RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 C3orf67Q6ZVT6 689 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 ANKRD42Q8N9B4 389 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 ACRBPQ8NEB7 543 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 KRT12Q99456 494 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 PUS7LQ9H0K6 701 aaKnown RBP9.17□□□□□ -0.94
VPS36-201ENST00000378060 EPB41L5Q9HCM4 733 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 PXDNLA1KZ92 1463 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 H0YCG3 227 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 ZBTB7AO95365 584 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 TBC1D8O95759 1140 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 PSMC4P43686 418 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 MFSD14BQ5SR56 506 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 CCDC197Q8NCU1 140 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 JDP2Q8WYK2 163 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 PAGE5Q96GU1 130 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 VPS37BQ9H9H4 285 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 USTQ9Y2C2 406 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 CASZ1Q86V15 1759 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 CYP2J2P51589 502 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 IRX4P78413 519 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 SP4Q02446 784 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 SEMA3FQ13275 785 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 NFIXQ14938 502 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 ASPRV1Q53RT3 343 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 TMED8Q6PL24 325 aaPredicted RBP9.16□□□□□ -0.94
VPS36-201ENST00000378060 CCDC17Q96LX7 622 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 ISCA1Q9BUE6 129 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 INTS9Q9NV88 658 aaKnown RBP9.16□□□□□ -0.94
VPS36-201ENST00000378060 STK32BQ9NY57 414 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 ADAM21Q9UKJ8 722 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 DAAM1Q9Y4D1 1078 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 ANO9A1A5B4 782 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 HARSP12081 509 aaKnown RBP9.16□□□□□ -0.94
VPS36-201ENST00000378060 ATP2B4P23634 1241 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 ADCY8P40145 1251 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 GLE1Q53GS7 698 aaKnown RBP9.16□□□□□ -0.94
VPS36-201ENST00000378060 OTUD6AQ7L8S5 288 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 SMYD4Q8IYR2 804 aaPredicted RBP9.16□□□□□ -0.94
VPS36-201ENST00000378060 ZNF34Q8IZ26 560 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 CCDC89Q8N998 374 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 ATP2A3Q93084 1043 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 TEKT1Q969V4 418 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 MRRFQ96E11 262 aaKnown RBP9.16□□□□□ -0.94
VPS36-201ENST00000378060 CNOT10Q9H9A5 744 aaKnown RBP9.16□□□□□ -0.94
VPS36-201ENST00000378060 PCDHB6Q9Y5E3 794 aa9.16□□□□□ -0.94
VPS36-201ENST00000378060 MORC2Q9Y6X9 1032 aaPredicted RBP9.16□□□□□ -0.94
VPS36-201ENST00000378060 LMNB2Q03252 620 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 DDR1Q08345 913 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 SNCBQ16143 134 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 USH1GQ495M9 461 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 ERFEQ4G0M1 354 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 PRR16Q569H4 304 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 DPP8Q6V1X1 898 aaPredicted RBP9.15□□□□□ -0.94
VPS36-201ENST00000378060 GRAMD1CQ8IYS0 662 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 PLCD3Q8N3E9 789 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 RDH13Q8NBN7 331 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 MICAL1Q8TDZ2 1067 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 CFAP57Q96MR6 1250 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 PLEKHA4Q9H4M7 779 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 EFCC1Q9HA90 598 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 ABCB6Q9NP58 842 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 PNMA2Q9UL42 364 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 HNRNPH2P55795 449 aaKnown RBP9.15□□□□□ -0.94
VPS36-201ENST00000378060 BPIFB4P59827 614 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 LRRC63Q05C16 580 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 ARID5BQ14865 1188 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 KRT31Q15323 416 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 TCP11X2Q5H9J9 407 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 MAP3K21Q5TCX8 1036 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 KCTD16Q68DU8 428 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 CC2D1AQ6P1N0 951 aaPredicted RBP9.15□□□□□ -0.94
VPS36-201ENST00000378060 KRT26Q7Z3Y9 468 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 AFAP1L2Q8N4X5 818 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 NHEJ1Q9H9Q4 299 aaPredicted RBP9.15□□□□□ -0.94
VPS36-201ENST00000378060 RIPOR2Q9Y4F9 1068 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 HGSO14964 777 aaPredicted RBP9.15□□□□□ -0.94
VPS36-201ENST00000378060 THAP12O43422 761 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 EVI5O60447 810 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 GAP43P17677 238 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 NR2F2P24468 414 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 EIF3BP55884 814 aaKnown RBP9.15□□□□□ -0.94
VPS36-201ENST00000378060 PPP1R21Q6ZMI0 780 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 MAEAQ7L5Y9 396 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 MGARPQ8TDB4 240 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 MAGOHBQ96A72 148 aaKnown RBP9.15□□□□□ -0.94
VPS36-201ENST00000378060 SPZ1Q9BXG8 430 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 ACTR5Q9H9F9 607 aaPredicted RBP9.15□□□□□ -0.94
VPS36-201ENST00000378060 USP40Q9NVE5 1235 aa9.15□□□□□ -0.94
VPS36-201ENST00000378060 ERVV-1B6SEH8 477 aa9.15□□□□□ -0.95
VPS36-201ENST00000378060 CD19P15391 556 aa9.15□□□□□ -0.95
VPS36-201ENST00000378060 ARL1P40616 181 aaPredicted RBP9.15□□□□□ -0.95
VPS36-201ENST00000378060 IFT88Q13099 833 aa9.15□□□□□ -0.95
VPS36-201ENST00000378060 MIER3Q7Z3K6 550 aa9.15□□□□□ -0.95
VPS36-201ENST00000378060 FBXO11Q86XK2 927 aa9.15□□□□□ -0.95
VPS36-201ENST00000378060 CCDC13Q8IYE1 715 aa9.15□□□□□ -0.95
VPS36-201ENST00000378060 SMC1BQ8NDV3 1235 aa9.15□□□□□ -0.95
VPS36-201ENST00000378060 ATF5Q9Y2D1 282 aaPredicted RBP9.15□□□□□ -0.95
VPS36-201ENST00000378060 MRPL11Q9Y3B7 192 aaKnown RBP9.15□□□□□ -0.95
VPS36-201ENST00000378060 ZBED4O75132 1171 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 LUC7L3O95232 432 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms