RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 KRT83P78385 493 aa13.48□□□□□ -0.25
SEC24A-201ENST00000322887 GUCY2DQ02846 1103 aa13.48□□□□□ -0.25
SEC24A-201ENST00000322887 TRIM14Q14142 442 aa13.48□□□□□ -0.25
SEC24A-201ENST00000322887 ARHGAP27Q6ZUM4 889 aa13.48□□□□□ -0.25
SEC24A-201ENST00000322887 DYNLL2Q96FJ2 89 aa13.48□□□□□ -0.25
SEC24A-201ENST00000322887 RIOK1Q9BRS2 568 aaKnown RBP13.48□□□□□ -0.25
SEC24A-201ENST00000322887 ZNRF3Q9ULT6 936 aa13.48□□□□□ -0.25
SEC24A-201ENST00000322887 IPO7O95373 1038 aaKnown RBP13.48□□□□□ -0.25
SEC24A-201ENST00000322887 KIF11P52732 1056 aa13.48□□□□□ -0.25
SEC24A-201ENST00000322887 VAV2P52735 878 aa13.48□□□□□ -0.25
SEC24A-201ENST00000322887 ASIC1P78348 528 aa13.48□□□□□ -0.25
SEC24A-201ENST00000322887 HDLBPQ00341 1268 aaKnown RBP13.48□□□□□ -0.25
SEC24A-201ENST00000322887 CKAP4Q07065 602 aaKnown RBP13.48□□□□□ -0.25
SEC24A-201ENST00000322887 RNF187Q5TA31 235 aaPredicted RBP13.48□□□□□ -0.25
SEC24A-201ENST00000322887 STRIP1Q5VSL9 837 aa13.48□□□□□ -0.25
SEC24A-201ENST00000322887 MCTP2Q6DN12 878 aa13.48□□□□□ -0.25
SEC24A-201ENST00000322887 NIM1KQ8IY84 436 aa13.48□□□□□ -0.25
SEC24A-201ENST00000322887 EPB41L5Q9HCM4 733 aa13.48□□□□□ -0.25
SEC24A-201ENST00000322887 ZNHIT6Q9NWK9 470 aaKnown RBP13.48□□□□□ -0.25
SEC24A-201ENST00000322887 G3V3G9 751 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 UBA7P41226 1012 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 CCDC181Q5TID7 509 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 DDX42Q86XP3 938 aaKnown RBP eCLIP13.47□□□□□ -0.25
SEC24A-201ENST00000322887 TMTC2Q8N394 836 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 JDP2Q8WYK2 163 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 SEMA6BQ9H3T3 888 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 RNF41Q9H4P4 317 aaPredicted RBP13.47□□□□□ -0.25
SEC24A-201ENST00000322887 AKR1B10O60218 316 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 ACTN3Q08043 901 aaPredicted RBP13.47□□□□□ -0.25
SEC24A-201ENST00000322887 GPR162Q16538 588 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 HEATR3Q7Z4Q2 680 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 KIAA0895Q8NCT3 520 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 SH3GL2Q99962 352 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 TLR10Q9BXR5 811 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 SH2D4AQ9H788 454 aa13.47□□□□□ -0.25
SEC24A-201ENST00000322887 COL4A5P29400 1685 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 USP17L3A6NCW0 530 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 USP17L4A6NCW7 530 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 PSMA7O14818 248 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 CPP00450 1065 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 TECP42680 631 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 MMP14P50281 582 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 DNM2P50570 870 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 SPA17Q15506 151 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 DTHD1Q6ZMT9 781 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 USP17L1Q7RTZ2 530 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 IQCA1Q86XH1 822 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 KLHL7Q8IXQ5 586 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 SLC44A5Q8NCS7 719 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 PURBQ96QR8 312 aaKnown RBP13.46□□□□□ -0.25
SEC24A-201ENST00000322887 PACSIN1Q9BY11 444 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 PPANQ9NQ55 473 aaKnown RBP13.46□□□□□ -0.25
SEC24A-201ENST00000322887 STIM2Q9P246 746 aa13.46□□□□□ -0.25
SEC24A-201ENST00000322887 SHTN1A0MZ66 631 aa13.46□□□□□ -0.26
SEC24A-201ENST00000322887 H0YHG0 523 aa13.46□□□□□ -0.26
SEC24A-201ENST00000322887 FZD9O00144 591 aa13.46□□□□□ -0.26
SEC24A-201ENST00000322887 PRELPP51888 382 aa13.46□□□□□ -0.26
SEC24A-201ENST00000322887 ZBED6P86452 979 aa13.46□□□□□ -0.26
SEC24A-201ENST00000322887 DOK7Q18PE1 504 aa13.46□□□□□ -0.26
SEC24A-201ENST00000322887 SPTY2D1Q68D10 685 aaPredicted RBP13.46□□□□□ -0.26
SEC24A-201ENST00000322887 C8orf74Q6P047 294 aa13.46□□□□□ -0.26
SEC24A-201ENST00000322887 KIRREL3Q8IZU9 778 aa13.46□□□□□ -0.26
SEC24A-201ENST00000322887 BLIDQ8IZY5 108 aa13.46□□□□□ -0.26
SEC24A-201ENST00000322887 GIMAP8Q8ND71 665 aaPredicted RBP13.46□□□□□ -0.26
SEC24A-201ENST00000322887 PIK3R5Q8WYR1 880 aa13.46□□□□□ -0.26
SEC24A-201ENST00000322887 FAM212AQ96EL1 285 aa13.46□□□□□ -0.26
SEC24A-201ENST00000322887 RUFY1Q96T51 708 aa13.46□□□□□ -0.26
SEC24A-201ENST00000322887 KRT12Q99456 494 aa13.46□□□□□ -0.26
SEC24A-201ENST00000322887 MYO3BQ8WXR4 1341 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 USP17L8P0C7I0 530 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 LETM2Q2VYF4 491 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 P2RX5Q93086 422 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 NCAPGQ9BPX3 1015 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 DBNDD1Q9H9R9 158 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 PSME4Q14997 1843 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 TIAM2Q8IVF5 1701 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 A0A1W2PQC6 194 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 YDJCA8MPS7 323 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 HEXIM1O94992 359 aaKnown RBP13.45□□□□□ -0.26
SEC24A-201ENST00000322887 EEF1GP26641 437 aaKnown RBP13.45□□□□□ -0.26
SEC24A-201ENST00000322887 IFT88Q13099 833 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 PFKFB3Q16875 520 aaPredicted RBP13.45□□□□□ -0.26
SEC24A-201ENST00000322887 VAT1LQ9HCJ6 419 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 RMND1Q9NWS8 449 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 TBC1D7Q9P0N9 293 aa13.45□□□□□ -0.26
SEC24A-201ENST00000322887 DICER1Q9UPY3 1922 aaKnown RBP13.44□□□□□ -0.26
SEC24A-201ENST00000322887 TSPY2A6NKD2 308 aa13.44□□□□□ -0.26
SEC24A-201ENST00000322887 CYTH3O43739 400 aa13.44□□□□□ -0.26
SEC24A-201ENST00000322887 TMOD1P28289 359 aa13.44□□□□□ -0.26
SEC24A-201ENST00000322887 LSP1P33241 339 aa13.44□□□□□ -0.26
SEC24A-201ENST00000322887 TDRD12Q587J7 1177 aaKnown RBP13.44□□□□□ -0.26
SEC24A-201ENST00000322887 CT47A1Q5JQC4 288 aaPredicted RBP13.44□□□□□ -0.26
SEC24A-201ENST00000322887 RCSD1Q6JBY9 416 aa13.44□□□□□ -0.26
SEC24A-201ENST00000322887 CASKIN2Q8WXE0 1202 aa13.44□□□□□ -0.26
SEC24A-201ENST00000322887 THAP9Q9H5L6 903 aa13.44□□□□□ -0.26
SEC24A-201ENST00000322887 PCDHA6Q9UN73 950 aa13.44□□□□□ -0.26
SEC24A-201ENST00000322887 PCDHA8Q9Y5H6 950 aa13.44□□□□□ -0.26
SEC24A-201ENST00000322887 ZNF646O15015 1829 aaPredicted RBP13.44□□□□□ -0.26
SEC24A-201ENST00000322887 DOCK2Q92608 1830 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms