RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 USP17L20D6RJB6 530 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 TRAF5O00463 557 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 USP17L24Q0WX57 530 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 NFRKBQ6P4R8 1299 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 USP17L6PQ6QN14 398 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.76■□□□□ 0.27
CSDC2-201ENST00000306149 TMC4Q7Z404 712 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 SH2D4AQ9H788 454 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 PNMA6FA0A0J9YX94 578 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 PDIA5Q14554 519 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 ENOX2Q16206 610 aaKnown RBP16.76■□□□□ 0.27
CSDC2-201ENST00000306149 DOK7Q18PE1 504 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 COBLL1Q53SF7 1204 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 CACNA2D4Q7Z3S7 1137 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 CREG2Q8IUH2 290 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 CERKQ8TCT0 537 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 TBC1D22AQ8WUA7 517 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 IQCDQ96DY2 449 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 USP40Q9NVE5 1235 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 FEZ2Q9UHY8 353 aaPredicted RBP16.76■□□□□ 0.27
CSDC2-201ENST00000306149 SERPINB13Q9UIV8 391 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 PCDHA12Q9UN75 941 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 BUB1O43683 1085 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 USO1O60763 962 aaKnown RBP16.75■□□□□ 0.27
CSDC2-201ENST00000306149 TTLL1O95922 423 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 SNHG28P0DPA3 235 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 KCNMA1Q12791 1236 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 COASYQ13057 564 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 BAP1Q92560 729 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 DNAJC19Q96DA6 116 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 RIC8AQ9NPQ8 531 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 SNX12Q9UMY4 172 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 TACC1O75410 805 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 HNRNPH3P31942 346 aaKnown RBP16.75■□□□□ 0.27
CSDC2-201ENST00000306149 MAGEA1P43355 309 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 DNA2P51530 1060 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 SLC7A5Q01650 507 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 RASSF7Q02833 373 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 TMEM119Q4V9L6 283 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 MYOCDQ8IZQ8 938 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 TSGA10Q9BZW7 698 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 FAM204AQ9H8W3 233 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 KIAA1024Q9UPX6 916 aa16.75■□□□□ 0.27
CSDC2-201ENST00000306149 VGLL3A8MV65 326 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 BBOX1O75936 387 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 SYF2O95926 243 aaKnown RBP16.74■□□□□ 0.27
CSDC2-201ENST00000306149 ARID5AQ03989 594 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 LRRC63Q05C16 580 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 EHHADHQ08426 723 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 CCDC40Q4G0X9 1142 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 TDRD12Q587J7 1177 aaKnown RBP16.74■□□□□ 0.27
CSDC2-201ENST00000306149 CCDC84Q86UT8 332 aaPredicted RBP16.74■□□□□ 0.27
CSDC2-201ENST00000306149 TRIM58Q8NG06 486 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 ZHX3Q9H4I2 956 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 PSTPIP2Q9H939 334 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 PANK4Q9NVE7 773 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 HPCAL4Q9UM19 191 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 JRKLQ9Y4A0 524 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 TAF1LQ8IZX4 1826 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 IGKV6D-41A0A0C4DH26 115 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 SHMT1P34896 483 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 STAT3P40763 770 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 SLC1A4P43007 532 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 CACNB3P54284 484 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 NAP1L1P55209 391 aaKnown RBP16.74■□□□□ 0.27
CSDC2-201ENST00000306149 DDR1Q08345 913 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 ORC2Q13416 577 aaPredicted RBP16.74■□□□□ 0.27
CSDC2-201ENST00000306149 ZFPM1Q8IX07 1006 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 CUL5Q93034 780 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 LRRC1Q9BTT6 524 aa16.74■□□□□ 0.27
CSDC2-201ENST00000306149 DMGDHQ9UI17 866 aaKnown RBP16.74■□□□□ 0.27
CSDC2-201ENST00000306149 ZC3H4Q9UPT8 1303 aaKnown RBP16.73■□□□□ 0.27
CSDC2-201ENST00000306149 RNF40O75150 1001 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 SNAP25P60880 206 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 NFIAQ12857 509 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 IQCEQ6IPM2 695 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 CCNI2Q6ZMN8 369 aaPredicted RBP16.73■□□□□ 0.27
CSDC2-201ENST00000306149 TSG101Q99816 390 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 MYH7BA7E2Y1 1941 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 POTEB3A0JP26 581 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 POTECB2RU33 542 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 hCG_1984214I3L0E3 225 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 FAM26FQ5R3K3 315 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 PPP4R3AQ6IN85 833 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 FOXR1Q6PIV2 292 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 POTEBQ6S5H4 581 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 SRLQ86TD4 932 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 FNBP4Q8N3X1 1017 aaPredicted RBP16.73■□□□□ 0.27
CSDC2-201ENST00000306149 ZNF713Q8N859 430 aaPredicted RBP16.73■□□□□ 0.27
CSDC2-201ENST00000306149 MTMR8Q96EF0 704 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 SELENOOQ9BVL4 669 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 PLEKHA4Q9H4M7 779 aa16.73■□□□□ 0.27
CSDC2-201ENST00000306149 PRPF6O94906 941 aaKnown RBP16.72■□□□□ 0.27
CSDC2-201ENST00000306149 FGFR1OPO95684 399 aaKnown RBP16.72■□□□□ 0.27
CSDC2-201ENST00000306149 CLK2P49760 499 aaKnown RBP16.72■□□□□ 0.27
CSDC2-201ENST00000306149 PDXDC1Q6P996 788 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 OSBPL9Q96SU4 736 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 POLD4Q9HCU8 107 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 PCDHAC2Q9Y5I4 1007 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 TOM1O60784 492 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms