RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 TSEN34Q9BSV6 310 aaKnown RBP29.54■■■□□ 2.32
TRIM28-204ENST00000594806 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.53■■■□□ 2.32
TRIM28-204ENST00000594806 ADAMTS4O75173 837 aa29.53■■■□□ 2.32
TRIM28-204ENST00000594806 CST5P28325 142 aaPredicted RBP29.53■■■□□ 2.32
TRIM28-204ENST00000594806 MCM2P49736 904 aa29.53■■■□□ 2.32
TRIM28-204ENST00000594806 UBE2SQ16763 222 aa29.53■■■□□ 2.32
TRIM28-204ENST00000594806 PCNX4Q63HM2 1172 aa29.53■■■□□ 2.32
TRIM28-204ENST00000594806 NECAB1Q8N987 351 aa29.53■■■□□ 2.32
TRIM28-204ENST00000594806 C11orf49Q9H6J7 331 aa29.53■■■□□ 2.32
TRIM28-204ENST00000594806 PCDHA6Q9UN73 950 aa29.53■■■□□ 2.32
TRIM28-204ENST00000594806 PCDHA8Q9Y5H6 950 aa29.53■■■□□ 2.32
TRIM28-204ENST00000594806 SYNRGQ9UMZ2 1314 aa29.52■■■□□ 2.32
TRIM28-204ENST00000594806 ADCY6O43306 1168 aa29.52■■■□□ 2.32
TRIM28-204ENST00000594806 PPFIA3O75145 1194 aa29.52■■■□□ 2.32
TRIM28-204ENST00000594806 PGK1P00558 417 aa29.52■■■□□ 2.32
TRIM28-204ENST00000594806 XBP1P17861 261 aa29.52■■■□□ 2.32
TRIM28-204ENST00000594806 CLK2P49760 499 aaKnown RBP29.52■■■□□ 2.32
TRIM28-204ENST00000594806 GALNT17Q6IS24 598 aa29.52■■■□□ 2.32
TRIM28-204ENST00000594806 KLHDC9Q8NEP7 349 aa29.52■■■□□ 2.32
TRIM28-204ENST00000594806 AP5M1Q9H0R1 490 aa29.52■■■□□ 2.32
TRIM28-204ENST00000594806 CTDNEP1O95476 244 aa29.51■■■□□ 2.31
TRIM28-204ENST00000594806 TGFB3P10600 412 aa29.51■■■□□ 2.31
TRIM28-204ENST00000594806 COL6A1P12109 1028 aa29.51■■■□□ 2.31
TRIM28-204ENST00000594806 GNPTABQ3T906 1256 aa29.51■■■□□ 2.31
TRIM28-204ENST00000594806 GJC2Q5T442 439 aaPredicted RBP29.51■■■□□ 2.31
TRIM28-204ENST00000594806 SEPT14Q6ZU15 432 aa29.51■■■□□ 2.31
TRIM28-204ENST00000594806 TLK2Q86UE8 772 aa29.51■■■□□ 2.31
TRIM28-204ENST00000594806 PCSK9Q8NBP7 692 aaKnown RBP29.51■■■□□ 2.31
TRIM28-204ENST00000594806 LENG1Q96BZ8 264 aaPredicted RBP29.51■■■□□ 2.31
TRIM28-204ENST00000594806 LLPHQ9BRT6 129 aaKnown RBP29.51■■■□□ 2.31
TRIM28-204ENST00000594806 HTATIP2Q9BUP3 242 aa29.51■■■□□ 2.31
TRIM28-204ENST00000594806 TXNP10599 105 aaKnown RBP29.5■■■□□ 2.31
TRIM28-204ENST00000594806 CCDC62Q6P9F0 684 aa29.5■■■□□ 2.31
TRIM28-204ENST00000594806 IL31RAQ8NI17 732 aa29.5■■■□□ 2.31
TRIM28-204ENST00000594806 DIS3LQ8TF46 1054 aaKnown RBP29.5■■■□□ 2.31
TRIM28-204ENST00000594806 VPS54Q9P1Q0 977 aa29.5■■■□□ 2.31
TRIM28-204ENST00000594806 ORC3Q9UBD5 711 aaPredicted RBP29.5■■■□□ 2.31
TRIM28-204ENST00000594806 C6orf222P0C671 652 aaPredicted RBP29.49■■■□□ 2.31
TRIM28-204ENST00000594806 NLRP5P59047 1200 aa29.49■■■□□ 2.31
TRIM28-204ENST00000594806 REXO1Q8N1G1 1221 aaKnown RBP29.49■■■□□ 2.31
TRIM28-204ENST00000594806 NSUN7Q8NE18 718 aaKnown RBP29.49■■■□□ 2.31
TRIM28-204ENST00000594806 MOXD2PA6NHM9 499 aa29.48■■■□□ 2.31
TRIM28-204ENST00000594806 DYNC1LI2O43237 492 aaPredicted RBP29.48■■■□□ 2.31
TRIM28-204ENST00000594806 MRPS9P82933 396 aaKnown RBP29.48■■■□□ 2.31
TRIM28-204ENST00000594806 INPP4AQ96PE3 977 aaPredicted RBP29.48■■■□□ 2.31
TRIM28-204ENST00000594806 ANO3Q9BYT9 981 aa29.48■■■□□ 2.31
TRIM28-204ENST00000594806 PHF24Q9UPV7 400 aa29.48■■■□□ 2.31
TRIM28-204ENST00000594806 MRVI1Q9Y6F6 885 aa29.48■■■□□ 2.31
TRIM28-204ENST00000594806 ZEB2O60315 1214 aa29.47■■■□□ 2.31
TRIM28-204ENST00000594806 MYCNP04198 464 aaPredicted RBP29.47■■■□□ 2.31
TRIM28-204ENST00000594806 ICAM3P32942 547 aa29.47■■■□□ 2.31
TRIM28-204ENST00000594806 BRDTQ58F21 947 aaPredicted RBP29.47■■■□□ 2.31
TRIM28-204ENST00000594806 GNASQ5JWF2 1037 aa29.47■■■□□ 2.31
TRIM28-204ENST00000594806 CCSAPQ6IQ19 270 aaPredicted RBP29.47■■■□□ 2.31
TRIM28-204ENST00000594806 DDX41Q9UJV9 622 aaKnown RBP29.47■■■□□ 2.31
TRIM28-204ENST00000594806 RGS20O76081 388 aa29.46■■■□□ 2.31
TRIM28-204ENST00000594806 FSCN1Q16658 493 aaKnown RBP29.46■■■□□ 2.31
TRIM28-204ENST00000594806 NLRX1Q86UT6 975 aa29.46■■■□□ 2.31
TRIM28-204ENST00000594806 DAGLBQ8NCG7 672 aa29.46■■■□□ 2.31
TRIM28-204ENST00000594806 CDHR1Q96JP9 859 aa29.46■■■□□ 2.31
TRIM28-204ENST00000594806 PCDHA4Q9UN74 947 aa29.46■■■□□ 2.31
TRIM28-204ENST00000594806 MAFGO15525 162 aa29.45■■■□□ 2.31
TRIM28-204ENST00000594806 ARIH2O95376 493 aa29.45■■■□□ 2.31
TRIM28-204ENST00000594806 GH1P01241 217 aa29.45■■■□□ 2.31
TRIM28-204ENST00000594806 SREBF1P36956 1147 aa29.45■■■□□ 2.31
TRIM28-204ENST00000594806 CPT1AP50416 773 aa29.45■■■□□ 2.31
TRIM28-204ENST00000594806 OR6J1Q8NGC5 347 aa29.45■■■□□ 2.31
TRIM28-204ENST00000594806 SENP6Q9GZR1 1112 aaPredicted RBP29.45■■■□□ 2.31
TRIM28-204ENST00000594806 CTAGE5O15320 804 aa29.44■■■□□ 2.3
TRIM28-204ENST00000594806 FIBPO43427 364 aa29.44■■■□□ 2.3
TRIM28-204ENST00000594806 FDPSP14324 419 aaKnown RBP29.44■■■□□ 2.3
TRIM28-204ENST00000594806 ST3GAL1Q11201 340 aa29.44■■■□□ 2.3
TRIM28-204ENST00000594806 KCNA10Q16322 511 aa29.44■■■□□ 2.3
TRIM28-204ENST00000594806 JAKMIP3Q5VZ66 844 aa29.44■■■□□ 2.3
TRIM28-204ENST00000594806 CCDC83Q8IWF9 413 aa29.44■■■□□ 2.3
TRIM28-204ENST00000594806 EMID1Q96A84 441 aaPredicted RBP29.44■■■□□ 2.3
TRIM28-204ENST00000594806 GPRASP2Q96D09 838 aa29.44■■■□□ 2.3
TRIM28-204ENST00000594806 AIFM3Q96NN9 605 aa29.44■■■□□ 2.3
TRIM28-204ENST00000594806 ALG1Q9BT22 464 aa29.44■■■□□ 2.3
TRIM28-204ENST00000594806 SPATA31C2B4DYI2 1134 aa29.43■■■□□ 2.3
TRIM28-204ENST00000594806 ACLYP53396 1101 aa29.43■■■□□ 2.3
TRIM28-204ENST00000594806 HMGN5P82970 282 aaKnown RBP29.43■■■□□ 2.3
TRIM28-204ENST00000594806 LY6KQ17RY6 165 aa29.43■■■□□ 2.3
TRIM28-204ENST00000594806 TMEM63BQ5T3F8 832 aa29.43■■■□□ 2.3
TRIM28-204ENST00000594806 TMEM260Q9NX78 707 aa29.43■■■□□ 2.3
TRIM28-204ENST00000594806 RTEL1Q9NZ71 1219 aa29.43■■■□□ 2.3
TRIM28-204ENST00000594806 UBIAD1Q9Y5Z9 338 aa29.43■■■□□ 2.3
TRIM28-204ENST00000594806 MYH7BA7E2Y1 1941 aa29.42■■■□□ 2.3
TRIM28-204ENST00000594806 MYADML2A6NDP7 307 aa29.42■■■□□ 2.3
TRIM28-204ENST00000594806 KPNA6O60684 536 aa29.42■■■□□ 2.3
TRIM28-204ENST00000594806 CABYRO75952 493 aa29.42■■■□□ 2.3
TRIM28-204ENST00000594806 LAMC2Q13753 1193 aa29.42■■■□□ 2.3
TRIM28-204ENST00000594806 BLIDQ8IZY5 108 aa29.42■■■□□ 2.3
TRIM28-204ENST00000594806 PHF20Q9BVI0 1012 aa29.42■■■□□ 2.3
TRIM28-204ENST00000594806 ASGR1P07306 291 aa29.41■■■□□ 2.3
TRIM28-204ENST00000594806 CYP3A4P08684 503 aa29.41■■■□□ 2.3
TRIM28-204ENST00000594806 ARHGAP4P98171 946 aa29.41■■■□□ 2.3
TRIM28-204ENST00000594806 NEDD9Q14511 834 aa29.41■■■□□ 2.3
TRIM28-204ENST00000594806 GIMAP8Q8ND71 665 aaPredicted RBP29.41■■■□□ 2.3
TRIM28-204ENST00000594806 GLT1D1Q96MS3 346 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms