RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 GRXCR2A6NFK2 248 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 PARNO95453 639 aaKnown RBP16.1■□□□□ 0.17
DDX39A-201ENST00000242776 CFBP00751 764 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 MYCLP12524 364 aaPredicted RBP16.1■□□□□ 0.17
DDX39A-201ENST00000242776 RBL2Q08999 1139 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 ALX1Q15699 326 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 MFSD6Q6ZSS7 791 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 ADGRF4Q8IZF3 695 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 ANKS1AQ92625 1134 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 KATNAL1Q9BW62 490 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 LNPKQ9C0E8 428 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 HELLSQ9NRZ9 838 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 ABCB11O95342 1321 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 ATG2AQ2TAZ0 1938 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 DOCK5Q9H7D0 1870 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 NEDD4P46934 1319 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 EFCAB14O75071 495 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 SNHG28P0DPA3 235 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 HSPD1P10809 573 aaKnown RBP16.09■□□□□ 0.17
DDX39A-201ENST00000242776 MRE11P49959 708 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 NMIQ13287 307 aaPredicted RBP16.09■□□□□ 0.17
DDX39A-201ENST00000242776 GPM6BQ13491 265 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 CLUL1Q15846 466 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 MCMDC2Q4G0Z9 681 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 EPC2Q52LR7 807 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 TCEAL5Q5H9L2 206 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 EVI5LQ96CN4 794 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 MRPL38Q96DV4 380 aaKnown RBP16.09■□□□□ 0.17
DDX39A-201ENST00000242776 YME1L1Q96TA2 773 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 OSBPL7Q9BZF2 842 aa16.09■□□□□ 0.17
DDX39A-201ENST00000242776 RSPH10B2B2RC85 870 aa16.08■□□□□ 0.16
DDX39A-201ENST00000242776 F2P00734 622 aa16.08■□□□□ 0.16
DDX39A-201ENST00000242776 CTSHP09668 335 aa16.08■□□□□ 0.16
DDX39A-201ENST00000242776 RSPH10BP0C881 870 aa16.08■□□□□ 0.16
DDX39A-201ENST00000242776 ALADP13716 330 aa16.08■□□□□ 0.16
DDX39A-201ENST00000242776 PTPROQ16827 1216 aa16.08■□□□□ 0.16
DDX39A-201ENST00000242776 QRICH1Q2TAL8 776 aa16.08■□□□□ 0.16
DDX39A-201ENST00000242776 GPATCH4Q5T3I0 446 aaKnown RBP16.08■□□□□ 0.16
DDX39A-201ENST00000242776 BANK1Q8NDB2 785 aa16.08■□□□□ 0.16
DDX39A-201ENST00000242776 RGS22Q8NE09 1264 aa16.08■□□□□ 0.16
DDX39A-201ENST00000242776 TTC14Q96N46 770 aa16.08■□□□□ 0.16
DDX39A-201ENST00000242776 PXMP2Q9NR77 195 aa16.08■□□□□ 0.16
DDX39A-201ENST00000242776 HAS3O00219 553 aa16.07■□□□□ 0.16
DDX39A-201ENST00000242776 NR3C2P08235 984 aa16.07■□□□□ 0.16
DDX39A-201ENST00000242776 LAMC2Q13753 1193 aa16.07■□□□□ 0.16
DDX39A-201ENST00000242776 FBXO11Q86XK2 927 aa16.07■□□□□ 0.16
DDX39A-201ENST00000242776 MCF2L2Q86YR7 1114 aa16.07■□□□□ 0.16
DDX39A-201ENST00000242776 PNMA1Q8ND90 353 aa16.07■□□□□ 0.16
DDX39A-201ENST00000242776 PPTC7Q8NI37 304 aa16.07■□□□□ 0.16
DDX39A-201ENST00000242776 SPATA33Q96N06 139 aa16.07■□□□□ 0.16
DDX39A-201ENST00000242776 IWS1Q96ST2 819 aa16.07■□□□□ 0.16
DDX39A-201ENST00000242776 KAT14Q9H8E8 782 aa16.07■□□□□ 0.16
DDX39A-201ENST00000242776 CLDND1Q9NY35 253 aa16.07■□□□□ 0.16
DDX39A-201ENST00000242776 DCXO43602 365 aa16.06■□□□□ 0.16
DDX39A-201ENST00000242776 EIF3JO75822 258 aaKnown RBP16.06■□□□□ 0.16
DDX39A-201ENST00000242776 HSDL1Q3SXM5 330 aa16.06■□□□□ 0.16
DDX39A-201ENST00000242776 NEK9Q8TD19 979 aa16.06■□□□□ 0.16
DDX39A-201ENST00000242776 FBXL18Q96ME1 805 aa16.06■□□□□ 0.16
DDX39A-201ENST00000242776 CTNNA3Q9UI47 895 aa16.06■□□□□ 0.16
DDX39A-201ENST00000242776 MRPL11Q9Y3B7 192 aaKnown RBP16.06■□□□□ 0.16
DDX39A-201ENST00000242776 PIEZO1Q92508 2521 aa16.06■□□□□ 0.16
DDX39A-201ENST00000242776 C5orf42Q9H799 3197 aa16.06■□□□□ 0.16
DDX39A-201ENST00000242776 SALL3Q9BXA9 1300 aa16.05■□□□□ 0.16
DDX39A-201ENST00000242776 TRIM6-TRIM34B2RNG4 842 aa16.05■□□□□ 0.16
DDX39A-201ENST00000242776 GGPS1O95749 300 aa16.05■□□□□ 0.16
DDX39A-201ENST00000242776 HOXA13P31271 388 aaPredicted RBP16.05■□□□□ 0.16
DDX39A-201ENST00000242776 HTRA4P83105 476 aaPredicted RBP16.05■□□□□ 0.16
DDX39A-201ENST00000242776 NHLH1Q02575 133 aa16.05■□□□□ 0.16
DDX39A-201ENST00000242776 TIGD5Q53EQ6 642 aa16.05■□□□□ 0.16
DDX39A-201ENST00000242776 TMEM192Q8IY95 271 aa16.05■□□□□ 0.16
DDX39A-201ENST00000242776 ESR2Q92731 530 aa16.05■□□□□ 0.16
DDX39A-201ENST00000242776 GPKOWQ92917 476 aaPredicted RBP eCLIP16.05■□□□□ 0.168e-6■■□□□ 13.6
DDX39A-201ENST00000242776 ATP6V0A1Q93050 837 aa16.05■□□□□ 0.16
DDX39A-201ENST00000242776 RILPL2Q969X0 211 aa16.05■□□□□ 0.16
DDX39A-201ENST00000242776 WDFY4Q6ZS81 3184 aa16.05■□□□□ 0.16
DDX39A-201ENST00000242776 CCDC171Q6TFL3 1326 aa16.05■□□□□ 0.16
DDX39A-201ENST00000242776 EMSYQ7Z589 1322 aa16.05■□□□□ 0.16
DDX39A-201ENST00000242776 C17orf102A2RUQ5 167 aa16.04■□□□□ 0.16
DDX39A-201ENST00000242776 TREHO43280 583 aa16.04■□□□□ 0.16
DDX39A-201ENST00000242776 KDM4AO75164 1064 aa16.04■□□□□ 0.16
DDX39A-201ENST00000242776 PLEKHG4Q58EX7 1191 aa16.04■□□□□ 0.16
DDX39A-201ENST00000242776 MYSM1Q5VVJ2 828 aa16.04■□□□□ 0.16
DDX39A-201ENST00000242776 SP7Q8TDD2 431 aaPredicted RBP16.04■□□□□ 0.16
DDX39A-201ENST00000242776 EMID1Q96A84 441 aaPredicted RBP16.04■□□□□ 0.16
DDX39A-201ENST00000242776 BCAS3Q9H6U6 928 aa16.04■□□□□ 0.16
DDX39A-201ENST00000242776 JMJD4Q9H9V9 463 aa16.04■□□□□ 0.16
DDX39A-201ENST00000242776 RALGAPA2Q2PPJ7 1873 aa16.04■□□□□ 0.16
DDX39A-201ENST00000242776 B4E1Z4 1266 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 H3BNC9 293 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 RGS20O76081 388 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 CTNNB1P35222 781 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 SP2Q02086 613 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 ZP2Q05996 745 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 PUS10Q3MIT2 529 aaKnown RBP16.03■□□□□ 0.16
DDX39A-201ENST00000242776 CELF3Q5SZQ8 465 aaKnown RBP16.03■□□□□ 0.16
DDX39A-201ENST00000242776 RPAINQ86UA6 219 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 SERINC5Q86VE9 423 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 IL31RAQ8NI17 732 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 SEPT8Q92599 483 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 PABPC5Q96DU9 382 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms