown RBP18.64■□□□□ 0.57
SIN3A-203ENST00000394949 TSGA10IPQ3SY00 556 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 MUM1L1Q5H9M0 696 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 NT5C1BQ96P26 610 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 CENPKQ9BS16 269 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 METP08581 1390 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 PPP2R2AP63151 447 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 IQCB1Q15051 598 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 E4F1Q66K89 784 aaPredicted RBP18.63■□□□□ 0.57
SIN3A-203ENST00000394949 ALKBH5Q6P6C2 394 aaKnown RBP18.63■□□□□ 0.57
SIN3A-203ENST00000394949 TMC4Q7Z404 712 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 FBXO11Q86XK2 927 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 NCAPGQ9BPX3 1015 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 PUS3Q9BZE2 481 aaKnown RBP18.63■□□□□ 0.57
SIN3A-203ENST00000394949 BTDP43251 543 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 GLG1Q92896 1179 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 ZNF653Q96CK0 615 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 ZSWIM5Q9P217 1185 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 SLCO1A2P46721 670 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 RCAN1P53805 252 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 YWHAGP61981 247 aaKnown RBP eCLIP18.63■□□□□ 0.57
SIN3A-203ENST00000394949 KRT81Q14533 505 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 RHOT2Q8IXI1 618 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 PARP9Q8IXQ6 854 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 ATP6V1G3Q96LB4 118 aa18.63■□□□□ 0.57
SIN3A-203ENST00000394949 MAPK4P31152 587 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 MSH2P43246 934 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 ESRRGP62508 458 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms