RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 PMLP29590 882 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 SCNN1BP51168 640 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 LACTBP83111 547 aaPredicted RBP4.35□□□□□ -1.71
PTPRC-205ENST00000391970 LRP8Q14114 963 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 CRY1Q16526 586 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 ZNF792Q3KQV3 632 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 TIGD5Q53EQ6 642 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 ZMYM1Q5SVZ6 1142 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 OTOP1Q7RTM1 612 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 OTOP3Q7RTS5 596 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 NLRX1Q86UT6 975 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 TP53INP2Q8IXH6 220 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 LILRA2Q8N149 483 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 NXPE1Q8N323 547 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 ATL2Q8NHH9 583 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 USP7Q93009 1102 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 C19orf44Q9H6X5 657 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 IFT22Q9H7X7 185 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 CATSPERZQ9NTU4 200 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 CTNND2Q9UQB3 1225 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 ALG1L2C9J202 215 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 ZEB2O60315 1214 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 GAS7O60861 476 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 DGKIO75912 1065 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 AMY2AP04746 511 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 RAC2P15153 192 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 YBX3P16989 372 aaKnown RBP eCLIP4.34□□□□□ -1.712e-7■■□□□ 13.3
PTPRC-205ENST00000391970 AMY2BP19961 511 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 TRHRP34981 398 aaPredicted RBP4.34□□□□□ -1.71
PTPRC-205ENST00000391970 ADCYAP1R1P41586 468 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 EVA1CP58658 441 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 SPIRE1Q08AE8 756 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 STAT4Q14765 748 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 GPR19Q15760 415 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 LHFPL2Q6ZUX7 228 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 C2orf69Q8N8R5 385 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 SMC1BQ8NDV3 1235 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 USP33Q8TEY7 942 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTPRC-205ENST00000391970 SHISA4Q96DD7 197 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 TTC1Q99614 292 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 SMURF1Q9HCE7 757 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 SLC6A20Q9NP91 592 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 HOMER2Q9NSB8 354 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 GPR160Q9UJ42 338 aa4.34□□□□□ -1.71
PTPRC-205ENST00000391970 APOBEC2Q9Y235 224 aaKnown RBP4.34□□□□□ -1.71
PTPRC-205ENST00000391970 PHLDB1Q86UU1 1377 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 TCRBV5S4A2TA0A5A2 114 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 PTPDC1A2A3K4 754 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 NEMP1O14524 444 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 NKRFO15226 690 aaKnown RBP eCLIP4.33□□□□□ -1.72
PTPRC-205ENST00000391970 GPR39O43194 453 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 NTRK1P04629 796 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 PDGFRBP09619 1106 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 GLI4P10075 376 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 COL6A2P12110 1019 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 PNLIPP16233 465 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 SLC6A11P48066 632 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 JAM2P57087 298 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 CYP4F8P98187 520 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 SNX17Q15036 470 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 ARHGAP44Q17R89 818 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 PLEKHG6Q3KR16 790 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 EMC4Q5J8M3 183 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 RNF219Q5W0B1 726 aaPredicted RBP4.33□□□□□ -1.72
PTPRC-205ENST00000391970 CREB3L3Q68CJ9 461 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 HHIPL2Q6UWX4 724 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 ARHGAP36Q6ZRI8 547 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 NECAB2Q7Z6G3 386 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 FERMT3Q86UX7 667 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 CABP7Q86V35 215 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 OSTM1Q86WC4 334 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 Q8N3U1 123 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 NETO2Q8NC67 525 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 UHMK1Q8TAS1 419 aaKnown RBP4.33□□□□□ -1.72
PTPRC-205ENST00000391970 PIP4K2CQ8TBX8 421 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 WDR66Q8TBY9 1149 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 SH3RF2Q8TEC5 729 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 MYLIPQ8WY64 445 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 BOCQ9BWV1 1114 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 RC3H2Q9HBD1 1191 aaKnown RBP4.33□□□□□ -1.72
PTPRC-205ENST00000391970 TNFRSF12AQ9NP84 129 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 CRTAC1Q9NQ79 661 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 ZKSCAN5Q9Y2L8 839 aa4.33□□□□□ -1.72
PTPRC-205ENST00000391970 SCO2A0A1W2PP80 73 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 A0A1W2PQJ5 194 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 SLC12A8A0AV02 714 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 KRIT1O00522 736 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 MAN2B1O00754 1011 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 SRGAP3O43295 1099 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 HYAL3O43820 417 aaPredicted RBP4.32□□□□□ -1.72
PTPRC-205ENST00000391970 FKBP9O95302 570 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 ATP2A2P16615 1042 aaKnown RBP4.32□□□□□ -1.72
PTPRC-205ENST00000391970 KRT15P19012 456 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 ID4P47928 161 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 LSSP48449 732 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 GALK1P51570 392 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 IL2P60568 153 aa4.32□□□□□ -1.72
PTPRC-205ENST00000391970 FAM50AQ14320 339 aaKnown RBP4.32□□□□□ -1.72
PTPRC-205ENST00000391970 SART3Q15020 963 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms