RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 F5H6K3 240 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 FOSP01100 380 aaPredicted RBP21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 IDEP14735 1019 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 ZBED6P86452 979 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 KLRC3Q07444 240 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 GRIPAP1Q4V328 841 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 GPR161Q8N6U8 529 aaKnown RBP21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 PCMTD1Q96MG8 357 aaPredicted RBP21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 MBOAT7Q96N66 472 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 SLF1Q9BQI6 1058 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 PCDHAC2Q9Y5I4 1007 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 STK24Q9Y6E0 443 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 A0A1W2PQJ5 194 aa21.34■■□□□ 1.01
PRKCSH-209ENST00000589838 FAM196BA6NMK8 535 aa21.34■■□□□ 1.01
PRKCSH-209ENST00000589838 CYLC1P35663 651 aaPredicted RBP21.34■■□□□ 1.01
PRKCSH-209ENST00000589838 KRT83P78385 493 aa21.34■■□□□ 1.01
PRKCSH-209ENST00000589838 AOC3Q16853 763 aa21.34■■□□□ 1.01
PRKCSH-209ENST00000589838 CEP112Q8N8E3 955 aa21.34■■□□□ 1.01
PRKCSH-209ENST00000589838 NUDT12Q9BQG2 462 aa21.34■■□□□ 1.01
PRKCSH-209ENST00000589838 ZNF219Q9P2Y4 722 aaPredicted RBP21.34■■□□□ 1.01
PRKCSH-209ENST00000589838 USP17L15C9J2P7 530 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 USP17L13C9JLJ4 530 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 USP17L11C9JVI0 530 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 USP17L18D6R9N7 530 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 USP17L22D6RA61 530 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 USP17L17D6RBQ6 530 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 USP17L19D6RCP7 530 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 USP17L20D6RJB6 530 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 EHHADHQ08426 723 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 USP17L24Q0WX57 530 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 TRAF1Q13077 416 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 BMS1Q14692 1282 aaKnown RBP21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 MEA1Q16626 185 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 USP17L6PQ6QN14 398 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 FBXO11Q86XK2 927 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 SIAH1Q8IUQ4 282 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 C7orf43Q8WVR3 580 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 GOLGA1Q92805 767 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 CHP1Q99653 195 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 IRX2Q9BZI1 471 aaPredicted RBP21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 HAUS4Q9H6D7 363 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 CDC23Q9UJX2 597 aa21.33■■□□□ 1.01
PRKCSH-209ENST00000589838 TBX3O15119 743 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 KIF4BQ2VIQ3 1234 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 MIIPQ5JXC2 388 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 TEX2Q8IWB9 1127 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 CCDC170Q8IYT3 715 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 RABGGTAQ92696 567 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 TTYH3Q9C0H2 523 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 TDRD3Q9H7E2 651 aaKnown RBP21.32■■□□□ 1
PRKCSH-209ENST00000589838 KCNMB3Q9NPA1 279 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 TMOD2Q9NZR1 351 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 KIF20AO95235 890 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 SLURP2P0DP57 97 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 CDK17Q00537 523 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 MAN2A1Q16706 1144 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 VWA3BQ502W6 1294 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 SYDE2Q5VT97 1194 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 ZNF662Q6ZS27 426 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 RSRC2Q7L4I2 434 aaKnown RBP21.32■■□□□ 1
PRKCSH-209ENST00000589838 CCDC65Q8IXS2 484 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 MYOCDQ8IZQ8 938 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 HPS3Q969F9 1004 aa21.32■■□□□ 1
PRKCSH-209ENST00000589838 NAPGQ99747 312 aaPredicted RBP21.32■■□□□ 1
PRKCSH-209ENST00000589838 IPO7O95373 1038 aaKnown RBP21.31■■□□□ 1
PRKCSH-209ENST00000589838 BMP3P12645 472 aa21.31■■□□□ 1
PRKCSH-209ENST00000589838 CHRNA5P30532 468 aa21.31■■□□□ 1
PRKCSH-209ENST00000589838 ARHGAP25P42331 645 aa21.31■■□□□ 1
PRKCSH-209ENST00000589838 IKQ13123 557 aaPredicted RBP21.31■■□□□ 1
PRKCSH-209ENST00000589838 BTNL9Q6UXG8 535 aa21.31■■□□□ 1
PRKCSH-209ENST00000589838 KCNK18Q7Z418 384 aa21.31■■□□□ 1
PRKCSH-209ENST00000589838 CCDC84Q86UT8 332 aaPredicted RBP21.31■■□□□ 1
PRKCSH-209ENST00000589838 ERMNQ8TAM6 284 aa21.31■■□□□ 1
PRKCSH-209ENST00000589838 PANK4Q9NVE7 773 aa21.31■■□□□ 1
PRKCSH-209ENST00000589838 HERC5Q9UII4 1024 aaKnown RBP21.31■■□□□ 1
PRKCSH-209ENST00000589838 MEIS2O14770 477 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 GDF11O95390 407 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 NDUFB10O96000 172 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 MMP14P50281 582 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 HAUS3Q68CZ6 603 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 TMCO3Q6UWJ1 677 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 SRGAP1Q7Z6B7 1085 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 SLC35F6Q8N357 371 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 DNAJC19Q96DA6 116 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 SPDYE3A6NKU9 549 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 CLCN6P51797 869 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 ARHGAP4P98171 946 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 COASYQ13057 564 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 ECM1Q16610 540 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 Q4G0T1 1027 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 WDR59Q6PJI9 974 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 KRT222Q8N1A0 295 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 NDST4Q9H3R1 872 aa21.3■■□□□ 1
PRKCSH-209ENST00000589838 A0A0U1RQJ8 604 aa21.29■■□□□ 1
PRKCSH-209ENST00000589838 PPIP5K2O43314 1243 aa21.29■■□□□ 1
PRKCSH-209ENST00000589838 FAM26FQ5R3K3 315 aa21.29■■□□□ 1
PRKCSH-209ENST00000589838 TEX35Q5T0J7 233 aa21.29■■□□□ 1
PRKCSH-209ENST00000589838 EHBP1Q8NDI1 1231 aa21.29■■□□□ 1
PRKCSH-209ENST00000589838 ATRIPQ8WXE1 791 aa21.29■■□□□ 1
PRKCSH-209ENST00000589838 KIAA1024Q9UPX6 916 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms