RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 BTNL9Q6UXG8 535 aa11.12□□□□□ -0.63
VTA1-205ENST00000620996 SLC30A10Q6XR72 485 aa11.12□□□□□ -0.63
VTA1-205ENST00000620996 FAM160B2Q86V87 743 aa11.12□□□□□ -0.63
VTA1-205ENST00000620996 CYP2W1Q8TAV3 490 aa11.12□□□□□ -0.63
VTA1-205ENST00000620996 ZNF592Q92610 1267 aa11.12□□□□□ -0.63
VTA1-205ENST00000620996 PNMA5Q96PV4 448 aa11.12□□□□□ -0.63
VTA1-205ENST00000620996 TRIM9Q9C026 710 aa11.12□□□□□ -0.63
VTA1-205ENST00000620996 VPS16Q9H269 839 aa11.12□□□□□ -0.63
VTA1-205ENST00000620996 CUEDC2Q9H467 287 aa11.12□□□□□ -0.63
VTA1-205ENST00000620996 PICK1Q9NRD5 415 aa11.12□□□□□ -0.63
VTA1-205ENST00000620996 TAB2Q9NYJ8 693 aa11.12□□□□□ -0.63
VTA1-205ENST00000620996 FEM1BQ9UK73 627 aa11.12□□□□□ -0.63
VTA1-205ENST00000620996 POTEB3A0JP26 581 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 POTECB2RU33 542 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 MEIS1O00470 390 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 PSMA7O14818 248 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 FOSP01100 380 aaPredicted RBP11.11□□□□□ -0.63
VTA1-205ENST00000620996 FCER1AP12319 257 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 CACNB1Q02641 598 aaPredicted RBP11.11□□□□□ -0.63
VTA1-205ENST00000620996 POTEBQ6S5H4 581 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 LDHDQ86WU2 507 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 CCDC150Q8NCX0 1101 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 TEPSINQ96N21 525 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 SPON1Q9HCB6 807 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 IMPACTQ9P2X3 320 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 MRPL11Q9Y3B7 192 aaKnown RBP11.11□□□□□ -0.63
VTA1-205ENST00000620996 EPS15P42566 896 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 USP11P51784 963 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 CYP4A11Q02928 519 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 DCAF15Q66K64 600 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 ARMCX5Q6P1M9 558 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 KCNK18Q7Z418 384 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 FHDC1Q9C0D6 1143 aaPredicted RBP11.11□□□□□ -0.63
VTA1-205ENST00000620996 PSME4Q14997 1843 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 PHF20L1A8MW92 1017 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 E9PMD0 336 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 FAM86B1E9PN63 330 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 N4BP3O15049 544 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 FAM86B2P0C5J1 330 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 TRAF1Q13077 416 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 VSTM4Q8IW00 320 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 MAGEF1Q9HAY2 307 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 RAVER2Q9HCJ3 691 aaKnown RBP11.11□□□□□ -0.63
VTA1-205ENST00000620996 TBC1D7Q9P0N9 293 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 MAGEC2Q9UBF1 373 aaPredicted RBP11.11□□□□□ -0.63
VTA1-205ENST00000620996 RWDD2AQ9UIY3 292 aa11.11□□□□□ -0.63
VTA1-205ENST00000620996 MYMKA6NI61 221 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 OPLAHO14841 1288 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 TEX33O43247 280 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 PDIA5Q14554 519 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 ECM1Q16610 540 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 RAD54LQ92698 747 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 SLF1Q9BQI6 1058 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 KIF13BQ9NQT8 1826 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 POTEFA5A3E0 1075 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 POTEIP0CG38 1075 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 ZNF18P17022 549 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 ADKP55263 362 aaKnown RBP11.1□□□□□ -0.63
VTA1-205ENST00000620996 STK4Q13043 487 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 POTEGQ6S5H5 508 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 POTEEQ6S8J3 1075 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 TEX2Q8IWB9 1127 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 SLFN12Q8IYM2 578 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
VTA1-205ENST00000620996 BLOC1S4Q9NUP1 217 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 INTS13Q9NVM9 706 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 STK17AQ9UEE5 414 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 KCNJ18B7U540 433 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 DDX39AO00148 427 aaKnown RBP11.1□□□□□ -0.63
VTA1-205ENST00000620996 KLRC4O43908 158 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 CTNND1O60716 968 aaKnown RBP11.1□□□□□ -0.63
VTA1-205ENST00000620996 KCNJ12Q14500 433 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 DLK2Q6UY11 383 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 ERMNQ8TAM6 284 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 SRRTQ9BXP5 876 aaKnown RBP11.1□□□□□ -0.63
VTA1-205ENST00000620996 RANBP17Q9H2T7 1088 aaKnown RBP11.1□□□□□ -0.63
VTA1-205ENST00000620996 RPAP3Q9H6T3 665 aaPredicted RBP11.1□□□□□ -0.63
VTA1-205ENST00000620996 RNF181Q9P0P0 153 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 PGAP2Q9UHJ9 254 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 SYNPO2Q9UMS6 1093 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 ZHX2Q9Y6X8 837 aa11.1□□□□□ -0.63
VTA1-205ENST00000620996 ABCB11O95342 1321 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 DDNO94850 711 aaPredicted RBP11.09□□□□□ -0.63
VTA1-205ENST00000620996 KIF20AO95235 890 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 MYL1P05976 194 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 LMNB1P20700 586 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 SREBF1P36956 1147 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 CCZ1BP86790 482 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 CCZ1P86791 482 aaPredicted RBP11.09□□□□□ -0.63
VTA1-205ENST00000620996 LRRC41Q15345 812 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 CNNM4Q6P4Q7 775 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 PPFIBP1Q86W92 1011 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 ADSSL1Q8N142 457 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 DDX12PQ92771 950 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 EHMT1Q9H9B1 1298 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 FER1L6Q2WGJ9 1857 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 LTBP3Q9NS15 1303 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 NPHP3-ACAD11A0A0J9YXS1 232 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 RHOBTB3O94955 611 aa11.09□□□□□ -0.63
VTA1-205ENST00000620996 ERCC3P19447 782 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms