RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 PPTC7Q8NI37 304 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 DHX38Q92620 1227 aaKnown RBP6.58□□□□□ -1.36
FMR1-217ENST00000620828 HTATIP2Q9BUP3 242 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 ANO2Q9NQ90 1003 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 FNDC1Q4ZHG4 1894 aaPredicted RBP6.58□□□□□ -1.36
FMR1-217ENST00000620828 PGK1P00558 417 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 IFNAR1P17181 557 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 MYSM1Q5VVJ2 828 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 CRIPAKQ8N1N5 446 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 ARVCFO00192 962 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 LGR5O75473 907 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 ECM2O94769 699 aaPredicted RBP6.58□□□□□ -1.36
FMR1-217ENST00000620828 F2P00734 622 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 ASGR1P07306 291 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 RARBP10826 455 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 ITGB5P18084 799 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 CIITAP33076 1130 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 TNFAIP2Q03169 654 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 TRIM60Q495X7 471 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 Q6ZUG5 572 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 NIPA1Q7RTP0 329 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 CATIPQ7Z7H3 387 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 TLK2Q86UE8 772 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 CEP89Q96ST8 783 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 WNT8AQ9H1J5 351 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 SH3GLB2Q9NR46 395 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 ADD3Q9UEY8 706 aaKnown RBP6.58□□□□□ -1.36
FMR1-217ENST00000620828 COL6A3P12111 3177 aa6.58□□□□□ -1.36
FMR1-217ENST00000620828 FDPSP14324 419 aaKnown RBP6.57□□□□□ -1.36
FMR1-217ENST00000620828 TCTN1Q2MV58 587 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 CELF3Q5SZQ8 465 aaKnown RBP6.57□□□□□ -1.36
FMR1-217ENST00000620828 RPAINQ86UA6 219 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 NSUN6Q8TEA1 469 aaKnown RBP6.57□□□□□ -1.36
FMR1-217ENST00000620828 PCYT2Q99447 389 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 DAXXQ9UER7 740 aaPredicted RBP6.57□□□□□ -1.36
FMR1-217ENST00000620828 PCDHA1Q9Y5I3 950 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 NFASCO94856 1347 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 CYP3A7-CYP3A51PA0A087WV96 503 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 CABYRO75952 493 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 TGFB3P10600 412 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 CYP3A7P24462 503 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 SREBF1P36956 1147 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 NFRKBQ6P4R8 1299 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 SENP7Q9BQF6 1050 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 HOMER2Q9NSB8 354 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 PFKFB2O60825 505 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 NR3C2P08235 984 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 CDK11BP21127 795 aaKnown RBP6.57□□□□□ -1.36
FMR1-217ENST00000620828 MAGEA10P43363 369 aaPredicted RBP6.57□□□□□ -1.36
FMR1-217ENST00000620828 FAM109BQ6ICB4 259 aaPredicted RBP6.57□□□□□ -1.36
FMR1-217ENST00000620828 COPS5Q92905 334 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 LRRC2Q9BYS8 371 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 WDR11Q9BZH6 1224 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 STBD1O95210 358 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 GNAQP50148 359 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 FSCN1Q16658 493 aaKnown RBP6.57□□□□□ -1.36
FMR1-217ENST00000620828 LINC01465Q8N7H1 131 aa6.57□□□□□ -1.36
FMR1-217ENST00000620828 MYH9P35579 1960 aaKnown RBP6.56□□□□□ -1.36
FMR1-217ENST00000620828 CXCL10P02778 98 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 UBA1P22314 1058 aaKnown RBP6.56□□□□□ -1.36
FMR1-217ENST00000620828 FAM26DQ5JW98 314 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 RNF20Q5VTR2 975 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 CMTR1Q8N1G2 835 aaKnown RBP6.56□□□□□ -1.36
FMR1-217ENST00000620828 RNF26Q9BY78 433 aaPredicted RBP6.56□□□□□ -1.36
FMR1-217ENST00000620828 TPCN1Q9ULQ1 816 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 XIRP2A4UGR9 3374 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 PDCD11Q14690 1871 aaKnown RBP6.56□□□□□ -1.36
FMR1-217ENST00000620828 ZBTB42B2RXF5 422 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 B4GALT4O60513 344 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 REC8O95072 547 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 LARGE1O95461 756 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 TIMP1P01033 207 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 APOBRQ0VD83 1088 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 TRDNQ13061 729 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 USH1GQ495M9 461 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 RNF180Q86T96 592 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 SCFD2Q8WU76 684 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 DDX11Q96FC9 970 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 GPR20Q99678 358 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 NOC4LQ9BVI4 516 aaKnown RBP6.56□□□□□ -1.36
FMR1-217ENST00000620828 KIF5BP33176 963 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 MARCH8Q5T0T0 291 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 RALYLQ86SE5 291 aaKnown RBP6.56□□□□□ -1.36
FMR1-217ENST00000620828 PCSK9Q8NBP7 692 aaKnown RBP6.56□□□□□ -1.36
FMR1-217ENST00000620828 SMARCC2Q8TAQ2 1214 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 WNT8BQ93098 351 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 ANP32EQ9BTT0 268 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 CNPY2Q9Y2B0 182 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 TET1Q8NFU7 2136 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 MEIS1O00470 390 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 KPNA6O60684 536 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 ADD1P35611 737 aaKnown RBP6.56□□□□□ -1.36
FMR1-217ENST00000620828 MGAT3Q09327 533 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 SCRN1Q12765 414 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 SART3Q15020 963 aaKnown RBP6.56□□□□□ -1.36
FMR1-217ENST00000620828 LY6KQ17RY6 165 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 GPRASP2Q96D09 838 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 TCEANC2Q96MN5 208 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 RMDN3Q96TC7 470 aa6.56□□□□□ -1.36
FMR1-217ENST00000620828 PHF20Q9BVI0 1012 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms