RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ZNF131P52739 623 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 RHBDL3P58872 404 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 HHATQ5VTY9 493 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 MPHOSPH6Q99547 160 aaKnown RBP13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 MTMR6Q9Y217 621 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 PCDHAC2Q9Y5I4 1007 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 CASQ2O14958 399 aaPredicted RBP13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 TBC1D12O60347 775 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 SETSIPP0DME0 302 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 VPS52Q8N1B4 723 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 GPT2Q8TD30 523 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 CAPS2Q9BXY5 557 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 TRIM31Q9BZY9 425 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 FAM198AQ9UFP1 575 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 MAPK8IP1Q9UQF2 711 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 CCDC88AQ3V6T2 1871 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 DICER1Q9UPY3 1922 aaKnown RBP13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 JAK2O60674 1132 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 ZBTB48P10074 688 aaPredicted RBP13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 TCP1P17987 556 aaKnown RBP13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 KLHL30Q0D2K2 578 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 TRIML1Q8N9V2 468 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 HOMER3Q9NSC5 361 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 ASIC3Q9UHC3 531 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 HIP1RO75146 1068 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 ARL1P40616 181 aaPredicted RBP13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 WDR78Q5VTH9 848 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 RPUSD2Q8IZ73 545 aaKnown RBP13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 KANSL2Q9H9L4 492 aa13.01□□□□□ -0.33
SYNGAP1-201ENST00000293748 ICA1Q05084 483 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 PPATQ06203 517 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 DENND2CQ68D51 928 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 RIOK1Q9BRS2 568 aaKnown RBP13□□□□□ -0.33
SYNGAP1-201ENST00000293748 USH1CQ9Y6N9 552 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 CCL15-CCL14A0A0B4J2E2 113 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 CCL15Q16663 113 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 LONRF3Q496Y0 759 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 SBK1Q52WX2 424 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 HAUS3Q68CZ6 603 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 PEX26Q7Z412 305 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 SDCCAG8Q86SQ7 713 aaPredicted RBP13□□□□□ -0.33
SYNGAP1-201ENST00000293748 NELFBQ8WX92 580 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 ZFYVE28Q9HCC9 887 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 HYOU1Q9Y4L1 999 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 C19orf81C9J6K1 198 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 M0R2C6 588 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 CXCL11O14625 94 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 PRKAB2O43741 272 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 ADKP55263 362 aaKnown RBP13□□□□□ -0.33
SYNGAP1-201ENST00000293748 ME3Q16798 604 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 CYP4F22Q6NT55 531 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 PIK3AP1Q6ZUJ8 805 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 STX10O60499 249 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 CDC25BP30305 580 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 GCKP35557 465 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 ANKRD20A3Q5VUR7 823 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 OPTNQ96CV9 577 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 GLT8D2Q9H1C3 349 aa13□□□□□ -0.33
SYNGAP1-201ENST00000293748 PPANQ9NQ55 473 aaKnown RBP13□□□□□ -0.33
SYNGAP1-201ENST00000293748 RGS16O15492 202 aaPredicted RBP12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 CALUO43852 315 aaPredicted RBP12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 NR1I2O75469 434 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 GMNNO75496 209 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 PARP1P09874 1014 aaKnown RBP12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 PPIL2Q13356 520 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 UAP1Q16222 522 aaPredicted RBP12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 SFMBT2Q5VUG0 894 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 PHLDB3Q6NSJ2 640 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 SAPCD2Q86UD0 394 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 MAIP1Q8WWC4 291 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 V9GY48 417 aaPredicted RBP12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 COL4A5P29400 1685 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 SBF1O95248 1867 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 GDF11O95390 407 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 PFKFB1P16118 471 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 TRMT44Q8IYL2 757 aaKnown RBP12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 ZKSCAN3Q9BRR0 538 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 CTNNA1P35221 906 aaKnown RBP12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 CDK8P49336 464 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 LIG3P49916 1009 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 LIN9Q5TKA1 542 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 USP17L2Q6R6M4 530 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 KLRG1Q96E93 195 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 ZNF274Q96GC6 653 aaPredicted RBP12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 WNK4Q96J92 1243 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 PSMB7Q99436 277 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 PYCARDQ9ULZ3 195 aa12.99□□□□□ -0.33
SYNGAP1-201ENST00000293748 A0A0D9SFI3 127 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 DDTLA6NHG4 134 aaPredicted RBP12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 USP17L10C9JJH3 530 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 CMA1P23946 247 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 LGSNQ5TDP6 509 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 ZNF280CQ8ND82 737 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 RAB3IPQ96QF0 476 aaPredicted RBP12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 CTTNBP2NLQ9P2B4 639 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 GAS8O95995 478 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 GH2P01242 217 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 CAP2P40123 477 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 TAF1CQ15572 869 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms