RNA–Protein interactions for RNA: ENST00000376227.3

CCDC22-201, Transcript of coiled-coil domain containing 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC22, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC22-201ENST00000376227 ASTE1Q2TB18 679 aaPredicted RBP16.78■□□□□ 0.28
CCDC22-201ENST00000376227 SFMBT2Q5VUG0 894 aa16.78■□□□□ 0.28
CCDC22-201ENST00000376227 ALS2CLQ60I27 953 aa16.78■□□□□ 0.28
CCDC22-201ENST00000376227 CEP63Q96MT8 703 aa16.78■□□□□ 0.28
CCDC22-201ENST00000376227 FAM107BQ9H098 131 aa16.78■□□□□ 0.28
CCDC22-201ENST00000376227 NT5C3AQ9H0P0 336 aa16.78■□□□□ 0.28
CCDC22-201ENST00000376227 PLIN4Q96Q06 1357 aa16.77■□□□□ 0.28
CCDC22-201ENST00000376227 RBAK-RBAKDNI3L0D1 243 aa16.77■□□□□ 0.28
CCDC22-201ENST00000376227 SHOX2O60902 331 aaPredicted RBP16.77■□□□□ 0.28
CCDC22-201ENST00000376227 TNNI2P48788 182 aa16.77■□□□□ 0.28
CCDC22-201ENST00000376227 RASSF7Q02833 373 aa16.77■□□□□ 0.28
CCDC22-201ENST00000376227 TBC1D22AQ8WUA7 517 aa16.77■□□□□ 0.28
CCDC22-201ENST00000376227 ARHGEF1Q92888 912 aaKnown RBP16.77■□□□□ 0.28
CCDC22-201ENST00000376227 COA7Q96BR5 231 aa16.77■□□□□ 0.28
CCDC22-201ENST00000376227 A6NNZ2 444 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 TRAF5O00463 557 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 HSF2BPO75031 334 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 GCFC2P16383 781 aaKnown RBP16.76■□□□□ 0.27
CCDC22-201ENST00000376227 GFPT1Q06210 699 aaPredicted RBP16.76■□□□□ 0.27
CCDC22-201ENST00000376227 COASYQ13057 564 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 NNTQ13423 1086 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 TUBB8Q3ZCM7 444 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 CNBD1Q8NA66 436 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 MTMR4Q9NYA4 1195 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 DDX25Q9UHL0 483 aaKnown RBP16.76■□□□□ 0.27
CCDC22-201ENST00000376227 DMGDHQ9UI17 866 aaKnown RBP16.76■□□□□ 0.27
CCDC22-201ENST00000376227 PNMA6FA0A0J9YX94 578 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 TRIM66O15016 1216 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 UFL1O94874 794 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 IL1R1P14778 569 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 FAM98CQ17RN3 349 aaKnown RBP16.76■□□□□ 0.27
CCDC22-201ENST00000376227 DNAJC21Q5F1R6 531 aaKnown RBP16.76■□□□□ 0.27
CCDC22-201ENST00000376227 FAM26FQ5R3K3 315 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 RPGRQ92834 1020 aaKnown RBP16.76■□□□□ 0.27
CCDC22-201ENST00000376227 CAVIN3Q969G5 261 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 PANK4Q9NVE7 773 aa16.76■□□□□ 0.27
CCDC22-201ENST00000376227 CCNL1Q9UK58 526 aaPredicted RBP16.76■□□□□ 0.27
CCDC22-201ENST00000376227 CXCR5P32302 372 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 RFC4P35249 363 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 MRPL12P52815 198 aaKnown RBP16.75■□□□□ 0.27
CCDC22-201ENST00000376227 RHBDL3P58872 404 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 LRRC41Q15345 812 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 HAUS3Q68CZ6 603 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 FOXR1Q6PIV2 292 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 CCDC65Q8IXS2 484 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 IFT20Q8IY31 132 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 CUL5Q93034 780 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 PSMB7Q99436 277 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 TLR10Q9BXR5 811 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 TRIM34Q9BYJ4 488 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 GGA1Q9UJY5 639 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 DDX60LQ5H9U9 1706 aaKnown RBP16.75■□□□□ 0.27
CCDC22-201ENST00000376227 SLC1A4P43007 532 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 MAGEA9P43362 315 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 EZH2Q15910 746 aaKnown RBP16.75■□□□□ 0.27
CCDC22-201ENST00000376227 ZCWPW2Q504Y3 356 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 MFSD14BQ5SR56 506 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 FAM83BQ5T0W9 1011 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 KLHDC7AQ5VTJ3 777 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 HGSNATQ68CP4 663 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 HDAC7Q8WUI4 952 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 SH3GL2Q99962 352 aa16.75■□□□□ 0.27
CCDC22-201ENST00000376227 GAKO14976 1311 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 SLC26A4O43511 780 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 BUB1O43683 1085 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 CLSTN1O94985 981 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 SNHG28P0DPA3 235 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 EPB41P11171 864 aaKnown RBP16.74■□□□□ 0.27
CCDC22-201ENST00000376227 GPSM2P81274 684 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 KCNMA1Q12791 1236 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 ANKRD13CQ8N6S4 541 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 DNAJC19Q96DA6 116 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 MTMR8Q96EF0 704 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 GPR101Q96P66 508 aaPredicted RBP16.74■□□□□ 0.27
CCDC22-201ENST00000376227 NUDT12Q9BQG2 462 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 NLRC4Q9NPP4 1024 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 ATP6V0A2Q9Y487 856 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCDC22-201ENST00000376227 SBF2Q86WG5 1849 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 GRID2IPA4D2P6 1211 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 EPS15P42566 896 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 SLC7A5Q01650 507 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 ATP2B2Q01814 1243 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 APBA1Q02410 837 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 KCNK18Q7Z418 384 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 BBXQ8WY36 941 aaPredicted RBP16.74■□□□□ 0.27
CCDC22-201ENST00000376227 LSM14BQ9BX40 385 aaKnown RBP16.74■□□□□ 0.27
CCDC22-201ENST00000376227 CAPS2Q9BXY5 557 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 PCDHA12Q9UN75 941 aa16.74■□□□□ 0.27
CCDC22-201ENST00000376227 NCK2O43639 380 aa16.73■□□□□ 0.27
CCDC22-201ENST00000376227 TTLL1O95922 423 aa16.73■□□□□ 0.27
CCDC22-201ENST00000376227 MARSP56192 900 aaKnown RBP16.73■□□□□ 0.27
CCDC22-201ENST00000376227 HYIQ5T013 277 aa16.73■□□□□ 0.27
CCDC22-201ENST00000376227 LRRC47Q8N1G4 583 aaKnown RBP16.73■□□□□ 0.27
CCDC22-201ENST00000376227 GLT8D2Q9H1C3 349 aa16.73■□□□□ 0.27
CCDC22-201ENST00000376227 GPCPD1Q9NPB8 672 aa16.73■□□□□ 0.27
CCDC22-201ENST00000376227 SALL4Q9UJQ4 1053 aa16.73■□□□□ 0.27
CCDC22-201ENST00000376227 TNRC6CQ9HCJ0 1690 aaKnown RBP16.73■□□□□ 0.27
CCDC22-201ENST00000376227 SSBP05455 408 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCDC22-201ENST00000376227 CORO7P57737 925 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms