RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 VIPAS39Q9H9C1 493 aa19.72■□□□□ 0.75
IFFO1-201ENST00000336604 DDX4Q9NQI0 724 aaKnown RBP19.72■□□□□ 0.75
IFFO1-201ENST00000336604 SMARCAL1Q9NZC9 954 aa19.72■□□□□ 0.75
IFFO1-201ENST00000336604 GFPT1Q06210 699 aaPredicted RBP19.72■□□□□ 0.75
IFFO1-201ENST00000336604 TMEM119Q4V9L6 283 aa19.72■□□□□ 0.75
IFFO1-201ENST00000336604 NFRKBQ6P4R8 1299 aa19.72■□□□□ 0.75
IFFO1-201ENST00000336604 TBC1D7Q9P0N9 293 aa19.72■□□□□ 0.75
IFFO1-201ENST00000336604 DDX25Q9UHL0 483 aaKnown RBP19.72■□□□□ 0.75
IFFO1-201ENST00000336604 ZC3H4Q9UPT8 1303 aaKnown RBP19.72■□□□□ 0.75
IFFO1-201ENST00000336604 FGFR1OPO95684 399 aaKnown RBP19.71■□□□□ 0.75
IFFO1-201ENST00000336604 SSBP05455 408 aaKnown RBP eCLIP19.71■□□□□ 0.75
IFFO1-201ENST00000336604 CCNI2Q6ZMN8 369 aaPredicted RBP19.71■□□□□ 0.75
IFFO1-201ENST00000336604 PACS2Q86VP3 889 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 SELENOOQ9BVL4 669 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 FGFBP2Q9BYJ0 223 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 RIC8AQ9NPQ8 531 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 LCA5LO95447 670 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 SLURP2P0DP57 97 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 AARSP49588 968 aaKnown RBP eCLIP19.71■□□□□ 0.75
IFFO1-201ENST00000336604 CACNA2D4Q7Z3S7 1137 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 CERKQ8TCT0 537 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 TBC1D22AQ8WUA7 517 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 DNAJC19Q96DA6 116 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 KANSL2Q9H9L4 492 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 NLRC4Q9NPP4 1024 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 LRRC4BQ9NT99 713 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 EHD2Q9NZN4 543 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 PLIN4Q96Q06 1357 aa19.71■□□□□ 0.75
IFFO1-201ENST00000336604 PNMA6FA0A0J9YX94 578 aa19.7■□□□□ 0.74
IFFO1-201ENST00000336604 MATR3P43243 847 aaKnown RBP eCLIP19.7■□□□□ 0.74
IFFO1-201ENST00000336604 ZNF543Q08ER8 600 aa19.7■□□□□ 0.74
IFFO1-201ENST00000336604 KCNMA1Q12791 1236 aa19.7■□□□□ 0.74
IFFO1-201ENST00000336604 COASYQ13057 564 aa19.7■□□□□ 0.74
IFFO1-201ENST00000336604 PPP4R3AQ6IN85 833 aa19.7■□□□□ 0.74
IFFO1-201ENST00000336604 MYOCDQ8IZQ8 938 aa19.7■□□□□ 0.74
IFFO1-201ENST00000336604 ABCB11O95342 1321 aa19.7■□□□□ 0.74
IFFO1-201ENST00000336604 NCK2O43639 380 aa19.7■□□□□ 0.74
IFFO1-201ENST00000336604 MARCH6O60337 910 aa19.7■□□□□ 0.74
IFFO1-201ENST00000336604 TTLL1O95922 423 aa19.7■□□□□ 0.74
IFFO1-201ENST00000336604 MAGEA1P43355 309 aa19.7■□□□□ 0.74
IFFO1-201ENST00000336604 TTC31Q49AM3 519 aaPredicted RBP19.7■□□□□ 0.74
IFFO1-201ENST00000336604 OSBPL9Q96SU4 736 aa19.7■□□□□ 0.74
IFFO1-201ENST00000336604 LRRC1Q9BTT6 524 aa19.7■□□□□ 0.74
IFFO1-201ENST00000336604 IGKV6D-41A0A0C4DH26 115 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 TRAF5O00463 557 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 RIMBP2O15034 1052 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 GGCXP38435 758 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 CACNB1Q02641 598 aaPredicted RBP19.69■□□□□ 0.74
IFFO1-201ENST00000336604 RASSF7Q02833 373 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 IQCEQ6IPM2 695 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.69■□□□□ 0.74
IFFO1-201ENST00000336604 KCTD1Q719H9 257 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 SPATA4Q8NEY3 305 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 RBM17Q96I25 401 aaKnown RBP19.69■□□□□ 0.74
IFFO1-201ENST00000336604 TSG101Q99816 390 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 DMGDHQ9UI17 866 aaKnown RBP19.69■□□□□ 0.74
IFFO1-201ENST00000336604 PRPF6O94906 941 aaKnown RBP19.69■□□□□ 0.74
IFFO1-201ENST00000336604 SERPINB2P05120 415 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 SLC1A4P43007 532 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 CLK2P49760 499 aaKnown RBP19.69■□□□□ 0.74
IFFO1-201ENST00000336604 APBA1Q02410 837 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 ZCWPW2Q504Y3 356 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 ICE2Q659A1 982 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 PDXDC1Q6P996 788 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 MTMR8Q96EF0 704 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 PCDHA12Q9UN75 941 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 USP17L10C9JJH3 530 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 BUB1O43683 1085 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 PSMD2Q13200 908 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 ASTE1Q2TB18 679 aaPredicted RBP19.69■□□□□ 0.74
IFFO1-201ENST00000336604 TDRD12Q587J7 1177 aaKnown RBP19.69■□□□□ 0.74
IFFO1-201ENST00000336604 HGSNATQ68CP4 663 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 NELFCDQ8IXH7 590 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 CUL5Q93034 780 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 CRACR2AQ9BSW2 395 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 PANK4Q9NVE7 773 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 SERPINB13Q9UIV8 391 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 COL4A3BPQ9Y5P4 624 aa19.69■□□□□ 0.74
IFFO1-201ENST00000336604 E9PMD0 336 aa19.68■□□□□ 0.74
IFFO1-201ENST00000336604 GYS1P13807 737 aa19.68■□□□□ 0.74
IFFO1-201ENST00000336604 FKBP3Q00688 224 aaKnown RBP19.68■□□□□ 0.74
IFFO1-201ENST00000336604 SLC7A5Q01650 507 aa19.68■□□□□ 0.74
IFFO1-201ENST00000336604 FAM26FQ5R3K3 315 aa19.68■□□□□ 0.74
IFFO1-201ENST00000336604 TMC4Q7Z404 712 aa19.68■□□□□ 0.74
IFFO1-201ENST00000336604 ALS2CR12Q96Q35 445 aa19.68■□□□□ 0.74
IFFO1-201ENST00000336604 MXD3Q9BW11 206 aa19.68■□□□□ 0.74
IFFO1-201ENST00000336604 NPHP3-ACAD11A0A0J9YXS1 232 aa19.68■□□□□ 0.74
IFFO1-201ENST00000336604 CCDC40Q4G0X9 1142 aa19.68■□□□□ 0.74
IFFO1-201ENST00000336604 PSTPIP2Q9H939 334 aa19.68■□□□□ 0.74
IFFO1-201ENST00000336604 MYH10P35580 1976 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 AGPSO00116 658 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 MPHOSPH10O00566 681 aaKnown RBP19.67■□□□□ 0.74
IFFO1-201ENST00000336604 MAGEA9P43362 315 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 MMGT1Q8N4V1 131 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 LRRC27Q9C0I9 530 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 KIAA1024Q9UPX6 916 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 USP17L15C9J2P7 530 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 USP17L13C9JLJ4 530 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 USP17L11C9JVI0 530 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 USP17L18D6R9N7 530 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms