RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 ZNF18P17022 549 aa25.41■■□□□ 1.66
CDX1-201ENST00000231656 ARHGAP4P98171 946 aa25.41■■□□□ 1.66
CDX1-201ENST00000231656 CALCRLQ16602 461 aa25.41■■□□□ 1.66
CDX1-201ENST00000231656 PPP4R3AQ6IN85 833 aa25.41■■□□□ 1.66
CDX1-201ENST00000231656 CABP7Q86V35 215 aa25.41■■□□□ 1.66
CDX1-201ENST00000231656 SPATC1LQ9H0A9 340 aa25.41■■□□□ 1.66
CDX1-201ENST00000231656 SPTLC3Q9NUV7 552 aa25.41■■□□□ 1.66
CDX1-201ENST00000231656 PPP1R3GB7ZBB8 358 aa25.4■■□□□ 1.66
CDX1-201ENST00000231656 CYP2C8P10632 490 aa25.4■■□□□ 1.66
CDX1-201ENST00000231656 RPS6P62753 249 aaKnown RBP25.4■■□□□ 1.66
CDX1-201ENST00000231656 RIOX2Q8IUF8 465 aa25.4■■□□□ 1.66
CDX1-201ENST00000231656 TRMT44Q8IYL2 757 aaKnown RBP25.4■■□□□ 1.66
CDX1-201ENST00000231656 LRRC15Q8TF66 581 aa25.4■■□□□ 1.66
CDX1-201ENST00000231656 PTPN18Q99952 460 aa25.4■■□□□ 1.66
CDX1-201ENST00000231656 COL20A1Q9P218 1284 aa25.4■■□□□ 1.66
CDX1-201ENST00000231656 IMPACTQ9P2X3 320 aa25.4■■□□□ 1.66
CDX1-201ENST00000231656 RBPJLQ9UBG7 517 aa25.4■■□□□ 1.66
CDX1-201ENST00000231656 NFE2L3Q9Y4A8 694 aa25.4■■□□□ 1.66
CDX1-201ENST00000231656 TMEM88BA6NKF7 163 aa25.39■■□□□ 1.66
CDX1-201ENST00000231656 YY1P25490 414 aa25.39■■□□□ 1.66
CDX1-201ENST00000231656 TECP42680 631 aa25.39■■□□□ 1.66
CDX1-201ENST00000231656 FXR2P51116 673 aaKnown RBP eCLIP25.39■■□□□ 1.66
CDX1-201ENST00000231656 NOLC1Q14978 699 aaKnown RBP eCLIP25.39■■□□□ 1.66
CDX1-201ENST00000231656 NSMFQ6X4W1 530 aa25.39■■□□□ 1.66
CDX1-201ENST00000231656 RNF207Q6ZRF8 634 aa25.39■■□□□ 1.66
CDX1-201ENST00000231656 C17orf53Q8N3J3 647 aaPredicted RBP25.39■■□□□ 1.66
CDX1-201ENST00000231656 ACAD9Q9H845 621 aa25.39■■□□□ 1.66
CDX1-201ENST00000231656 TXNRD2Q9NNW7 524 aa25.39■■□□□ 1.66
CDX1-201ENST00000231656 RABGAP1Q9Y3P9 1069 aa25.39■■□□□ 1.66
CDX1-201ENST00000231656 TESPA1A2RU30 521 aaPredicted RBP25.39■■□□□ 1.65
CDX1-201ENST00000231656 GCFC2P16383 781 aaKnown RBP25.39■■□□□ 1.65
CDX1-201ENST00000231656 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.39■■□□□ 1.65
CDX1-201ENST00000231656 RASSF8Q8NHQ8 419 aa25.39■■□□□ 1.65
CDX1-201ENST00000231656 SYTL5Q8TDW5 730 aaPredicted RBP25.39■■□□□ 1.65
CDX1-201ENST00000231656 NAP1L4Q99733 375 aaKnown RBP25.39■■□□□ 1.65
CDX1-201ENST00000231656 MMTAG2Q9BU76 263 aaKnown RBP25.39■■□□□ 1.65
CDX1-201ENST00000231656 CUEDC2Q9H467 287 aa25.39■■□□□ 1.65
CDX1-201ENST00000231656 KBTBD4Q9NVX7 518 aa25.39■■□□□ 1.65
CDX1-201ENST00000231656 CBFA2T2O43439 604 aa25.38■■□□□ 1.65
CDX1-201ENST00000231656 RPN1P04843 607 aaKnown RBP25.38■■□□□ 1.65
CDX1-201ENST00000231656 SLC10A3P09131 477 aa25.38■■□□□ 1.65
CDX1-201ENST00000231656 ARID5BQ14865 1188 aa25.38■■□□□ 1.65
CDX1-201ENST00000231656 SLC30A10Q6XR72 485 aa25.38■■□□□ 1.65
CDX1-201ENST00000231656 FILIP1Q7Z7B0 1213 aa25.38■■□□□ 1.65
CDX1-201ENST00000231656 LRRC8AQ8IWT6 810 aa25.38■■□□□ 1.65
CDX1-201ENST00000231656 ZNF784Q8NCA9 323 aaPredicted RBP25.38■■□□□ 1.65
CDX1-201ENST00000231656 CHST13Q8NET6 341 aa25.38■■□□□ 1.65
CDX1-201ENST00000231656 EHMT1Q9H9B1 1298 aa25.38■■□□□ 1.65
CDX1-201ENST00000231656 MAGEF1Q9HAY2 307 aa25.38■■□□□ 1.65
CDX1-201ENST00000231656 ABT1Q9ULW3 272 aaKnown RBP25.38■■□□□ 1.65
CDX1-201ENST00000231656 CYP3A7-CYP3A51PA0A087WV96 503 aa25.37■■□□□ 1.65
CDX1-201ENST00000231656 SERPINC1P01008 464 aa25.37■■□□□ 1.65
CDX1-201ENST00000231656 MYL1P05976 194 aa25.37■■□□□ 1.65
CDX1-201ENST00000231656 PLCG1P19174 1290 aa25.37■■□□□ 1.65
CDX1-201ENST00000231656 CYP3A7P24462 503 aa25.37■■□□□ 1.65
CDX1-201ENST00000231656 TXKP42681 527 aa25.37■■□□□ 1.65
CDX1-201ENST00000231656 UBASH3AP57075 661 aa25.37■■□□□ 1.65
CDX1-201ENST00000231656 FSTL1Q12841 308 aa25.37■■□□□ 1.65
CDX1-201ENST00000231656 MOXD1Q6UVY6 613 aa25.37■■□□□ 1.65
CDX1-201ENST00000231656 SMYD4Q8IYR2 804 aaPredicted RBP25.37■■□□□ 1.65
CDX1-201ENST00000231656 RMND1Q9NWS8 449 aa25.37■■□□□ 1.65
CDX1-201ENST00000231656 DDX25Q9UHL0 483 aaKnown RBP25.37■■□□□ 1.65
CDX1-201ENST00000231656 CYP3A4P08684 503 aa25.36■■□□□ 1.65
CDX1-201ENST00000231656 BAATQ14032 418 aaPredicted RBP25.36■■□□□ 1.65
CDX1-201ENST00000231656 SMCR8Q8TEV9 937 aaPredicted RBP25.36■■□□□ 1.65
CDX1-201ENST00000231656 PLIN2Q99541 437 aa25.36■■□□□ 1.65
CDX1-201ENST00000231656 MOV10L1Q9BXT6 1211 aaKnown RBP25.36■■□□□ 1.65
CDX1-201ENST00000231656 SYNRGQ9UMZ2 1314 aa25.36■■□□□ 1.65
CDX1-201ENST00000231656 MANSC4A6NHS7 340 aaPredicted RBP25.36■■□□□ 1.65
CDX1-201ENST00000231656 GSDMDP57764 484 aa25.36■■□□□ 1.65
CDX1-201ENST00000231656 Q3C1V9 767 aa25.36■■□□□ 1.65
CDX1-201ENST00000231656 TMC6Q7Z403 805 aa25.36■■□□□ 1.65
CDX1-201ENST00000231656 GTF3C2Q8WUA4 911 aaPredicted RBP25.36■■□□□ 1.65
CDX1-201ENST00000231656 MBOAT7Q96N66 472 aa25.36■■□□□ 1.65
CDX1-201ENST00000231656 MAF1Q9H063 256 aa25.36■■□□□ 1.65
CDX1-201ENST00000231656 A1CFQ9NQ94 594 aaKnown RBP25.36■■□□□ 1.65
CDX1-201ENST00000231656 FAM155AB1AL88 458 aaPredicted RBP25.35■■□□□ 1.65
CDX1-201ENST00000231656 CIITAP33076 1130 aa25.35■■□□□ 1.65
CDX1-201ENST00000231656 UBXN2AP68543 259 aa25.35■■□□□ 1.65
CDX1-201ENST00000231656 ZNF658Q5TYW1 1059 aaPredicted RBP25.35■■□□□ 1.65
CDX1-201ENST00000231656 SPATA1Q5VX52 437 aa25.35■■□□□ 1.65
CDX1-201ENST00000231656 NAP1L5Q96NT1 182 aaPredicted RBP25.35■■□□□ 1.65
CDX1-201ENST00000231656 TAAR1Q96RJ0 339 aa25.35■■□□□ 1.65
CDX1-201ENST00000231656 CYP39A1Q9NYL5 469 aa25.35■■□□□ 1.65
CDX1-201ENST00000231656 FBXO40Q9UH90 709 aa25.35■■□□□ 1.65
CDX1-201ENST00000231656 RPTORQ8N122 1335 aa25.35■■□□□ 1.65
CDX1-201ENST00000231656 PDIA5Q14554 519 aa25.34■■□□□ 1.65
CDX1-201ENST00000231656 TMEM266Q2M3C6 531 aa25.34■■□□□ 1.65
CDX1-201ENST00000231656 KLHL10Q6JEL2 608 aa25.34■■□□□ 1.65
CDX1-201ENST00000231656 NCAPG2Q86XI2 1143 aa25.34■■□□□ 1.65
CDX1-201ENST00000231656 CCDC102AQ96A19 550 aa25.34■■□□□ 1.65
CDX1-201ENST00000231656 HHIPL1Q96JK4 782 aa25.34■■□□□ 1.65
CDX1-201ENST00000231656 SAMSN1Q9NSI8 373 aaKnown RBP25.34■■□□□ 1.65
CDX1-201ENST00000231656 FAM86B1E9PN63 330 aa25.33■■□□□ 1.65
CDX1-201ENST00000231656 KLRC4O43908 158 aa25.33■■□□□ 1.65
CDX1-201ENST00000231656 SLC25A27O95847 323 aa25.33■■□□□ 1.65
CDX1-201ENST00000231656 FAM86B2P0C5J1 330 aa25.33■■□□□ 1.65
CDX1-201ENST00000231656 ERVK-9P63128 1117 aa25.33■■□□□ 1.65
CDX1-201ENST00000231656 ERVK-24P63145 666 aa25.33■■□□□ 1.65
CDX1-201ENST00000231656 KCNB1Q14721 858 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms