RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 RNF14Q9UBS8 474 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 K7ENM7 598 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 MYO1CO00159 1063 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 CYP19A1P11511 503 aaPredicted RBP18.22■□□□□ 0.51
SCARB2-210ENST00000638567 LRRC63Q05C16 580 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 HOMER3Q9NSC5 361 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 PGRMC1O00264 195 aaKnown RBP18.21■□□□□ 0.51
SCARB2-210ENST00000638567 GCFC2P16383 781 aaKnown RBP18.21■□□□□ 0.51
SCARB2-210ENST00000638567 CDK8P49336 464 aa18.21■□□□□ 0.51
SCARB2-210ENST00000638567 ATP11AP98196 1134 aa18.21■□□□□ 0.51
SCARB2-210ENST00000638567 MSANTD4Q8NCY6 345 aa18.21■□□□□ 0.51
SCARB2-210ENST00000638567 SRP68Q9UHB9 627 aaKnown RBP18.21■□□□□ 0.51
SCARB2-210ENST00000638567 MINPP1Q9UNW1 487 aa18.21■□□□□ 0.51
SCARB2-210ENST00000638567 HPS5Q9UPZ3 1129 aa18.21■□□□□ 0.51
SCARB2-210ENST00000638567 ZSCAN20P17040 1043 aaPredicted RBP18.21■□□□□ 0.51
SCARB2-210ENST00000638567 SPATS2Q86XZ4 545 aaKnown RBP18.21■□□□□ 0.51
SCARB2-210ENST00000638567 TMEM47Q9BQJ4 181 aa18.21■□□□□ 0.51
SCARB2-210ENST00000638567 STIM2Q9P246 746 aa18.21■□□□□ 0.51
SCARB2-210ENST00000638567 NFU1Q9UMS0 254 aa18.21■□□□□ 0.51
SCARB2-210ENST00000638567 STX2P32856 288 aa18.21■□□□□ 0.51
SCARB2-210ENST00000638567 ATP2C1P98194 919 aaPredicted RBP18.21■□□□□ 0.51
SCARB2-210ENST00000638567 ST3GAL1Q11201 340 aa18.21■□□□□ 0.51
SCARB2-210ENST00000638567 TXNRD1Q16881 649 aa18.21■□□□□ 0.51
SCARB2-210ENST00000638567 SPICE1Q8N0Z3 855 aa18.21■□□□□ 0.51
SCARB2-210ENST00000638567 TC2NQ8N9U0 490 aa18.21■□□□□ 0.51
SCARB2-210ENST00000638567 GPR101Q96P66 508 aaPredicted RBP18.21■□□□□ 0.51
SCARB2-210ENST00000638567 FEZ2Q9UHY8 353 aaPredicted RBP18.21■□□□□ 0.51
SCARB2-210ENST00000638567 A0A1B0GTH6 734 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 POTEMA6NI47 508 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 SERPING1P05155 500 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 STRN3Q13033 797 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 LLGL1Q15334 1064 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 MCTP2Q6DN12 878 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 CHURC1Q8WUH1 139 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 CEP170BQ9Y4F5 1589 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-210ENST00000638567 STAMBPO95630 424 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 TNNI1P19237 187 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 IFNAR2P48551 515 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 CLNS1AP54105 237 aaKnown RBP18.2■□□□□ 0.5
SCARB2-210ENST00000638567 IRX5P78411 483 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-210ENST00000638567 CELF1Q92879 486 aaKnown RBP18.2■□□□□ 0.5
SCARB2-210ENST00000638567 MAGOHBQ96A72 148 aaKnown RBP18.2■□□□□ 0.5
SCARB2-210ENST00000638567 ATP8A1Q9Y2Q0 1164 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 LRRN2O75325 713 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 FOSP01100 380 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-210ENST00000638567 IFNB1P01574 187 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 PLA2G4BP0C869 781 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 FERP16591 822 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 FXR1P51114 621 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCARB2-210ENST00000638567 MESDQ14696 234 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 FAM186BQ8IYM0 893 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 MLXIPQ9HAP2 919 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 SH3GLB2Q9NR46 395 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCARB2-210ENST00000638567 VSNL1P62760 191 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 RBM43Q6ZSC3 357 aaKnown RBP18.2■□□□□ 0.5
SCARB2-210ENST00000638567 EFCAB13Q8IY85 973 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 JDP2Q8WYK2 163 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 TSNARE1Q96NA8 513 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 CHP1Q99653 195 aa18.2■□□□□ 0.5
SCARB2-210ENST00000638567 ADAMTS13Q76LX8 1427 aa18.19■□□□□ 0.5
SCARB2-210ENST00000638567 GFPT2O94808 682 aa18.19■□□□□ 0.5
SCARB2-210ENST00000638567 TBC1D8O95759 1140 aa18.19■□□□□ 0.5
SCARB2-210ENST00000638567 HHATQ5VTY9 493 aa18.19■□□□□ 0.5
SCARB2-210ENST00000638567 EMBQ6PCB8 327 aa18.19■□□□□ 0.5
SCARB2-210ENST00000638567 SH3RF3Q8TEJ3 882 aaPredicted RBP18.19■□□□□ 0.5
SCARB2-210ENST00000638567 MPHOSPH6Q99547 160 aaKnown RBP18.19■□□□□ 0.5
SCARB2-210ENST00000638567 GRIN1Q05586 938 aa18.19■□□□□ 0.5
SCARB2-210ENST00000638567 CEP128Q6ZU80 1094 aa18.19■□□□□ 0.5
SCARB2-210ENST00000638567 CCDC17Q96LX7 622 aa18.19■□□□□ 0.5
SCARB2-210ENST00000638567 MAK16Q9BXY0 300 aaKnown RBP18.19■□□□□ 0.5
SCARB2-210ENST00000638567 A0A087WUV0 522 aaPredicted RBP18.19■□□□□ 0.5
SCARB2-210ENST00000638567 POLR2MP0CAP2 368 aa18.19■□□□□ 0.5
SCARB2-210ENST00000638567 UBXN2AP68543 259 aa18.19■□□□□ 0.5
SCARB2-210ENST00000638567 UNC13DQ70J99 1090 aa18.19■□□□□ 0.5
SCARB2-210ENST00000638567 DAAM1Q9Y4D1 1078 aa18.19■□□□□ 0.5
SCARB2-210ENST00000638567 ANO9A1A5B4 782 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 LRRC53A6NM62 1247 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 CD19P15391 556 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 MAP2K2P36507 400 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 PLTPP55058 493 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 PSMD2Q13200 908 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 ALKBH5Q6P6C2 394 aaKnown RBP18.18■□□□□ 0.5
SCARB2-210ENST00000638567 RAD9BQ6WBX8 426 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 PNPLA7Q6ZV29 1317 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 DHX9Q08211 1270 aaKnown RBP18.18■□□□□ 0.5
SCARB2-210ENST00000638567 IWS1Q96ST2 819 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 AP1M1Q9BXS5 423 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 ADD3Q9UEY8 706 aaKnown RBP18.18■□□□□ 0.5
SCARB2-210ENST00000638567 LMNB1P20700 586 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 ADCY8P40145 1251 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 TRPC3Q13507 836 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 FAM182BQ5T319 152 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 LRCH2Q5VUJ6 765 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 SRBD1Q8N5C6 995 aaKnown RBP18.18■□□□□ 0.5
SCARB2-210ENST00000638567 GCNT4Q9P109 453 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 TXNDC16Q9P2K2 825 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 GGCXP38435 758 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 FAM102BQ5T8I3 360 aa18.18■□□□□ 0.5
SCARB2-210ENST00000638567 FYB2Q5VWT5 728 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms