RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 TBX21Q9UL17 535 aa25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 CNTNAP5Q8WYK1 1306 aa25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 DOCK5Q9H7D0 1870 aa25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 KLF18A0A0U1RQI7 1052 aa25.77■■□□□ 1.72
GTF2F1-204ENST00000594965 A6NJR5 290 aa25.77■■□□□ 1.72
GTF2F1-204ENST00000594965 MEIS2O14770 477 aa25.77■■□□□ 1.72
GTF2F1-204ENST00000594965 Q6ZUG5 572 aa25.77■■□□□ 1.72
GTF2F1-204ENST00000594965 USP26Q9BXU7 913 aa25.77■■□□□ 1.72
GTF2F1-204ENST00000594965 POLR3EQ9NVU0 708 aa25.77■■□□□ 1.72
GTF2F1-204ENST00000594965 RBM28Q9NW13 759 aaKnown RBP25.77■■□□□ 1.72
GTF2F1-204ENST00000594965 FRMPD4Q14CM0 1322 aa25.77■■□□□ 1.72
GTF2F1-204ENST00000594965 CD4P01730 458 aa25.76■■□□□ 1.71
GTF2F1-204ENST00000594965 MYL3P08590 195 aa25.76■■□□□ 1.71
GTF2F1-204ENST00000594965 ARHGAP1Q07960 439 aa25.76■■□□□ 1.71
GTF2F1-204ENST00000594965 RTN1Q16799 776 aa25.76■■□□□ 1.71
GTF2F1-204ENST00000594965 USP17L6PQ6QN14 398 aa25.76■■□□□ 1.71
GTF2F1-204ENST00000594965 BLOC1S2Q6QNY1 142 aa25.76■■□□□ 1.71
GTF2F1-204ENST00000594965 ZFP91Q96JP5 570 aaPredicted RBP25.76■■□□□ 1.71
GTF2F1-204ENST00000594965 PIK3CDO00329 1044 aa25.75■■□□□ 1.71
GTF2F1-204ENST00000594965 RPS6KB1P23443 525 aa25.75■■□□□ 1.71
GTF2F1-204ENST00000594965 CDC27P30260 824 aa25.75■■□□□ 1.71
GTF2F1-204ENST00000594965 FBXL16Q8N461 479 aa25.75■■□□□ 1.71
GTF2F1-204ENST00000594965 GOLGA8AA7E2F4 631 aa25.74■■□□□ 1.71
GTF2F1-204ENST00000594965 GOLGA8BA8MQT2 603 aa25.74■■□□□ 1.71
GTF2F1-204ENST00000594965 GH1P01241 217 aa25.74■■□□□ 1.71
GTF2F1-204ENST00000594965 RCAN1P53805 252 aa25.74■■□□□ 1.71
GTF2F1-204ENST00000594965 APOBRQ0VD83 1088 aa25.74■■□□□ 1.71
GTF2F1-204ENST00000594965 AGXT2Q9BYV1 514 aa25.74■■□□□ 1.71
GTF2F1-204ENST00000594965 MRVI1Q9Y6F6 885 aa25.74■■□□□ 1.71
GTF2F1-204ENST00000594965 RAG1P15918 1043 aa25.73■■□□□ 1.71
GTF2F1-204ENST00000594965 CCND2P30279 289 aa25.73■■□□□ 1.71
GTF2F1-204ENST00000594965 MRPS9P82933 396 aaKnown RBP25.73■■□□□ 1.71
GTF2F1-204ENST00000594965 LRIT3Q3SXY7 679 aa25.73■■□□□ 1.71
GTF2F1-204ENST00000594965 SMARCC2Q8TAQ2 1214 aa25.73■■□□□ 1.71
GTF2F1-204ENST00000594965 AFG1LQ8WV93 481 aa25.73■■□□□ 1.71
GTF2F1-204ENST00000594965 GPKOWQ92917 476 aaPredicted RBP eCLIP25.73■■□□□ 1.71
GTF2F1-204ENST00000594965 BRF1Q92994 677 aa25.73■■□□□ 1.71
GTF2F1-204ENST00000594965 LRCH3Q96II8 777 aa25.73■■□□□ 1.71
GTF2F1-204ENST00000594965 MTG1Q9BT17 334 aaPredicted RBP25.73■■□□□ 1.71
GTF2F1-204ENST00000594965 TIMP1P01033 207 aa25.72■■□□□ 1.71
GTF2F1-204ENST00000594965 MMP3P08254 477 aa25.72■■□□□ 1.71
GTF2F1-204ENST00000594965 CASTP20810 708 aaKnown RBP25.72■■□□□ 1.71
GTF2F1-204ENST00000594965 PSMA5P28066 241 aa25.72■■□□□ 1.71
GTF2F1-204ENST00000594965 FGD1P98174 961 aa25.72■■□□□ 1.71
GTF2F1-204ENST00000594965 BRDTQ58F21 947 aaPredicted RBP25.72■■□□□ 1.71
GTF2F1-204ENST00000594965 EMID1Q96A84 441 aaPredicted RBP25.72■■□□□ 1.71
GTF2F1-204ENST00000594965 SEZ6LQ9BYH1 1024 aa25.72■■□□□ 1.71
GTF2F1-204ENST00000594965 TLR3O15455 904 aaKnown RBP25.71■■□□□ 1.71
GTF2F1-204ENST00000594965 B4GALT4O60513 344 aa25.71■■□□□ 1.71
GTF2F1-204ENST00000594965 EPHB4P54760 987 aa25.71■■□□□ 1.71
GTF2F1-204ENST00000594965 SP2Q02086 613 aa25.71■■□□□ 1.71
GTF2F1-204ENST00000594965 WWC2Q6AWC2 1192 aa25.71■■□□□ 1.71
GTF2F1-204ENST00000594965 TYW1BQ6NUM6 668 aa25.71■■□□□ 1.71
GTF2F1-204ENST00000594965 CUL5Q93034 780 aa25.71■■□□□ 1.71
GTF2F1-204ENST00000594965 TRPV6Q9H1D0 765 aa25.71■■□□□ 1.71
GTF2F1-204ENST00000594965 PSTPIP2Q9H939 334 aa25.71■■□□□ 1.71
GTF2F1-204ENST00000594965 NID2Q14112 1375 aa25.7■■□□□ 1.71
GTF2F1-204ENST00000594965 KPNA6O60684 536 aa25.7■■□□□ 1.7
GTF2F1-204ENST00000594965 ADD1P35611 737 aaKnown RBP25.7■■□□□ 1.7
GTF2F1-204ENST00000594965 SHHQ15465 462 aa25.7■■□□□ 1.7
GTF2F1-204ENST00000594965 C9orf50Q5SZB4 431 aa25.7■■□□□ 1.7
GTF2F1-204ENST00000594965 HEATR3Q7Z4Q2 680 aa25.7■■□□□ 1.7
GTF2F1-204ENST00000594965 PPP1R13LQ8WUF5 828 aa25.7■■□□□ 1.7
GTF2F1-204ENST00000594965 ALDH8A1Q9H2A2 487 aaPredicted RBP25.7■■□□□ 1.7
GTF2F1-204ENST00000594965 ZSWIM6Q9HCJ5 1215 aa25.7■■□□□ 1.7
GTF2F1-204ENST00000594965 V9GY48 417 aaPredicted RBP25.7■■□□□ 1.7
GTF2F1-204ENST00000594965 METAP2P50579 478 aaKnown RBP eCLIP25.69■■□□□ 1.7
GTF2F1-204ENST00000594965 NBPF20Q3BBV1 942 aa25.69■■□□□ 1.7
GTF2F1-204ENST00000594965 KCNV1Q6PIU1 500 aa25.69■■□□□ 1.7
GTF2F1-204ENST00000594965 NAP1L2Q9ULW6 460 aaPredicted RBP25.69■■□□□ 1.7
GTF2F1-204ENST00000594965 SEMA3FQ13275 785 aa25.68■■□□□ 1.7
GTF2F1-204ENST00000594965 LAMC2Q13753 1193 aa25.68■■□□□ 1.7
GTF2F1-204ENST00000594965 UBE2SQ16763 222 aa25.68■■□□□ 1.7
GTF2F1-204ENST00000594965 MYSM1Q5VVJ2 828 aa25.68■■□□□ 1.7
GTF2F1-204ENST00000594965 MFSD5Q6N075 450 aa25.68■■□□□ 1.7
GTF2F1-204ENST00000594965 RUFY3Q7L099 469 aa25.68■■□□□ 1.7
GTF2F1-204ENST00000594965 KAT2BQ92831 832 aa25.68■■□□□ 1.7
GTF2F1-204ENST00000594965 INPP4AQ96PE3 977 aaPredicted RBP25.68■■□□□ 1.7
GTF2F1-204ENST00000594965 PPP1R12CQ9BZL4 782 aa25.68■■□□□ 1.7
GTF2F1-204ENST00000594965 RTEL1Q9NZ71 1219 aa25.68■■□□□ 1.7
GTF2F1-204ENST00000594965 SZT2Q5T011 3432 aa25.68■■□□□ 1.7
GTF2F1-204ENST00000594965 TGFB3P10600 412 aa25.67■■□□□ 1.7
GTF2F1-204ENST00000594965 UBA1P22314 1058 aaKnown RBP25.67■■□□□ 1.7
GTF2F1-204ENST00000594965 ICAM3P32942 547 aa25.67■■□□□ 1.7
GTF2F1-204ENST00000594965 EVCP57679 992 aa25.67■■□□□ 1.7
GTF2F1-204ENST00000594965 FPGSQ05932 587 aa25.67■■□□□ 1.7
GTF2F1-204ENST00000594965 CELF3Q5SZQ8 465 aaKnown RBP25.67■■□□□ 1.7
GTF2F1-204ENST00000594965 PCNX4Q63HM2 1172 aa25.67■■□□□ 1.7
GTF2F1-204ENST00000594965 DHX37Q8IY37 1157 aaKnown RBP25.67■■□□□ 1.7
GTF2F1-204ENST00000594965 BCAS3Q9H6U6 928 aa25.67■■□□□ 1.7
GTF2F1-204ENST00000594965 TRMT13Q9NUP7 481 aaKnown RBP25.67■■□□□ 1.7
GTF2F1-204ENST00000594965 LAMA3Q16787 3333 aa25.66■■□□□ 1.7
GTF2F1-204ENST00000594965 UMODL1Q5DID0 1318 aa25.66■■□□□ 1.7
GTF2F1-204ENST00000594965 STXBP3O00186 592 aa25.66■■□□□ 1.7
GTF2F1-204ENST00000594965 SORBS3O60504 671 aa25.66■■□□□ 1.7
GTF2F1-204ENST00000594965 STAM2O75886 525 aa25.66■■□□□ 1.7
GTF2F1-204ENST00000594965 GGPS1O95749 300 aa25.66■■□□□ 1.7
GTF2F1-204ENST00000594965 TOB2Q14106 344 aaPredicted RBP25.66■■□□□ 1.7
GTF2F1-204ENST00000594965 NFRKBQ6P4R8 1299 aa25.66■■□□□ 1.7
GTF2F1-204ENST00000594965 PPTC7Q8NI37 304 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms