RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 RINT1Q6NUQ1 792 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 CCDC121Q6ZUS5 278 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 SLC39A2Q9NP94 309 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 RIC8AQ9NPQ8 531 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 ADCY9O60503 1353 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 HEXIM1O94992 359 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 SRGAP2CP0DJJ0 459 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 CDK8P49336 464 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 TRMT44Q8IYL2 757 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 RNF26Q9BY78 433 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 VPS37BQ9H9H4 285 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 MAGEF1Q9HAY2 307 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 HACL1Q9UJ83 578 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 UBN2Q6ZU65 1347 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 OSTNP61366 133 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 SIX6OS1Q8N1H7 587 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 TCP11Q8WWU5 503 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 FAM167AQ96KS9 214 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 BRIP1Q9BX63 1249 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 INPP5FQ9Y2H2 1132 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 FAM170AA1A519 330 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 ZNF157P51786 506 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 PKP1Q13835 747 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 TAF1CQ15572 869 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 SNRNP48Q6IEG0 339 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 USP17L2Q6R6M4 530 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 CROCCP2Q86T23 111 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 PALM2Q8IXS6 379 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 TTLL11Q8NHH1 800 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 IFIH1Q9BYX4 1025 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 TMEM206Q9H813 350 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 ABCA6Q8N139 1617 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 SSH2Q76I76 1423 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 GTPBP6O43824 516 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 KRT15P19012 456 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 TRAPPC10P48553 1259 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 DMTNQ08495 405 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 SPP2Q13103 211 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 SURF1Q15526 300 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 INTS8Q75QN2 995 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 AFAP1L1Q8TED9 768 aa10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 INO80Q9ULG1 1556 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-211ENST00000621271 ARHGAP6O43182 974 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 TBC1D8O95759 1140 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 FCER1AP12319 257 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 COPB2P35606 906 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 MYL7Q01449 175 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 PTH1RQ03431 593 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 PNOCQ13519 176 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 TTLL4Q14679 1199 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 ME3Q16798 604 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 SDCCAG8Q86SQ7 713 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 KLHL7Q8IXQ5 586 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 URGCPQ8TCY9 931 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 LARP4BQ92615 738 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 EPSTI1Q96J88 318 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 RPF1Q9H9Y2 349 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 I3L4J1 428 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 PRKAB2O43741 272 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 RPS6KA2Q15349 733 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 DNAJC21Q5F1R6 531 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 HHATQ5VTY9 493 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 IFT20Q8IY31 132 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 THEM5Q8N1Q8 247 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 TBCKQ8TEA7 893 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 TTC1Q99614 292 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 CD209Q9NNX6 404 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 NXF1Q9UBU9 619 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 TBC1D9BQ66K14 1250 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 PGBD1Q96JS3 809 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 SLC38A10Q9HBR0 1119 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 FEM1BQ9UK73 627 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 KCNJ18B7U540 433 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 WDR46O15213 610 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 LMNB1P20700 586 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 NT5C2P49902 561 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 KCNJ12Q14500 433 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 LONRF2Q1L5Z9 754 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 RNF219Q5W0B1 726 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 TWF2Q6IBS0 349 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 AK8Q96MA6 479 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 MMP19Q99542 508 aa10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 TOPORSQ9NS56 1045 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-211ENST00000621271 CYP27B1O15528 508 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 SRGAP2BP0DMP2 458 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 GPSM2P81274 684 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 RASGRF1Q13972 1273 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 CFAP221Q4G0U5 840 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 PPP4R1Q8TF05 950 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 DCAF4Q8WV16 495 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 FAM81BQ96LP2 452 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 CUEDC2Q9H467 287 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 CEP170BQ9Y4F5 1589 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 PRR36Q9H6K5 1346 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 PNMA6FA0A0J9YX94 578 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 THAP12O43422 761 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 BNIP3LO60238 219 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 ATXN8OSP0DMR3 200 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 PFKFB1P16118 471 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms