RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 TRAF5O00463 557 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 CDK17Q00537 523 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 COASYQ13057 564 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 KCTD1Q719H9 257 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 HAS1Q92839 578 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 TLR10Q9BXR5 811 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 TSGA10Q9BZW7 698 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 USP21Q9UK80 565 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 HNRNPH3P31942 346 aaKnown RBP22.54■■□□□ 1.2
CLN5-201ENST00000377453 TMEM266Q2M3C6 531 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 CCDC40Q4G0X9 1142 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 KRT79Q5XKE5 535 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 HGSNATQ68CP4 663 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 HAUS3Q68CZ6 603 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 GUF1Q8N442 669 aaKnown RBP22.54■■□□□ 1.2
CLN5-201ENST00000377453 GOLGA6L1Q8N7Z2 621 aa22.54■■□□□ 1.2
CLN5-201ENST00000377453 LSM14BQ9BX40 385 aaKnown RBP22.54■■□□□ 1.2
CLN5-201ENST00000377453 GOLGA6BA6NDN3 693 aa22.53■■□□□ 1.2
CLN5-201ENST00000377453 RIMBP2O15034 1052 aa22.53■■□□□ 1.2
CLN5-201ENST00000377453 CCDC181Q5TID7 509 aa22.53■■□□□ 1.2
CLN5-201ENST00000377453 PACSIN1Q9BY11 444 aa22.53■■□□□ 1.2
CLN5-201ENST00000377453 ZHX3Q9H4I2 956 aa22.53■■□□□ 1.2
CLN5-201ENST00000377453 DDX4Q9NQI0 724 aaKnown RBP22.53■■□□□ 1.2
CLN5-201ENST00000377453 MTMR4Q9NYA4 1195 aa22.53■■□□□ 1.2
CLN5-201ENST00000377453 MARCH6O60337 910 aa22.53■■□□□ 1.2
CLN5-201ENST00000377453 NOL4O94818 638 aa22.53■■□□□ 1.2
CLN5-201ENST00000377453 STAT3P40763 770 aa22.53■■□□□ 1.2
CLN5-201ENST00000377453 FXR2P51116 673 aaKnown RBP eCLIP22.53■■□□□ 1.2
CLN5-201ENST00000377453 POLR2FP61218 127 aaKnown RBP22.53■■□□□ 1.2
CLN5-201ENST00000377453 FNBP4Q8N3X1 1017 aaPredicted RBP22.53■■□□□ 1.2
CLN5-201ENST00000377453 JMJD4Q9H9V9 463 aa22.53■■□□□ 1.2
CLN5-201ENST00000377453 ZNF287Q9HBT7 754 aa22.53■■□□□ 1.2
CLN5-201ENST00000377453 POLLQ9UGP5 575 aa22.53■■□□□ 1.2
CLN5-201ENST00000377453 TAL1P17542 331 aaPredicted RBP22.52■■□□□ 1.2
CLN5-201ENST00000377453 KLHDC7AQ5VTJ3 777 aa22.52■■□□□ 1.2
CLN5-201ENST00000377453 FAM196AQ6ZSG2 479 aa22.52■■□□□ 1.2
CLN5-201ENST00000377453 ADGRF4Q8IZF3 695 aa22.52■■□□□ 1.2
CLN5-201ENST00000377453 DNAJC19Q96DA6 116 aa22.52■■□□□ 1.2
CLN5-201ENST00000377453 RPGRIP1Q96KN7 1286 aa22.52■■□□□ 1.2
CLN5-201ENST00000377453 STK17AQ9UEE5 414 aa22.52■■□□□ 1.2
CLN5-201ENST00000377453 USP17L10C9JJH3 530 aa22.52■■□□□ 1.2
CLN5-201ENST00000377453 TRADDQ15628 312 aa22.52■■□□□ 1.2
CLN5-201ENST00000377453 PRR5LQ6MZQ0 368 aa22.52■■□□□ 1.2
CLN5-201ENST00000377453 RPGRQ92834 1020 aaKnown RBP22.52■■□□□ 1.2
CLN5-201ENST00000377453 GOLPH3Q9H4A6 298 aa22.52■■□□□ 1.2
CLN5-201ENST00000377453 DDX25Q9UHL0 483 aaKnown RBP22.52■■□□□ 1.2
CLN5-201ENST00000377453 FAM184BQ9ULE4 1060 aa22.52■■□□□ 1.2
CLN5-201ENST00000377453 HYOU1Q9Y4L1 999 aa22.52■■□□□ 1.2
CLN5-201ENST00000377453 PVALEFA0A1B0GWK0 134 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 GTF2IP78347 998 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 ASTE1Q2TB18 679 aaPredicted RBP22.51■■□□□ 1.19
CLN5-201ENST00000377453 MMGT1Q8N4V1 131 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 PROCA1Q8NCQ7 364 aaPredicted RBP22.51■■□□□ 1.19
CLN5-201ENST00000377453 BCAS3Q9H6U6 928 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 DAGLAQ9Y4D2 1042 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 USP17L15C9J2P7 530 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 USP17L13C9JLJ4 530 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 USP17L11C9JVI0 530 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 USP17L18D6R9N7 530 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 USP17L22D6RA61 530 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 USP17L17D6RBQ6 530 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 USP17L19D6RCP7 530 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 USP17L20D6RJB6 530 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 MCM3P25205 808 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 USP17L24Q0WX57 530 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 TMEM119Q4V9L6 283 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 USP17L6PQ6QN14 398 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 MYOCDQ8IZQ8 938 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 ARL8AQ96BM9 186 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 PANK4Q9NVE7 773 aa22.51■■□□□ 1.19
CLN5-201ENST00000377453 POTEB3A0JP26 581 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 FAM196BA6NMK8 535 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 POTECB2RU33 542 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 C6orf229H3BNL8 230 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 SNAP25P60880 206 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 RC3H1Q5TC82 1133 aaKnown RBP22.5■■□□□ 1.19
CLN5-201ENST00000377453 POTEBQ6S5H4 581 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.5■■□□□ 1.19
CLN5-201ENST00000377453 RASSF4Q9H2L5 321 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 KIAA1024Q9UPX6 916 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 GOLGA6CA6NDK9 693 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 IVLP07476 585 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 GOLGA6DP0CG33 693 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 EHHADHQ08426 723 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 VPS72Q15906 364 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 ALS2CR12Q96Q35 445 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 GOLGA6AQ9NYA3 693 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 GGA1Q9UJY5 639 aa22.5■■□□□ 1.19
CLN5-201ENST00000377453 MPHOSPH10O00566 681 aaKnown RBP22.49■■□□□ 1.19
CLN5-201ENST00000377453 PALMO75781 387 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 FAM153BP0C7A2 387 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 ACTN1P12814 892 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 SCNN1DP51172 638 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 RAPGEF1Q13905 1077 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 FAM153CQ494X1 144 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 COBLL1Q53SF7 1204 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 FAM26FQ5R3K3 315 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 FAM83BQ5T0W9 1011 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 SH2D3CQ8N5H7 860 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 FAM153AQ9UHL3 310 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms