RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 NUCB1Q02818 461 aa22.13■■□□□ 1.13
SMN2-215ENST00000628696 SKIV2LQ15477 1246 aaKnown RBP22.13■■□□□ 1.13
SMN2-215ENST00000628696 CCDC155Q8N6L0 562 aa22.13■■□□□ 1.13
SMN2-215ENST00000628696 PHOSPHO2Q8TCD6 241 aa22.13■■□□□ 1.13
SMN2-215ENST00000628696 IWS1Q96ST2 819 aa22.13■■□□□ 1.13
SMN2-215ENST00000628696 MAF1Q9H063 256 aa22.13■■□□□ 1.13
SMN2-215ENST00000628696 JMJD4Q9H9V9 463 aa22.13■■□□□ 1.13
SMN2-215ENST00000628696 CTNNA3Q9UI47 895 aa22.13■■□□□ 1.13
SMN2-215ENST00000628696 CHD7Q9P2D1 2997 aa22.12■■□□□ 1.13
SMN2-215ENST00000628696 KIF28PB7ZC32 967 aa22.12■■□□□ 1.13
SMN2-215ENST00000628696 CFBP00751 764 aa22.12■■□□□ 1.13
SMN2-215ENST00000628696 GDF6Q6KF10 455 aaPredicted RBP22.12■■□□□ 1.13
SMN2-215ENST00000628696 UBAC1Q9BSL1 405 aa22.12■■□□□ 1.13
SMN2-215ENST00000628696 DSCC1Q9BVC3 393 aa22.12■■□□□ 1.13
SMN2-215ENST00000628696 KRT23Q9C075 422 aa22.12■■□□□ 1.13
SMN2-215ENST00000628696 GTPBP6O43824 516 aaPredicted RBP22.11■■□□□ 1.13
SMN2-215ENST00000628696 HERC6Q8IVU3 1022 aa22.11■■□□□ 1.13
SMN2-215ENST00000628696 CAGE1Q8TC20 777 aa22.11■■□□□ 1.13
SMN2-215ENST00000628696 ARNTL2Q8WYA1 636 aa22.11■■□□□ 1.13
SMN2-215ENST00000628696 KAT2BQ92831 832 aa22.11■■□□□ 1.13
SMN2-215ENST00000628696 UHRF1Q96T88 793 aaPredicted RBP22.11■■□□□ 1.13
SMN2-215ENST00000628696 ALG1Q9BT22 464 aa22.11■■□□□ 1.13
SMN2-215ENST00000628696 DDX41Q9UJV9 622 aaKnown RBP22.11■■□□□ 1.13
SMN2-215ENST00000628696 NR3C2P08235 984 aa22.1■■□□□ 1.13
SMN2-215ENST00000628696 KCNJ6P48051 423 aa22.1■■□□□ 1.13
SMN2-215ENST00000628696 DGKDQ16760 1214 aa22.1■■□□□ 1.13
SMN2-215ENST00000628696 IFIT1BQ5T764 474 aaKnown RBP22.1■■□□□ 1.13
SMN2-215ENST00000628696 STAG2Q8N3U4 1231 aa22.1■■□□□ 1.13
SMN2-215ENST00000628696 AFAP1L1Q8TED9 768 aa22.1■■□□□ 1.13
SMN2-215ENST00000628696 MRVI1Q9Y6F6 885 aa22.1■■□□□ 1.13
SMN2-215ENST00000628696 NCOR1O75376 2440 aa22.09■■□□□ 1.13
SMN2-215ENST00000628696 EIF3JO75822 258 aaKnown RBP22.09■■□□□ 1.13
SMN2-215ENST00000628696 TAP1Q03518 808 aa22.09■■□□□ 1.13
SMN2-215ENST00000628696 SESTD1Q86VW0 696 aa22.09■■□□□ 1.13
SMN2-215ENST00000628696 C7orf31Q8N865 590 aa22.09■■□□□ 1.13
SMN2-215ENST00000628696 YTHDC1Q96MU7 727 aaKnown RBP22.09■■□□□ 1.13
SMN2-215ENST00000628696 AMNQ9BXJ7 453 aa22.09■■□□□ 1.13
SMN2-215ENST00000628696 CNNM2Q9H8M5 875 aa22.09■■□□□ 1.13
SMN2-215ENST00000628696 PXMP2Q9NR77 195 aa22.09■■□□□ 1.13
SMN2-215ENST00000628696 HDAC6Q9UBN7 1215 aa22.09■■□□□ 1.13
SMN2-215ENST00000628696 MTCH2Q9Y6C9 303 aa22.09■■□□□ 1.13
SMN2-215ENST00000628696 EPOPA6NHQ4 379 aa22.08■■□□□ 1.13
SMN2-215ENST00000628696 TLL1O43897 1013 aa22.08■■□□□ 1.13
SMN2-215ENST00000628696 BAIAP3O94812 1187 aa22.08■■□□□ 1.13
SMN2-215ENST00000628696 ARHGEF15O94989 841 aa22.08■■□□□ 1.13
SMN2-215ENST00000628696 MYCLP12524 364 aaPredicted RBP22.08■■□□□ 1.13
SMN2-215ENST00000628696 SELPP16109 830 aa22.08■■□□□ 1.13
SMN2-215ENST00000628696 PSEN2P49810 448 aa22.08■■□□□ 1.13
SMN2-215ENST00000628696 TFF2Q03403 129 aa22.08■■□□□ 1.13
SMN2-215ENST00000628696 LAMC2Q13753 1193 aa22.08■■□□□ 1.13
SMN2-215ENST00000628696 LRRC8DQ7L1W4 858 aa22.08■■□□□ 1.13
SMN2-215ENST00000628696 DHX37Q8IY37 1157 aaKnown RBP22.08■■□□□ 1.13
SMN2-215ENST00000628696 CTAGE1Q96RT6 745 aa22.08■■□□□ 1.13
SMN2-215ENST00000628696 BAZ2BQ9UIF8 2168 aaKnown RBP22.07■■□□□ 1.12
SMN2-215ENST00000628696 KLRF2D3W0D1 207 aa22.07■■□□□ 1.12
SMN2-215ENST00000628696 SORBS3O60504 671 aa22.07■■□□□ 1.12
SMN2-215ENST00000628696 ZNF286BP0CG31 522 aa22.07■■□□□ 1.12
SMN2-215ENST00000628696 KRT40Q6A162 431 aa22.07■■□□□ 1.12
SMN2-215ENST00000628696 EXOC6Q8TAG9 804 aa22.07■■□□□ 1.12
SMN2-215ENST00000628696 DHX38Q92620 1227 aaKnown RBP22.07■■□□□ 1.12
SMN2-215ENST00000628696 ZBED2Q9BTP6 218 aa22.07■■□□□ 1.12
SMN2-215ENST00000628696 GTF2IRD1Q9UHL9 959 aa22.07■■□□□ 1.12
SMN2-215ENST00000628696 PTPRSQ13332 1948 aa22.07■■□□□ 1.12
SMN2-215ENST00000628696 MFSD10Q14728 455 aa22.06■■□□□ 1.12
SMN2-215ENST00000628696 KIAA0753Q2KHM9 967 aa22.06■■□□□ 1.12
SMN2-215ENST00000628696 AAK1Q2M2I8 961 aa22.06■■□□□ 1.12
SMN2-215ENST00000628696 TMCO2Q7Z6W1 182 aaPredicted RBP22.06■■□□□ 1.12
SMN2-215ENST00000628696 NECAB3Q96P71 396 aaPredicted RBP22.06■■□□□ 1.12
SMN2-215ENST00000628696 KATNAL1Q9BW62 490 aa22.06■■□□□ 1.12
SMN2-215ENST00000628696 PCDHA1Q9Y5I3 950 aa22.06■■□□□ 1.12
SMN2-215ENST00000628696 OPLAHO14841 1288 aa22.05■■□□□ 1.12
SMN2-215ENST00000628696 CKBP12277 381 aa22.05■■□□□ 1.12
SMN2-215ENST00000628696 POU3F3P20264 500 aaPredicted RBP22.05■■□□□ 1.12
SMN2-215ENST00000628696 HOXA13P31271 388 aaPredicted RBP22.05■■□□□ 1.12
SMN2-215ENST00000628696 HSD17B4P51659 736 aa22.05■■□□□ 1.12
SMN2-215ENST00000628696 WDR5P61964 334 aaKnown RBP22.05■■□□□ 1.12
SMN2-215ENST00000628696 GPNMBQ14956 572 aa22.05■■□□□ 1.12
SMN2-215ENST00000628696 CYB5R4Q7L1T6 521 aa22.05■■□□□ 1.12
SMN2-215ENST00000628696 PPTC7Q8NI37 304 aa22.05■■□□□ 1.12
SMN2-215ENST00000628696 EMID1Q96A84 441 aaPredicted RBP22.05■■□□□ 1.12
SMN2-215ENST00000628696 ZBTB5O15062 677 aa22.04■■□□□ 1.12
SMN2-215ENST00000628696 PPP1R11O60927 126 aaPredicted RBP22.04■■□□□ 1.12
SMN2-215ENST00000628696 BMP1P13497 986 aa22.04■■□□□ 1.12
SMN2-215ENST00000628696 COL9A1P20849 921 aa22.04■■□□□ 1.12
SMN2-215ENST00000628696 SEC23AQ15436 765 aa22.04■■□□□ 1.12
SMN2-215ENST00000628696 CNKSR3Q6P9H4 555 aa22.04■■□□□ 1.12
SMN2-215ENST00000628696 HOMER1Q86YM7 354 aa22.04■■□□□ 1.12
SMN2-215ENST00000628696 PDCD2LQ9BRP1 358 aa22.04■■□□□ 1.12
SMN2-215ENST00000628696 IL25Q9H293 177 aa22.04■■□□□ 1.12
SMN2-215ENST00000628696 MAD2L2Q9UI95 211 aa22.04■■□□□ 1.12
SMN2-215ENST00000628696 NBNO60934 754 aa22.03■■□□□ 1.12
SMN2-215ENST00000628696 PARNO95453 639 aaKnown RBP22.03■■□□□ 1.12
SMN2-215ENST00000628696 KCNQ1P51787 676 aa22.03■■□□□ 1.12
SMN2-215ENST00000628696 DEFB103AP81534 67 aa22.03■■□□□ 1.12
SMN2-215ENST00000628696 ZNF200P98182 395 aaPredicted RBP22.03■■□□□ 1.12
SMN2-215ENST00000628696 TRDNQ13061 729 aa22.03■■□□□ 1.12
SMN2-215ENST00000628696 SPRED2Q7Z698 418 aa22.03■■□□□ 1.12
SMN2-215ENST00000628696 ZFP91Q96JP5 570 aaPredicted RBP22.03■■□□□ 1.12
SMN2-215ENST00000628696 SPATA33Q96N06 139 aa22.03■■□□□ 1.12
SMN2-215ENST00000628696 LCHNA4D1U4 455 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms