RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 B4GALT4O60513 344 aa21.03■□□□□ 0.96
VCX3A-203ENST00000612369 HMGB1P09429 215 aaKnown RBP21.03■□□□□ 0.96
VCX3A-203ENST00000612369 MYCLP12524 364 aaPredicted RBP21.03■□□□□ 0.96
VCX3A-203ENST00000612369 CCND2P30279 289 aa21.03■□□□□ 0.96
VCX3A-203ENST00000612369 SMAD3P84022 425 aaKnown RBP21.03■□□□□ 0.96
VCX3A-203ENST00000612369 EXOSC10Q01780 885 aaKnown RBP21.03■□□□□ 0.96
VCX3A-203ENST00000612369 LAMC2Q13753 1193 aa21.03■□□□□ 0.96
VCX3A-203ENST00000612369 FCHSD1Q86WN1 690 aa21.03■□□□□ 0.96
VCX3A-203ENST00000612369 PIBF1Q8WXW3 757 aa21.03■□□□□ 0.96
VCX3A-203ENST00000612369 RNPC3Q96LT9 517 aaKnown RBP21.03■□□□□ 0.96
VCX3A-203ENST00000612369 LRRC2Q9BYS8 371 aa21.03■□□□□ 0.96
VCX3A-203ENST00000612369 PPP1R12CQ9BZL4 782 aa21.03■□□□□ 0.96
VCX3A-203ENST00000612369 TRPV6Q9H1D0 765 aa21.03■□□□□ 0.96
VCX3A-203ENST00000612369 HIPK3Q9H422 1215 aa21.03■□□□□ 0.96
VCX3A-203ENST00000612369 STAM2O75886 525 aa21.02■□□□□ 0.96
VCX3A-203ENST00000612369 PLEKHA8P1O95397 391 aa21.02■□□□□ 0.96
VCX3A-203ENST00000612369 MMP3P08254 477 aa21.02■□□□□ 0.96
VCX3A-203ENST00000612369 TGFB3P10600 412 aa21.02■□□□□ 0.96
VCX3A-203ENST00000612369 CASTP20810 708 aaKnown RBP21.02■□□□□ 0.96
VCX3A-203ENST00000612369 NBPF20Q3BBV1 942 aa21.02■□□□□ 0.96
VCX3A-203ENST00000612369 RASEFQ8IZ41 740 aa21.02■□□□□ 0.96
VCX3A-203ENST00000612369 AFG1LQ8WV93 481 aa21.02■□□□□ 0.96
VCX3A-203ENST00000612369 CUL5Q93034 780 aa21.02■□□□□ 0.96
VCX3A-203ENST00000612369 LAMA2P24043 3122 aaKnown RBP21.02■□□□□ 0.95
VCX3A-203ENST00000612369 PIK3CDO00329 1044 aa21.01■□□□□ 0.95
VCX3A-203ENST00000612369 CSF2RAP15509 400 aa21.01■□□□□ 0.95
VCX3A-203ENST00000612369 RXRAP19793 462 aa21.01■□□□□ 0.95
VCX3A-203ENST00000612369 PSRC1Q6PGN9 363 aaPredicted RBP21.01■□□□□ 0.95
VCX3A-203ENST00000612369 DHX37Q8IY37 1157 aaKnown RBP21.01■□□□□ 0.95
VCX3A-203ENST00000612369 NOC4LQ9BVI4 516 aaKnown RBP21.01■□□□□ 0.95
VCX3A-203ENST00000612369 RBM28Q9NW13 759 aaKnown RBP21.01■□□□□ 0.95
VCX3A-203ENST00000612369 FRMPD4Q14CM0 1322 aa21.01■□□□□ 0.95
VCX3A-203ENST00000612369 RGS20O76081 388 aa21■□□□□ 0.95
VCX3A-203ENST00000612369 CYP2C18P33260 490 aa21■□□□□ 0.95
VCX3A-203ENST00000612369 DGKDQ16760 1214 aa21■□□□□ 0.95
VCX3A-203ENST00000612369 GNPTABQ3T906 1256 aa21■□□□□ 0.95
VCX3A-203ENST00000612369 FAM47CQ5HY64 1035 aa21■□□□□ 0.95
VCX3A-203ENST00000612369 APOA5Q6Q788 366 aa21■□□□□ 0.95
VCX3A-203ENST00000612369 TMTC3Q6ZXV5 915 aa21■□□□□ 0.95
VCX3A-203ENST00000612369 MICU3Q86XE3 530 aa21■□□□□ 0.95
VCX3A-203ENST00000612369 SMARCC2Q8TAQ2 1214 aa21■□□□□ 0.95
VCX3A-203ENST00000612369 KCNB2Q92953 911 aa21■□□□□ 0.95
VCX3A-203ENST00000612369 BUD13Q9BRD0 619 aaKnown RBP eCLIP21■□□□□ 0.95
VCX3A-203ENST00000612369 IL23AQ9NPF7 189 aa21■□□□□ 0.95
VCX3A-203ENST00000612369 MTMR10Q9NXD2 777 aa21■□□□□ 0.95
VCX3A-203ENST00000612369 RCAN1P53805 252 aa20.99■□□□□ 0.95
VCX3A-203ENST00000612369 ADCK5Q3MIX3 580 aa20.99■□□□□ 0.95
VCX3A-203ENST00000612369 TMEM240Q5SV17 173 aa20.99■□□□□ 0.95
VCX3A-203ENST00000612369 XRRA1Q6P2D8 792 aa20.99■□□□□ 0.95
VCX3A-203ENST00000612369 Q7L0L9 218 aa20.99■□□□□ 0.95
VCX3A-203ENST00000612369 C16orf59Q7L2K0 433 aa20.99■□□□□ 0.95
VCX3A-203ENST00000612369 CMTR1Q8N1G2 835 aaKnown RBP20.99■□□□□ 0.95
VCX3A-203ENST00000612369 IL31RAQ8NI17 732 aa20.99■□□□□ 0.95
VCX3A-203ENST00000612369 PPTC7Q8NI37 304 aa20.99■□□□□ 0.95
VCX3A-203ENST00000612369 TRMT13Q9NUP7 481 aaKnown RBP20.99■□□□□ 0.95
VCX3A-203ENST00000612369 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.98■□□□□ 0.95
VCX3A-203ENST00000612369 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.98■□□□□ 0.95
VCX3A-203ENST00000612369 REC8O95072 547 aa20.98■□□□□ 0.95
VCX3A-203ENST00000612369 CELF3Q5SZQ8 465 aaKnown RBP20.98■□□□□ 0.95
VCX3A-203ENST00000612369 ZNF697Q5TEC3 545 aa20.98■□□□□ 0.95
VCX3A-203ENST00000612369 MYSM1Q5VVJ2 828 aa20.98■□□□□ 0.95
VCX3A-203ENST00000612369 SESTD1Q86VW0 696 aa20.98■□□□□ 0.95
VCX3A-203ENST00000612369 RPUSD2Q8IZ73 545 aaKnown RBP20.98■□□□□ 0.95
VCX3A-203ENST00000612369 KATNAL1Q9BW62 490 aa20.98■□□□□ 0.95
VCX3A-203ENST00000612369 MEIS2O14770 477 aa20.97■□□□□ 0.95
VCX3A-203ENST00000612369 ZBTB43O43298 467 aa20.97■□□□□ 0.95
VCX3A-203ENST00000612369 EPB41L2O43491 1005 aaKnown RBP20.97■□□□□ 0.95
VCX3A-203ENST00000612369 PPFIA4O75335 1185 aa20.97■□□□□ 0.95
VCX3A-203ENST00000612369 HOXD8P13378 290 aaPredicted RBP20.97■□□□□ 0.95
VCX3A-203ENST00000612369 ICAM3P32942 547 aa20.97■□□□□ 0.95
VCX3A-203ENST00000612369 HSPA4P34932 840 aa20.97■□□□□ 0.95
VCX3A-203ENST00000612369 ERICH6BQ5W0A0 696 aa20.97■□□□□ 0.95
VCX3A-203ENST00000612369 USP17L6PQ6QN14 398 aa20.97■□□□□ 0.95
VCX3A-203ENST00000612369 RAB11FIP4Q86YS3 637 aa20.97■□□□□ 0.95
VCX3A-203ENST00000612369 TEX2Q8IWB9 1127 aa20.97■□□□□ 0.95
VCX3A-203ENST00000612369 INPP4AQ96PE3 977 aaPredicted RBP20.97■□□□□ 0.95
VCX3A-203ENST00000612369 PSTPIP2Q9H939 334 aa20.97■□□□□ 0.95
VCX3A-203ENST00000612369 UMODL1Q5DID0 1318 aa20.97■□□□□ 0.95
VCX3A-203ENST00000612369 GGPS1O95749 300 aa20.96■□□□□ 0.95
VCX3A-203ENST00000612369 CCL23P55773 120 aa20.96■□□□□ 0.95
VCX3A-203ENST00000612369 MRPS9P82933 396 aaKnown RBP20.96■□□□□ 0.95
VCX3A-203ENST00000612369 RTN1Q16799 776 aa20.96■□□□□ 0.95
VCX3A-203ENST00000612369 RASIP1Q5U651 963 aa20.96■□□□□ 0.95
VCX3A-203ENST00000612369 PCNX4Q63HM2 1172 aa20.96■□□□□ 0.95
VCX3A-203ENST00000612369 ZNF365Q70YC5 407 aa20.96■□□□□ 0.95
VCX3A-203ENST00000612369 CCDC82Q8N4S0 544 aa20.96■□□□□ 0.95
VCX3A-203ENST00000612369 KAT2BQ92831 832 aa20.96■□□□□ 0.95
VCX3A-203ENST00000612369 TCEANC2Q96MN5 208 aa20.96■□□□□ 0.95
VCX3A-203ENST00000612369 WNT8AQ9H1J5 351 aa20.96■□□□□ 0.95
VCX3A-203ENST00000612369 MTIF3Q9H2K0 278 aaKnown RBP20.96■□□□□ 0.95
VCX3A-203ENST00000612369 BRPF3Q9ULD4 1205 aa20.96■□□□□ 0.95
VCX3A-203ENST00000612369 MYH7BA7E2Y1 1941 aa20.96■□□□□ 0.95
VCX3A-203ENST00000612369 TMEM265A0A087WTH1 108 aa20.95■□□□□ 0.94
VCX3A-203ENST00000612369 PITPNM1O00562 1244 aa20.95■□□□□ 0.94
VCX3A-203ENST00000612369 FGBP02675 491 aa20.95■□□□□ 0.94
VCX3A-203ENST00000612369 PFKMP08237 780 aa20.95■□□□□ 0.94
VCX3A-203ENST00000612369 ACRP10323 421 aa20.95■□□□□ 0.94
VCX3A-203ENST00000612369 CYP2C9P11712 490 aa20.95■□□□□ 0.94
VCX3A-203ENST00000612369 UBA1P22314 1058 aaKnown RBP20.95■□□□□ 0.94
VCX3A-203ENST00000612369 FGD1P98174 961 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms