RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 RGPD3A6NKT7 1758 aaPredicted RBP22.21■■□□□ 1.15
CXCL16-201ENST00000293778 RGPD4Q7Z3J3 1758 aa22.21■■□□□ 1.15
CXCL16-201ENST00000293778 SPDYE3A6NKU9 549 aa22.21■■□□□ 1.15
CXCL16-201ENST00000293778 C21orf2O43822 256 aa22.21■■□□□ 1.15
CXCL16-201ENST00000293778 FOSP01100 380 aaPredicted RBP22.21■■□□□ 1.15
CXCL16-201ENST00000293778 RXRBP28702 533 aa22.21■■□□□ 1.15
CXCL16-201ENST00000293778 STAT3P40763 770 aa22.21■■□□□ 1.15
CXCL16-201ENST00000293778 KRT83P78385 493 aa22.21■■□□□ 1.15
CXCL16-201ENST00000293778 PRR16Q569H4 304 aa22.21■■□□□ 1.15
CXCL16-201ENST00000293778 BTNL9Q6UXG8 535 aa22.21■■□□□ 1.15
CXCL16-201ENST00000293778 SRGAP1Q7Z6B7 1085 aa22.21■■□□□ 1.15
CXCL16-201ENST00000293778 RABGGTAQ92696 567 aa22.21■■□□□ 1.15
CXCL16-201ENST00000293778 HAUS4Q9H6D7 363 aa22.21■■□□□ 1.15
CXCL16-201ENST00000293778 TMOD2Q9NZR1 351 aa22.21■■□□□ 1.15
CXCL16-201ENST00000293778 CYLC1P35663 651 aaPredicted RBP22.2■■□□□ 1.14
CXCL16-201ENST00000293778 HERVK_113P62684 666 aa22.2■■□□□ 1.14
CXCL16-201ENST00000293778 CCDC65Q8IXS2 484 aa22.2■■□□□ 1.14
CXCL16-201ENST00000293778 CEP112Q8N8E3 955 aa22.2■■□□□ 1.14
CXCL16-201ENST00000293778 ETNPPLQ8TBG4 499 aa22.2■■□□□ 1.14
CXCL16-201ENST00000293778 EPC1Q9H2F5 836 aa22.2■■□□□ 1.14
CXCL16-201ENST00000293778 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.2■■□□□ 1.14
CXCL16-201ENST00000293778 GUCA1BQ9UMX6 200 aa22.2■■□□□ 1.14
CXCL16-201ENST00000293778 A0A1W2PRG0 241 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 MMP14P50281 582 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 GPBP1Q86WP2 473 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 FAM53CQ9NYF3 392 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 HERC5Q9UII4 1024 aaKnown RBP22.19■■□□□ 1.14
CXCL16-201ENST00000293778 SYNPO2Q9UMS6 1093 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 TBX3O15119 743 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 MED24O75448 989 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 SREBF1P36956 1147 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 CHMP4BP1P59074 171 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 Q4G0T1 1027 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 HAUS3Q68CZ6 603 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 TMCO3Q6UWJ1 677 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 CCDC170Q8IYT3 715 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 NHEJ1Q9H9Q4 299 aaPredicted RBP22.19■■□□□ 1.14
CXCL16-201ENST00000293778 TRIM10Q9UDY6 481 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 SIK3Q9Y2K2 1263 aa22.19■■□□□ 1.14
CXCL16-201ENST00000293778 TCP10L2B9ZVM9 353 aa22.18■■□□□ 1.14
CXCL16-201ENST00000293778 BMS1Q14692 1282 aaKnown RBP22.18■■□□□ 1.14
CXCL16-201ENST00000293778 ZCWPW2Q504Y3 356 aa22.18■■□□□ 1.14
CXCL16-201ENST00000293778 SPICE1Q8N0Z3 855 aa22.18■■□□□ 1.14
CXCL16-201ENST00000293778 KRT222Q8N1A0 295 aa22.18■■□□□ 1.14
CXCL16-201ENST00000293778 PRDM10Q9NQV6 1147 aa22.18■■□□□ 1.14
CXCL16-201ENST00000293778 IPO7O95373 1038 aaKnown RBP22.18■■□□□ 1.14
CXCL16-201ENST00000293778 CDK17Q00537 523 aa22.18■■□□□ 1.14
CXCL16-201ENST00000293778 SPIRE1Q08AE8 756 aa22.18■■□□□ 1.14
CXCL16-201ENST00000293778 CCDC84Q86UT8 332 aaPredicted RBP22.18■■□□□ 1.14
CXCL16-201ENST00000293778 ERMNQ8TAM6 284 aa22.18■■□□□ 1.14
CXCL16-201ENST00000293778 ZSWIM4Q9H7M6 989 aa22.18■■□□□ 1.14
CXCL16-201ENST00000293778 STK32BQ9NY57 414 aa22.18■■□□□ 1.14
CXCL16-201ENST00000293778 PUF60Q9UHX1 559 aaKnown RBP22.18■■□□□ 1.14
CXCL16-201ENST00000293778 PRR12Q9ULL5 1215 aa22.18■■□□□ 1.14
CXCL16-201ENST00000293778 SPDYE2BA6NHP3 402 aa22.17■■□□□ 1.14
CXCL16-201ENST00000293778 EIF3CLB5ME19 914 aaKnown RBP22.17■■□□□ 1.14
CXCL16-201ENST00000293778 SPDYE6P0CI01 402 aa22.17■■□□□ 1.14
CXCL16-201ENST00000293778 TAL1P17542 331 aaPredicted RBP22.17■■□□□ 1.14
CXCL16-201ENST00000293778 CYP11B2P19099 503 aa22.17■■□□□ 1.14
CXCL16-201ENST00000293778 CCDC122Q5T0U0 273 aa22.17■■□□□ 1.14
CXCL16-201ENST00000293778 KIAA1328Q86T90 577 aa22.17■■□□□ 1.14
CXCL16-201ENST00000293778 LENG9Q96B70 501 aa22.17■■□□□ 1.14
CXCL16-201ENST00000293778 EIF3CQ99613 913 aaKnown RBP22.17■■□□□ 1.14
CXCL16-201ENST00000293778 ARHGEF10LQ9HCE6 1279 aa22.17■■□□□ 1.14
CXCL16-201ENST00000293778 TBC1D7Q9P0N9 293 aa22.17■■□□□ 1.14
CXCL16-201ENST00000293778 NPHP3-ACAD11A0A0J9YXS1 232 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 CLRN2A0PK11 232 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 POTEFA5A3E0 1075 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 OPLAHO14841 1288 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 POTEIP0CG38 1075 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 FKBP3Q00688 224 aaKnown RBP22.16■■□□□ 1.14
CXCL16-201ENST00000293778 NCAPH2Q6IBW4 605 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 RSBN1LQ6PCB5 846 aaPredicted RBP22.16■■□□□ 1.14
CXCL16-201ENST00000293778 POTEGQ6S5H5 508 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 POTEEQ6S8J3 1075 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 ZNF662Q6ZS27 426 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 FAM207AQ9NSI2 230 aaPredicted RBP22.16■■□□□ 1.14
CXCL16-201ENST00000293778 FAM86B1E9PN63 330 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 KRT18P05783 430 aaKnown RBP22.16■■□□□ 1.14
CXCL16-201ENST00000293778 FAM86B2P0C5J1 330 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 HOXA13P31271 388 aaPredicted RBP22.16■■□□□ 1.14
CXCL16-201ENST00000293778 CACNB1Q02641 598 aaPredicted RBP22.16■■□□□ 1.14
CXCL16-201ENST00000293778 EZH2Q15910 746 aaKnown RBP22.16■■□□□ 1.14
CXCL16-201ENST00000293778 HERC4Q5GLZ8 1057 aaPredicted RBP22.16■■□□□ 1.14
CXCL16-201ENST00000293778 CATSPER3Q86XQ3 398 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 FGFBP2Q9BYJ0 223 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 MMRN2Q9H8L6 949 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 PCDHA2Q9Y5H9 948 aa22.16■■□□□ 1.14
CXCL16-201ENST00000293778 TRAF5O00463 557 aa22.15■■□□□ 1.14
CXCL16-201ENST00000293778 ZRANB2O95218 330 aaKnown RBP eCLIP22.15■■□□□ 1.14
CXCL16-201ENST00000293778 ZSCAN20P17040 1043 aaPredicted RBP22.15■■□□□ 1.14
CXCL16-201ENST00000293778 ECE1P42892 770 aa22.15■■□□□ 1.14
CXCL16-201ENST00000293778 SLC12A3P55017 1021 aa22.15■■□□□ 1.14
CXCL16-201ENST00000293778 JAKMIP2Q96AA8 810 aa22.15■■□□□ 1.14
CXCL16-201ENST00000293778 FAM20AQ96MK3 541 aa22.15■■□□□ 1.14
CXCL16-201ENST00000293778 COL4A3BPQ9Y5P4 624 aa22.15■■□□□ 1.14
CXCL16-201ENST00000293778 FHOD1Q9Y613 1164 aa22.15■■□□□ 1.14
CXCL16-201ENST00000293778 EPHB6O15197 1021 aa22.15■■□□□ 1.14
CXCL16-201ENST00000293778 KRT86O43790 486 aa22.15■■□□□ 1.14
CXCL16-201ENST00000293778 HNRNPH3P31942 346 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms