RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 ACTR5Q9H9F9 607 aaPredicted RBP18.88■□□□□ 0.61
PRKCD-201ENST00000330452 ARPP21Q9UBL0 812 aaPredicted RBP18.88■□□□□ 0.61
PRKCD-201ENST00000330452 OPLAHO14841 1288 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 MFAP3LO75121 409 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 GYPCP04921 128 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 IFFO1Q0D2I5 559 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 IFT88Q13099 833 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 KRT31Q15323 416 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 DBN1Q16643 649 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 KIAA0825Q8IV33 1275 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 GDAP1L1Q96MZ0 367 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 CTAGE1Q96RT6 745 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 VPS16Q9H269 839 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 IL17RBQ9NRM6 502 aa18.88■□□□□ 0.61
PRKCD-201ENST00000330452 TNRC6CQ9HCJ0 1690 aaKnown RBP18.88■□□□□ 0.61
PRKCD-201ENST00000330452 OPA1O60313 960 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 SKOR1P84550 965 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 TUBB2AQ13885 445 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 TYW1BQ6NUM6 668 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 GORASP1Q9BQQ3 440 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 TUBB2BQ9BVA1 445 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 GDAQ9Y2T3 454 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 THSD7AQ9UPZ6 1657 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 BUB1BO60566 1050 aaPredicted RBP18.87■□□□□ 0.61
PRKCD-201ENST00000330452 SERPINB2P05120 415 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 GNPTABQ3T906 1256 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 LRRC23Q53EV4 343 aaPredicted RBP18.87■□□□□ 0.61
PRKCD-201ENST00000330452 TBC1D31Q96DN5 1066 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 TSC22D3Q99576 134 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 C15orf41Q9Y2V0 281 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 CASZ1Q86V15 1759 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 RNF225M0QZC1 329 aaPredicted RBP18.87■□□□□ 0.61
PRKCD-201ENST00000330452 N4BP3O15049 544 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 GTPBP6O43824 516 aaPredicted RBP18.87■□□□□ 0.61
PRKCD-201ENST00000330452 TRAPPC10P48553 1259 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 SBK1Q52WX2 424 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 DZIP1Q86YF9 867 aaKnown RBP18.87■□□□□ 0.61
PRKCD-201ENST00000330452 BLIDQ8IZY5 108 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 C4orf32Q8N8J7 132 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 TAB2Q9NYJ8 693 aa18.87■□□□□ 0.61
PRKCD-201ENST00000330452 DLEC1Q9Y238 1755 aa18.86■□□□□ 0.61
PRKCD-201ENST00000330452 MGRN1O60291 552 aa18.86■□□□□ 0.61
PRKCD-201ENST00000330452 TRIM4Q9C037 500 aa18.86■□□□□ 0.61
PRKCD-201ENST00000330452 USP17L3A6NCW0 530 aa18.86■□□□□ 0.61
PRKCD-201ENST00000330452 USP17L4A6NCW7 530 aa18.86■□□□□ 0.61
PRKCD-201ENST00000330452 B4DLN1 442 aa18.86■□□□□ 0.61
PRKCD-201ENST00000330452 KIF5BP33176 963 aa18.86■□□□□ 0.61
PRKCD-201ENST00000330452 GPSM2P81274 684 aa18.86■□□□□ 0.61
PRKCD-201ENST00000330452 ACBD5Q5T8D3 534 aaPredicted RBP18.86■□□□□ 0.61
PRKCD-201ENST00000330452 USP17L1Q7RTZ2 530 aa18.86■□□□□ 0.61
PRKCD-201ENST00000330452 PNMA1Q8ND90 353 aa18.86■□□□□ 0.61
PRKCD-201ENST00000330452 ZNF473Q8WTR7 871 aaKnown RBP18.86■□□□□ 0.61
PRKCD-201ENST00000330452 NELFBQ8WX92 580 aa18.86■□□□□ 0.61
PRKCD-201ENST00000330452 ZNF219Q9P2Y4 722 aaPredicted RBP18.86■□□□□ 0.61
PRKCD-201ENST00000330452 A6NHS1 94 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 A6NNZ2 444 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 PP2D1A8MPX8 630 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 ONECUT3O60422 494 aaPredicted RBP18.85■□□□□ 0.61
PRKCD-201ENST00000330452 PAK1Q13153 545 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 TXNRD1Q16881 649 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 TUBB8Q3ZCM7 444 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 ZFAND2BQ8WV99 257 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 RPGRQ92834 1020 aaKnown RBP18.85■□□□□ 0.61
PRKCD-201ENST00000330452 ANKRD2Q9GZV1 360 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 IQCGQ9H095 443 aaKnown RBP18.85■□□□□ 0.61
PRKCD-201ENST00000330452 MYO1AQ9UBC5 1043 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 GOLGA6BA6NDN3 693 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 LIN7AO14910 233 aaPredicted RBP18.85■□□□□ 0.61
PRKCD-201ENST00000330452 RIMBP2O15034 1052 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 ABL1P00519 1130 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 RPN1P04843 607 aaKnown RBP18.85■□□□□ 0.61
PRKCD-201ENST00000330452 SLC35G1Q2M3R5 365 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 C6orf89Q6UWU4 347 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 GALNT15Q8N3T1 639 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 ZNF570Q96NI8 536 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 PLIN2Q99541 437 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 NAA15Q9BXJ9 866 aaKnown RBP18.85■□□□□ 0.61
PRKCD-201ENST00000330452 NOD2Q9HC29 1040 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 RWDD2AQ9UIY3 292 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 GGA2Q9UJY4 613 aa18.85■□□□□ 0.61
PRKCD-201ENST00000330452 ATP6V1G1O75348 118 aa18.84■□□□□ 0.61
PRKCD-201ENST00000330452 PRCPP42785 496 aa18.84■□□□□ 0.61
PRKCD-201ENST00000330452 SLC44A5Q8NCS7 719 aa18.84■□□□□ 0.61
PRKCD-201ENST00000330452 SH3RF3Q8TEJ3 882 aaPredicted RBP18.84■□□□□ 0.61
PRKCD-201ENST00000330452 DNAAF2Q9NVR5 837 aaKnown RBP18.84■□□□□ 0.61
PRKCD-201ENST00000330452 LIMA1Q9UHB6 759 aaKnown RBP18.84■□□□□ 0.61
PRKCD-201ENST00000330452 ATP6V1G2O95670 118 aa18.84■□□□□ 0.61
PRKCD-201ENST00000330452 STAT6P42226 847 aa18.84■□□□□ 0.61
PRKCD-201ENST00000330452 COPB1P53618 953 aaKnown RBP18.84■□□□□ 0.61
PRKCD-201ENST00000330452 ZNF658Q5TYW1 1059 aaPredicted RBP18.84■□□□□ 0.61
PRKCD-201ENST00000330452 C12orf60Q5U649 245 aa18.84■□□□□ 0.61
PRKCD-201ENST00000330452 SDCCAG8Q86SQ7 713 aaPredicted RBP18.84■□□□□ 0.61
PRKCD-201ENST00000330452 TMEM60Q9H2L4 133 aa18.84■□□□□ 0.61
PRKCD-201ENST00000330452 PCDHA4Q9UN74 947 aa18.84■□□□□ 0.61
PRKCD-201ENST00000330452 NHSQ6T4R5 1651 aa18.83■□□□□ 0.61
PRKCD-201ENST00000330452 PDS5AQ29RF7 1337 aaKnown RBP18.83■□□□□ 0.61
PRKCD-201ENST00000330452 TRIM49BA6NDI0 452 aa18.83■□□□□ 0.61
PRKCD-201ENST00000330452 CALML3P27482 149 aa18.83■□□□□ 0.61
PRKCD-201ENST00000330452 ERVK-24P63145 666 aa18.83■□□□□ 0.61
PRKCD-201ENST00000330452 BLMHQ13867 455 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms