RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Rtel1Q0VGM9 1203 aa16.45■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Nlrp14Q6B966 993 aa16.45■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Ccdc50Q810U5 305 aaKnown RBP16.45■□□□□ 0.22
Col2a1-201ENSMUST00000023123 H6pdQ8CFX1 789 aa16.45■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Slain2Q8CI08 581 aa16.45■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Zkscan3Q91VW9 553 aa16.45■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Cdc26Q99JP4 85 aa16.45■□□□□ 0.22
Col2a1-201ENSMUST00000023123 TbcbQ9D1E6 244 aa16.45■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Arl6ip4Q9JM93 229 aa16.45■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Uggt2E9Q4X2 1504 aa16.45■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Znf521Q6KAS7 1311 aa16.45■□□□□ 0.22
Col2a1-201ENSMUST00000023123 FancaQ9JL70 1439 aa16.45■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Arhgap6O54834 987 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Nek1P51954 1203 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 LbrQ3U9G9 626 aaKnown RBP16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Ttll4Q80UG8 1193 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Srgap2Q91Z67 1071 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 LnpkQ7TQ95 425 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Snip1Q8BIZ6 383 aaKnown RBP16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Ppp4r1Q8K2V1 951 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Tada3Q8R0L9 432 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 ArpinQ9D0A3 226 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Tspan17Q9D7W4 270 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 CoasyQ9DBL7 563 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Gtf2iQ9ESZ8 998 aaKnown RBP16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Gm21962L7N280 338 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Ccdc153P0C7Q1 202 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Slc9a2Q3ZAS0 814 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 PrimpolQ6P1E7 537 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Pcdhb12Q91Y07 789 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Ulk4Q3V129 1303 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Gm45194A0A140LJG2 572 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 ErmardE9Q048 622 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Lrch1P62046 709 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Ckap2lQ7TS74 745 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Trim56Q80VI1 734 aaKnown RBP16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Cttnbp2nlQ99LJ0 638 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Llcfc1Q9D9P8 108 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 ErmapQ9JLN5 566 aa16.44■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Fbxo3Q9DC63 480 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Stx1bP61264 288 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Syne3Q4FZC9 975 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Zrsr1Q64707 428 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Q80ZQ3 298 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Rasgrp4Q8BTM9 673 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Ddx19bQ8BZY3 494 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Plcg2Q8CIH5 1265 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Q8R1Y2 203 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Nde1Q9CZA6 344 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 C1qbpO35658 278 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Copb2O55029 905 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Rasgrf2P70392 1189 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Q8BWG4 1187 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Pus3Q9JI38 481 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Gfpt1P47856 697 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Prmt9Q3U3W5 846 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Ckap2Q3V1H1 664 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Miga1Q4QQM5 600 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Tmtc4Q8BG19 741 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Ehd2Q8BH64 543 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Add2Q9QYB8 725 aa16.43■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Gm3415J3QMS8 315 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Cacna2d1O08532 1103 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Syt2P46097 422 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Wfs1P56695 890 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Ppp2r2aQ6P1F6 447 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Gm3404Q9D506 307 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 PapolbQ9WVP6 641 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Ect2Q07139 913 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Elf1Q60775 612 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Pus7lQ8CE46 702 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Emilin1Q99K41 1017 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 A630010A05RikA9C473 232 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Gimap9G3X987 291 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 GfapP03995 430 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Cyp11b2P15539 500 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Dpcr1Q3TNW5 500 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Gngt2Q61017 69 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Sh3gl3Q62421 347 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Usp8Q80U87 1080 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Impg2Q80XH2 1243 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Atg16l1Q8C0J2 607 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Akap5D3YVF0 745 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 GsnP13020 780 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 PapolaQ61183 739 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Dhx40Q6PE54 779 aaKnown RBP16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Cacnb1Q8R3Z5 597 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 RpainQ9CWY9 219 aa16.42■□□□□ 0.22
Col2a1-201ENSMUST00000023123 VdrP48281 422 aa16.41■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Hspa8P63017 646 aaKnown RBP16.41■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Pla2g4eQ50L42 875 aa16.41■□□□□ 0.22
Col2a1-201ENSMUST00000023123 GypcQ78HU7 95 aa16.41■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Pdik1lQ8QZR7 341 aa16.41■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Mroh6V9GX81 722 aa16.41■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Pla2g4aP47713 748 aa16.41■□□□□ 0.22
Col2a1-201ENSMUST00000023123 MagohP61327 146 aaKnown RBP16.41■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Znf652Q5DU09 608 aa16.41■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Ube2oQ6ZPJ3 1288 aa16.41■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Dcaf5Q80T85 946 aa16.41■□□□□ 0.22
Col2a1-201ENSMUST00000023123 Adcy2Q80TL1 1090 aa16.41■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms