RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 FBXO40Q9UH90 709 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 FARP1Q9Y4F1 1045 aaPredicted RBP5.71□□□□□ -1.5
KRR1-201ENST00000229214 CCDC189A1A4V9 331 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 CFAP73A6NFT4 308 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 CES2O00748 559 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 TXNDC9O14530 226 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 SYT1P21579 422 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 PPP2R1AP30153 589 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 PDE4DQ08499 809 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 CSTF3Q12996 717 aaKnown RBP5.71□□□□□ -1.5
KRR1-201ENST00000229214 RCN2Q14257 317 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 NEK5Q6P3R8 708 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 CCDC126Q96EE4 140 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 WDR11Q9BZH6 1224 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 MFHAS1Q9Y4C4 1052 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 COL4A3BPQ9Y5P4 624 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 GRIN2AQ12879 1464 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 GAS2O43903 313 aaKnown RBP5.71□□□□□ -1.5
KRR1-201ENST00000229214 USP14P54578 494 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 IRX1P78414 480 aaPredicted RBP5.71□□□□□ -1.5
KRR1-201ENST00000229214 GIMAP6Q6P9H5 292 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 SYDE1Q6ZW31 735 aaPredicted RBP5.71□□□□□ -1.5
KRR1-201ENST00000229214 C16orf71Q8IYS4 520 aaPredicted RBP5.71□□□□□ -1.5
KRR1-201ENST00000229214 ZNF622Q969S3 477 aaKnown RBP eCLIP5.71□□□□□ -1.51e-7■■■□□ 16.8
KRR1-201ENST00000229214 EDC4Q6P2E9 1401 aaKnown RBP5.71□□□□□ -1.5
KRR1-201ENST00000229214 SMIM23A6NLE4 172 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 ST13P50502 369 aaKnown RBP5.71□□□□□ -1.5
KRR1-201ENST00000229214 YARSP54577 528 aaKnown RBP5.71□□□□□ -1.5
KRR1-201ENST00000229214 DCUN1D2Q6PH85 259 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 AADATQ8N5Z0 425 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 MYH14Q7Z406 1995 aaKnown RBP5.71□□□□□ -1.5
KRR1-201ENST00000229214 PSMD3O43242 534 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 GDF11O95390 407 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 HSPA1LP34931 641 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 RNF187Q5TA31 235 aaPredicted RBP5.71□□□□□ -1.5
KRR1-201ENST00000229214 CMTM5Q96DZ9 223 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 EFCC1Q9HA90 598 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 ATP8A2Q9NTI2 1148 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 AMFRQ9UKV5 643 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 KDM5CP41229 1560 aa5.71□□□□□ -1.5
KRR1-201ENST00000229214 GRM8O00222 908 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 MAP2K2P36507 400 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 ADCY2Q08462 1091 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 HERC4Q5GLZ8 1057 aaPredicted RBP5.7□□□□□ -1.5
KRR1-201ENST00000229214 SETDB2Q96T68 719 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 CYP26B1Q9NR63 512 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 STARD13Q9Y3M8 1113 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 PDE6AP16499 860 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 SERPINB6P35237 376 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 NEK10Q6ZWH5 1172 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 SUGP1Q8IWZ8 645 aaKnown RBP5.7□□□□□ -1.5
KRR1-201ENST00000229214 REXO1Q8N1G1 1221 aaKnown RBP5.7□□□□□ -1.5
KRR1-201ENST00000229214 MYRIPQ8NFW9 859 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 TBC1D32Q96NH3 1257 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.7□□□□□ -1.5
KRR1-201ENST00000229214 RECQLP46063 649 aaPredicted RBP5.7□□□□□ -1.5
KRR1-201ENST00000229214 RAD51Q06609 339 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 FLIIQ13045 1269 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 STARD8Q92502 1023 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 DNM3Q9UQ16 869 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 H2AFYO75367 372 aaKnown RBP5.7□□□□□ -1.5
KRR1-201ENST00000229214 DEAF1O75398 565 aaPredicted RBP5.7□□□□□ -1.5
KRR1-201ENST00000229214 TMPOP42166 694 aaKnown RBP5.7□□□□□ -1.5
KRR1-201ENST00000229214 XPCQ01831 940 aaPredicted RBP5.7□□□□□ -1.5
KRR1-201ENST00000229214 PCBP1Q15365 356 aaKnown RBP eCLIP5.7□□□□□ -1.5
KRR1-201ENST00000229214 PNMA8CA0A1B0GUJ8 204 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 H3BQF6 201 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 PPIP5K2O43314 1243 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 CASP8Q14790 479 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 LDHAL6AQ6ZMR3 332 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 WDR60Q8WVS4 1066 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 PHF21AQ96BD5 680 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 TRIM56Q9BRZ2 755 aaKnown RBP5.7□□□□□ -1.5
KRR1-201ENST00000229214 ABCF2Q9UG63 623 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 SAR1BQ9Y6B6 198 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 ASAP2O43150 1006 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 ECDO95905 644 aaPredicted RBP5.7□□□□□ -1.5
KRR1-201ENST00000229214 PRKCQQ04759 706 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 LRRC63Q05C16 580 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 TTC23LQ6PF05 361 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 MMS22LQ6ZRQ5 1243 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 DDX42Q86XP3 938 aaKnown RBP eCLIP5.7□□□□□ -1.5
KRR1-201ENST00000229214 SCFD1Q8WVM8 642 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 HDLBPQ00341 1268 aaKnown RBP5.7□□□□□ -1.5
KRR1-201ENST00000229214 DMP1Q13316 513 aaPredicted RBP5.7□□□□□ -1.5
KRR1-201ENST00000229214 USP6NLQ92738 828 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 INPP5DQ92835 1189 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 CFAP36Q96G28 342 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 GCNAQ96QF7 691 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 TRPC7Q9HCX4 862 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 ANKFY1Q9P2R3 1169 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 SVILO95425 2214 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 TK2O00142 265 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 RGL2O15211 777 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 TAC1P20366 129 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 MAPK1P28482 360 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 PPP1R18Q6NYC8 613 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 CENPUQ71F23 418 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 NEK8Q86SG6 692 aa5.7□□□□□ -1.5
KRR1-201ENST00000229214 CCNJLQ8IV13 435 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms