RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 TPH2Q8IWU9 490 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 MYCT1Q8N699 235 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 SLC4A9Q96Q91 983 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 BARHL2Q9NY43 387 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 PCDHA1Q9Y5I3 950 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 GCOM1H8Y6P7 765 aaPredicted RBP7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 KRIT1O00522 736 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 CLIC2O15247 247 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 ORC4O43929 436 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 FLOT1O75955 427 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 NTSR2O95665 410 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 MYZAPP0CAP1 466 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 CYP2J2P51589 502 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 STXBP4Q6ZWJ1 553 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 RSRC2Q7L4I2 434 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 GIMAP7Q8NHV1 300 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 KIFC2Q96AC6 838 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 RIOK1Q9BRS2 568 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 LRRC1Q9BTT6 524 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 HSD3B7Q9H2F3 369 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 EHD2Q9NZN4 543 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 FAM184BQ9ULE4 1060 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 CAPN7Q9Y6W3 813 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 TNFAIP3P21580 790 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 CTNNA1P35221 906 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 CDKAL1Q5VV42 579 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 B4GALNT4Q76KP1 1039 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 FNBP4Q8N3X1 1017 aaPredicted RBP7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 MS4A14Q96JA4 679 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 AP1M1Q9BXS5 423 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 ANKZF1Q9H8Y5 726 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 COL4A3BPQ9Y5P4 624 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 FAM205AQ6ZU69 1335 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 ZRANB2O95218 330 aaKnown RBP eCLIP7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 MYL1P05976 194 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 TMEM132AQ24JP5 1023 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 C12orf60Q5U649 245 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 KIAA0825Q8IV33 1275 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 CCDC155Q8N6L0 562 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 CCDC26Q8TAB7 109 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 COG1Q8WTW3 980 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 SCLT1Q96NL6 688 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 NT5C3AQ9H0P0 336 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 MAGEF1Q9HAY2 307 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 L1RE1Q9UN81 338 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 FAM196BA6NMK8 535 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 EIF3CLB5ME19 914 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 USP17L15C9J2P7 530 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 USP17L13C9JLJ4 530 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 USP17L11C9JVI0 530 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 USP17L18D6R9N7 530 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 USP17L22D6RA61 530 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 USP17L17D6RBQ6 530 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 USP17L19D6RCP7 530 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 USP17L20D6RJB6 530 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 E9PMD0 336 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 PALMO75781 387 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 USP17L24Q0WX57 530 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 NNTQ13423 1086 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 GRM4Q14833 912 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 TNIP1Q15025 636 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 EXOC3L4Q17RC7 722 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 TBC1D10BQ4KMP7 808 aaPredicted RBP7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 USP17L6PQ6QN14 398 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 C3orf67Q6ZVT6 689 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 TXNRD3Q86VQ6 643 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 SPICE1Q8N0Z3 855 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 PROCA1Q8NCQ7 364 aaPredicted RBP7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 SPATA4Q8NEY3 305 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 RBM17Q96I25 401 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 OSBPL9Q96SU4 736 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 EIF3CQ99613 913 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 PAIP2Q9BPZ3 127 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 TAOK3Q9H2K8 898 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 TSKSQ9UJT2 592 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 A0A1W2PQC6 194 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 LRRIQ3A6PVS8 624 aaPredicted RBP7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 SFI1A8K8P3 1242 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 GOLGA8KD6RF30 607 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 CCDC172P0C7W6 258 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 SRGNP10124 158 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 EPHB4P54760 987 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 UBXN2AP68543 259 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 SP4Q02446 784 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 SEPT7Q16181 437 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 E2F4Q16254 413 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 FAM196AQ6ZSG2 479 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 LRRC45Q96CN5 670 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 CABS1Q96KC9 395 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 PLCD4Q9BRC7 762 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 NUCKS1Q9H1E3 243 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 STIM2Q9P246 746 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 CTTNBP2NLQ9P2B4 639 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 FRMD4BQ9Y2L6 1034 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 ITIH6Q6UXX5 1313 aa7.55□□□□□ -1.2
SYNPO2-206ENST00000610556 RNF225M0QZC1 329 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 CALUO43852 315 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 EXOC3O60645 756 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 PPFIA4O75335 1185 aa7.54□□□□□ -1.2
SYNPO2-206ENST00000610556 VIMP08670 466 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 988.6 ms