RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 TRAPPC11Q7Z392 1133 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 GJA10Q969M2 543 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 TMEM39BQ9GZU3 492 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.8■□□□□ 0.6
PHF1-202ENST00000374516 RWDD2AQ9UIY3 292 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 GUCA1BQ9UMX6 200 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 GDAQ9Y2T3 454 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 SYF2O95926 243 aaKnown RBP18.8■□□□□ 0.6
PHF1-202ENST00000374516 TAL1P17542 331 aaPredicted RBP18.8■□□□□ 0.6
PHF1-202ENST00000374516 AARSP49588 968 aaKnown RBP eCLIP18.8■□□□□ 0.61e-5■■□□□ 14
PHF1-202ENST00000374516 CLK2P49760 499 aaKnown RBP18.8■□□□□ 0.6
PHF1-202ENST00000374516 USP14P54578 494 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 CXCL9Q07325 125 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 SPAG1Q07617 926 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 TCP11X2Q5H9J9 407 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 PLCD3Q8N3E9 789 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 GOLGA6L1Q8N7Z2 621 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 AK8Q96MA6 479 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 MTMR9Q96QG7 549 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 TAB2Q9NYJ8 693 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 REXO2Q9Y3B8 237 aaKnown RBP18.8■□□□□ 0.6
PHF1-202ENST00000374516 SHTN1A0MZ66 631 aa18.79■□□□□ 0.6
PHF1-202ENST00000374516 EIF3CLB5ME19 914 aaKnown RBP18.79■□□□□ 0.6
PHF1-202ENST00000374516 RNF40O75150 1001 aa18.79■□□□□ 0.6
PHF1-202ENST00000374516 NDUFA10O95299 355 aa18.79■□□□□ 0.6
PHF1-202ENST00000374516 FAM151AQ8WW52 585 aa18.79■□□□□ 0.6
PHF1-202ENST00000374516 EIF3CQ99613 913 aaKnown RBP18.79■□□□□ 0.6
PHF1-202ENST00000374516 MMTAG2Q9BU76 263 aaKnown RBP18.79■□□□□ 0.6
PHF1-202ENST00000374516 TRIM10Q9UDY6 481 aa18.79■□□□□ 0.6
PHF1-202ENST00000374516 USH1GQ495M9 461 aa18.79■□□□□ 0.6
PHF1-202ENST00000374516 ANKRD20A12PQ8NF67 263 aa18.79■□□□□ 0.6
PHF1-202ENST00000374516 HERC5Q9UII4 1024 aaKnown RBP18.79■□□□□ 0.6
PHF1-202ENST00000374516 CNTNAP1P78357 1384 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 KCNJ18B7U540 433 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 ENC1O14682 589 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 KCNJ12Q14500 433 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 SPDYE2Q495Y8 402 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 GMCL1P1Q8NEA9 526 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 ACER1Q8TDN7 264 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 KBTBD4Q9NVX7 518 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 POTEMA6NI47 508 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 PRPF6O94906 941 aaKnown RBP18.78■□□□□ 0.6
PHF1-202ENST00000374516 MCM3P25205 808 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 PAK1Q13153 545 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 NBPF9Q3BBW0 867 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 ZNF658Q5TYW1 1059 aaPredicted RBP18.78■□□□□ 0.6
PHF1-202ENST00000374516 HAUS4Q9H6D7 363 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 HDAC6Q9UBN7 1215 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 LRWD1Q9UFC0 647 aa18.78■□□□□ 0.6
PHF1-202ENST00000374516 BMP3P12645 472 aa18.77■□□□□ 0.6
PHF1-202ENST00000374516 UBXN1Q04323 297 aa18.77■□□□□ 0.6
PHF1-202ENST00000374516 GMCL1Q96IK5 515 aa18.77■□□□□ 0.6
PHF1-202ENST00000374516 MMS19Q96T76 1030 aa18.77■□□□□ 0.6
PHF1-202ENST00000374516 RMND1Q9NWS8 449 aa18.77■□□□□ 0.6
PHF1-202ENST00000374516 SAR1BQ9Y6B6 198 aa18.77■□□□□ 0.6
PHF1-202ENST00000374516 PRCPP42785 496 aa18.77■□□□□ 0.59
PHF1-202ENST00000374516 CORO7P57737 925 aa18.77■□□□□ 0.59
PHF1-202ENST00000374516 MAP9Q49MG5 647 aa18.77■□□□□ 0.59
PHF1-202ENST00000374516 DALRD3Q5D0E6 543 aaKnown RBP18.77■□□□□ 0.59
PHF1-202ENST00000374516 KIAA1755Q5JYT7 1200 aa18.77■□□□□ 0.59
PHF1-202ENST00000374516 OR8K1Q8NGG5 319 aa18.77■□□□□ 0.59
PHF1-202ENST00000374516 AFAP1L1Q8TED9 768 aa18.77■□□□□ 0.59
PHF1-202ENST00000374516 NELFBQ8WX92 580 aa18.77■□□□□ 0.59
PHF1-202ENST00000374516 DDX25Q9UHL0 483 aaKnown RBP18.77■□□□□ 0.59
PHF1-202ENST00000374516 HPCAL4Q9UM19 191 aa18.77■□□□□ 0.59
PHF1-202ENST00000374516 TTC26A0AVF1 554 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 KLRC4O43908 158 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 PPFIA4O75335 1185 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 ATP1A1P05023 1023 aaKnown RBP18.75■□□□□ 0.59
PHF1-202ENST00000374516 TGFB2P61812 414 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 ORC2Q13416 577 aaPredicted RBP18.75■□□□□ 0.59
PHF1-202ENST00000374516 ZYXQ15942 572 aaKnown RBP18.75■□□□□ 0.59
PHF1-202ENST00000374516 SYDE2Q5VT97 1194 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 PAPD7Q5XG87 772 aaKnown RBP18.75■□□□□ 0.59
PHF1-202ENST00000374516 NUDT12Q9BQG2 462 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 AMNQ9BXJ7 453 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 RNF216Q9NWF9 866 aaPredicted RBP18.75■□□□□ 0.59
PHF1-202ENST00000374516 WNT10BO00744 389 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 MEIS2O14770 477 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 MARCH6O60337 910 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 SRGAP2O75044 1071 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 PDE4CQ08493 712 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 TMEM266Q2M3C6 531 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 PPP4R3AQ6IN85 833 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 AGBL3Q8NEM8 1001 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 COG1Q8WTW3 980 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 HAS1Q92839 578 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 CALML4Q96GE6 196 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 P2RX7Q99572 595 aaKnown RBP18.75■□□□□ 0.59
PHF1-202ENST00000374516 TAOK3Q9H2K8 898 aa18.75■□□□□ 0.59
PHF1-202ENST00000374516 TARSL2A2RTX5 802 aaKnown RBP18.74■□□□□ 0.59
PHF1-202ENST00000374516 FXR2P51116 673 aaKnown RBP eCLIP18.74■□□□□ 0.59
PHF1-202ENST00000374516 CCDC84Q86UT8 332 aaPredicted RBP18.74■□□□□ 0.59
PHF1-202ENST00000374516 PACS2Q86VP3 889 aa18.74■□□□□ 0.59
PHF1-202ENST00000374516 FBXO11Q86XK2 927 aa18.74■□□□□ 0.59
PHF1-202ENST00000374516 JDP2Q8WYK2 163 aa18.74■□□□□ 0.59
PHF1-202ENST00000374516 ZC3H4Q9UPT8 1303 aaKnown RBP18.74■□□□□ 0.59
PHF1-202ENST00000374516 H7C1D1 291 aa18.74■□□□□ 0.59
PHF1-202ENST00000374516 GRB10Q13322 594 aa18.74■□□□□ 0.59
PHF1-202ENST00000374516 STIM1Q13586 685 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms