RNA–Protein interactions for RNA: ENST00000393328.6

SPOP-202, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOP, Length 2,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-202ENST00000393328 SPICE1Q8N0Z3 855 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 TRIML1Q8N9V2 468 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 OR8K1Q8NGG5 319 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 DNAJC18Q9H819 358 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 C6orf50Q9HD87 102 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 ADAMTSL1Q8N6G6 1762 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 AARSP49588 968 aaKnown RBP eCLIP12.49□□□□□ -0.416e-7■■■□□ 14.6
SPOP-202ENST00000393328 NAALADL2Q58DX5 795 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 CCDC178Q5BJE1 867 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 TTMPQ5BVD1 217 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 TMC4Q7Z404 712 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 CCDC91Q7Z6B0 441 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 ADGRF4Q8IZF3 695 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 REXO1Q8N1G1 1221 aaKnown RBP12.49□□□□□ -0.41
SPOP-202ENST00000393328 YY1AP1Q9H869 796 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.49□□□□□ -0.41
SPOP-202ENST00000393328 CAPN6Q9Y6Q1 641 aa12.49□□□□□ -0.41
SPOP-202ENST00000393328 DDX60LQ5H9U9 1706 aaKnown RBP12.49□□□□□ -0.41
SPOP-202ENST00000393328 BUB1O43683 1085 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 PPP1R11O60927 126 aaPredicted RBP12.48□□□□□ -0.41
SPOP-202ENST00000393328 RAD17O75943 681 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 PLCG1P19174 1290 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 RXRBP28702 533 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 TRAPPC10P48553 1259 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 GABPAQ06546 454 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 SEPT2Q15019 361 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 OTUD6BQ8N6M0 293 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 SPATA20Q8TB22 786 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 TRIM47Q96LD4 638 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 POTEMA6NI47 508 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 USP17L15C9J2P7 530 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 USP17L13C9JLJ4 530 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 USP17L11C9JVI0 530 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 USP17L18D6R9N7 530 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 USP17L22D6RA61 530 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 USP17L17D6RBQ6 530 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 USP17L19D6RCP7 530 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 USP17L20D6RJB6 530 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 SLC37A4O43826 429 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 TTLL1O95922 423 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 RPN1P04843 607 aaKnown RBP12.48□□□□□ -0.41
SPOP-202ENST00000393328 HLA-DOAP06340 250 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 USP17L24Q0WX57 530 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 USP17L6PQ6QN14 398 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 SPZ1Q9BXG8 430 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 ZMYND12Q9H0C1 365 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 DISC1Q9NRI5 854 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
SPOP-202ENST00000393328 GRIN2DO15399 1336 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 EIF3HO15372 352 aaKnown RBP eCLIP12.48□□□□□ -0.41
SPOP-202ENST00000393328 FAM153BP0C7A2 387 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 FAM153CQ494X1 144 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 SH3BP5LQ7L8J4 393 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 IRF2BP1Q8IU81 584 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 NHEJ1Q9H9Q4 299 aaPredicted RBP12.48□□□□□ -0.41
SPOP-202ENST00000393328 JMJD4Q9H9V9 463 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 SH3GLB2Q9NR46 395 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 FAM153AQ9UHL3 310 aa12.48□□□□□ -0.41
SPOP-202ENST00000393328 ANKRD31Q8N7Z5 1873 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 TCP10L2B9ZVM9 353 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 PLSCR1O15162 318 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 IPO7O95373 1038 aaKnown RBP12.47□□□□□ -0.41
SPOP-202ENST00000393328 EEF2P13639 858 aaKnown RBP12.47□□□□□ -0.41
SPOP-202ENST00000393328 SCP2P22307 547 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 USH1GQ495M9 461 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 DEFB132Q7Z7B7 95 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 NEK8Q86SG6 692 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 CABP7Q86V35 215 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 CEP57Q86XR8 500 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 PPANQ9NQ55 473 aaKnown RBP12.47□□□□□ -0.41
SPOP-202ENST00000393328 MAST2Q6P0Q8 1798 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 CDK5RAP2Q96SN8 1893 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 PPIP5K2O43314 1243 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 MARCH6O60337 910 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 KIAA0754O94854 1291 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 OR52Z1P0C646 297 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 GNA11P29992 359 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 LONP1P36776 959 aaKnown RBP12.47□□□□□ -0.41
SPOP-202ENST00000393328 JAG1P78504 1218 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 IFT88Q13099 833 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 PPFIA1Q13136 1202 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 DYMQ7RTS9 669 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 MB21D1Q8N884 522 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 GSDMAQ96QA5 445 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 FAM207AQ9NSI2 230 aaPredicted RBP12.47□□□□□ -0.41
SPOP-202ENST00000393328 FAM198AQ9UFP1 575 aa12.47□□□□□ -0.41
SPOP-202ENST00000393328 PSMD14O00487 310 aa12.46□□□□□ -0.41
SPOP-202ENST00000393328 KRT86O43790 486 aa12.46□□□□□ -0.41
SPOP-202ENST00000393328 ZYXQ15942 572 aaKnown RBP12.46□□□□□ -0.41
SPOP-202ENST00000393328 CERKLQ49MI3 558 aaPredicted RBP12.46□□□□□ -0.41
SPOP-202ENST00000393328 CCDC181Q5TID7 509 aa12.46□□□□□ -0.41
SPOP-202ENST00000393328 PRMT6Q96LA8 375 aaPredicted RBP12.46□□□□□ -0.41
SPOP-202ENST00000393328 RNPC3Q96LT9 517 aaKnown RBP12.46□□□□□ -0.41
SPOP-202ENST00000393328 NUDT12Q9BQG2 462 aa12.46□□□□□ -0.41
SPOP-202ENST00000393328 HAUS4Q9H6D7 363 aa12.46□□□□□ -0.41
SPOP-202ENST00000393328 BCCIPQ9P287 314 aaKnown RBP eCLIP12.46□□□□□ -0.41
SPOP-202ENST00000393328 PPP1R1BQ9UD71 204 aaPredicted RBP12.46□□□□□ -0.41
SPOP-202ENST00000393328 NFU1Q9UMS0 254 aa12.46□□□□□ -0.41
SPOP-202ENST00000393328 PACSIN2Q9UNF0 486 aaPredicted RBP12.46□□□□□ -0.41
SPOP-202ENST00000393328 GTPBP6O43824 516 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms