RNA–Protein interactions for RNA: ENST00000638249.1

KCNMA1-229, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-229ENST00000638249 TMTC3Q6ZXV5 915 aa17.11■□□□□ 0.33
KCNMA1-229ENST00000638249 FCHSD1Q86WN1 690 aa17.11■□□□□ 0.33
KCNMA1-229ENST00000638249 DEFB123Q8N688 67 aa17.11■□□□□ 0.33
KCNMA1-229ENST00000638249 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.11■□□□□ 0.33
KCNMA1-229ENST00000638249 MTG1Q9BT17 334 aaPredicted RBP17.11■□□□□ 0.33
KCNMA1-229ENST00000638249 WNT8AQ9H1J5 351 aa17.11■□□□□ 0.33
KCNMA1-229ENST00000638249 MAP3K20Q9NYL2 800 aaKnown RBP17.11■□□□□ 0.33
KCNMA1-229ENST00000638249 DDX41Q9UJV9 622 aaKnown RBP17.11■□□□□ 0.33
KCNMA1-229ENST00000638249 BRPF3Q9ULD4 1205 aa17.11■□□□□ 0.33
KCNMA1-229ENST00000638249 SCN5AQ14524 2016 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 RBAK-RBAKDNI3L0D1 243 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 EIF3JO75822 258 aaKnown RBP17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 GH1P01241 217 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 CPA1P15085 419 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 NBPF20Q3BBV1 942 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 RNF20Q5VTR2 975 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 APOA5Q6Q788 366 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 USP17L6PQ6QN14 398 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 VSIG10LQ86VR7 867 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 TMTC2Q8N394 836 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 VWCEQ96DN2 955 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 RRP36Q96EU6 259 aaKnown RBP17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 NOC4LQ9BVI4 516 aaKnown RBP17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 HIPK3Q9H422 1215 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 SLC12A7Q9Y666 1083 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 CHD9Q3L8U1 2897 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 CNTNAP5Q8WYK1 1306 aa17.1■□□□□ 0.33
KCNMA1-229ENST00000638249 SORBS3O60504 671 aa17.09■□□□□ 0.33
KCNMA1-229ENST00000638249 SMARCA1P28370 1054 aa17.09■□□□□ 0.33
KCNMA1-229ENST00000638249 SP2Q02086 613 aa17.09■□□□□ 0.33
KCNMA1-229ENST00000638249 CCDC82Q8N4S0 544 aa17.09■□□□□ 0.33
KCNMA1-229ENST00000638249 SAMD3Q8N6K7 520 aa17.09■□□□□ 0.33
KCNMA1-229ENST00000638249 KAT2BQ92831 832 aa17.09■□□□□ 0.33
KCNMA1-229ENST00000638249 KCNB2Q92953 911 aa17.09■□□□□ 0.33
KCNMA1-229ENST00000638249 RNPC3Q96LT9 517 aaKnown RBP17.09■□□□□ 0.33
KCNMA1-229ENST00000638249 BCAS3Q9H6U6 928 aa17.09■□□□□ 0.33
KCNMA1-229ENST00000638249 MRVI1Q9Y6F6 885 aa17.09■□□□□ 0.33
KCNMA1-229ENST00000638249 MEIS2O14770 477 aa17.08■□□□□ 0.32
KCNMA1-229ENST00000638249 ACRP10323 421 aa17.08■□□□□ 0.32
KCNMA1-229ENST00000638249 CYP2C9P11712 490 aa17.08■□□□□ 0.32
KCNMA1-229ENST00000638249 UBA1P22314 1058 aaKnown RBP17.08■□□□□ 0.32
KCNMA1-229ENST00000638249 MRPS9P82933 396 aaKnown RBP17.08■□□□□ 0.32
KCNMA1-229ENST00000638249 FUT2Q10981 343 aa17.08■□□□□ 0.32
KCNMA1-229ENST00000638249 TMEM240Q5SV17 173 aa17.08■□□□□ 0.32
KCNMA1-229ENST00000638249 FAM109BQ6ICB4 259 aaPredicted RBP17.08■□□□□ 0.32
KCNMA1-229ENST00000638249 DHX32Q7L7V1 743 aaKnown RBP17.08■□□□□ 0.32
KCNMA1-229ENST00000638249 FANCBQ8NB91 859 aa17.08■□□□□ 0.32
KCNMA1-229ENST00000638249 EMID1Q96A84 441 aaPredicted RBP17.08■□□□□ 0.32
KCNMA1-229ENST00000638249 LZTS2Q9BRK4 669 aa17.08■□□□□ 0.32
KCNMA1-229ENST00000638249 MTMR10Q9NXD2 777 aa17.08■□□□□ 0.32
KCNMA1-229ENST00000638249 CALM1P0DP23 149 aa17.07■□□□□ 0.32
KCNMA1-229ENST00000638249 CALM2P0DP24 149 aa17.07■□□□□ 0.32
KCNMA1-229ENST00000638249 CALM3P0DP25 149 aa17.07■□□□□ 0.32
KCNMA1-229ENST00000638249 CCND2P30279 289 aa17.07■□□□□ 0.32
KCNMA1-229ENST00000638249 GNAQP50148 359 aa17.07■□□□□ 0.32
KCNMA1-229ENST00000638249 CCL23P55773 120 aa17.07■□□□□ 0.32
KCNMA1-229ENST00000638249 TRAF1Q13077 416 aa17.07■□□□□ 0.32
KCNMA1-229ENST00000638249 SEMA3FQ13275 785 aa17.07■□□□□ 0.32
KCNMA1-229ENST00000638249 FAM47CQ5HY64 1035 aa17.07■□□□□ 0.32
KCNMA1-229ENST00000638249 CTAGE1Q96RT6 745 aa17.07■□□□□ 0.32
KCNMA1-229ENST00000638249 SEC63Q9UGP8 760 aaKnown RBP17.07■□□□□ 0.32
KCNMA1-229ENST00000638249 SNX14Q9Y5W7 946 aa17.07■□□□□ 0.32
KCNMA1-229ENST00000638249 GBF1Q92538 1859 aa17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 ZNF286BP0CG31 522 aa17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 HSPA4P34932 840 aa17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 PPIGQ13427 754 aaKnown RBP eCLIP17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 UBE2SQ16763 222 aa17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 HSDL1Q3SXM5 330 aa17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 BRDTQ58F21 947 aaPredicted RBP17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 RASIP1Q5U651 963 aa17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 TYW1BQ6NUM6 668 aa17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 SCLYQ96I15 445 aa17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 FAM161BQ96MY7 647 aa17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 GUCD1Q96NT3 240 aa17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 SEZ6LQ9BYH1 1024 aa17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 FAM217BQ9NTX9 383 aaPredicted RBP17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 UNC80Q8N2C7 3258 aa17.06■□□□□ 0.32
KCNMA1-229ENST00000638249 PIK3CDO00329 1044 aa17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 GGPS1O95749 300 aa17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 HOXD8P13378 290 aaPredicted RBP17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 CDC27P30260 824 aa17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 CHMP4BP1P59074 171 aa17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 MYSM1Q5VVJ2 828 aa17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 WWC2Q6AWC2 1192 aa17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 NFRKBQ6P4R8 1299 aa17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 ZNF365Q70YC5 407 aa17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 TMEM199Q8N511 208 aa17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 PPTC7Q8NI37 304 aa17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 INPP4AQ96PE3 977 aaPredicted RBP17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 TTYH1Q9H313 450 aaPredicted RBP17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 TELO2Q9Y4R8 837 aa17.05■□□□□ 0.32
KCNMA1-229ENST00000638249 CHD7Q9P2D1 2997 aa17.04■□□□□ 0.32
KCNMA1-229ENST00000638249 KLF18A0A0U1RQI7 1052 aa17.04■□□□□ 0.32
KCNMA1-229ENST00000638249 KPNA6O60684 536 aa17.04■□□□□ 0.32
KCNMA1-229ENST00000638249 F2P00734 622 aa17.04■□□□□ 0.32
KCNMA1-229ENST00000638249 NEFLP07196 543 aa17.04■□□□□ 0.32
KCNMA1-229ENST00000638249 SMAD3P84022 425 aaKnown RBP17.04■□□□□ 0.32
KCNMA1-229ENST00000638249 KRT32Q14532 448 aa17.04■□□□□ 0.32
KCNMA1-229ENST00000638249 CELF3Q5SZQ8 465 aaKnown RBP17.04■□□□□ 0.32
KCNMA1-229ENST00000638249 DHX37Q8IY37 1157 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms