RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 EPB41L2O43491 1005 aaKnown RBP12.02□□□□□ -0.49
SDF2-208ENST00000589788 SNAI1O95863 264 aaPredicted RBP12.02□□□□□ -0.49
SDF2-208ENST00000589788 RARBP10826 455 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 AKR1A1P14550 325 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 CALML3P27482 149 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 GNAQP50148 359 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 TRAF1Q13077 416 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 COL9A3Q14050 684 aaPredicted RBP12.02□□□□□ -0.49
SDF2-208ENST00000589788 ANO1Q5XXA6 986 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 MCF2L2Q86YR7 1114 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 CCDC144CPQ8IYA2 1237 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 ARRDC4Q8NCT1 418 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 DPF3Q92784 378 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 FGD4Q96M96 766 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 TCEANC2Q96MN5 208 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 JAKMIP1Q96N16 626 aaKnown RBP12.02□□□□□ -0.49
SDF2-208ENST00000589788 MPHOSPH6Q99547 160 aaKnown RBP12.02□□□□□ -0.49
SDF2-208ENST00000589788 AMNQ9BXJ7 453 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 C11orf49Q9H6J7 331 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 SNX14Q9Y5W7 946 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 BAZ2BQ9UIF8 2168 aaKnown RBP12.02□□□□□ -0.49
SDF2-208ENST00000589788 ACTN4O43707 911 aaKnown RBP12.01□□□□□ -0.49
SDF2-208ENST00000589788 ZNF865P0CJ78 1059 aaPredicted RBP12.01□□□□□ -0.49
SDF2-208ENST00000589788 RPS6P62753 249 aaKnown RBP12.01□□□□□ -0.49
SDF2-208ENST00000589788 EXOSC10Q01780 885 aaKnown RBP12.01□□□□□ -0.49
SDF2-208ENST00000589788 ACVR2BQ13705 512 aa12.01□□□□□ -0.49
SDF2-208ENST00000589788 KMT5BQ4FZB7 885 aa12.01□□□□□ -0.49
SDF2-208ENST00000589788 BLOC1S2Q6QNY1 142 aa12.01□□□□□ -0.49
SDF2-208ENST00000589788 SLC30A10Q6XR72 485 aa12.01□□□□□ -0.49
SDF2-208ENST00000589788 SGMS1Q86VZ5 419 aa12.01□□□□□ -0.49
SDF2-208ENST00000589788 RGS22Q8NE09 1264 aa12.01□□□□□ -0.49
SDF2-208ENST00000589788 KCNB2Q92953 911 aa12.01□□□□□ -0.49
SDF2-208ENST00000589788 MTMR8Q96EF0 704 aa12.01□□□□□ -0.49
SDF2-208ENST00000589788 PIGSQ96S52 555 aa12.01□□□□□ -0.49
SDF2-208ENST00000589788 LZTS2Q9BRK4 669 aa12.01□□□□□ -0.49
SDF2-208ENST00000589788 RIOX1Q9H6W3 641 aa12.01□□□□□ -0.49
SDF2-208ENST00000589788 FAM184BQ9ULE4 1060 aa12.01□□□□□ -0.49
SDF2-208ENST00000589788 PCDHA1Q9Y5I3 950 aa12.01□□□□□ -0.49
SDF2-208ENST00000589788 LCTP09848 1927 aa12□□□□□ -0.49
SDF2-208ENST00000589788 PNMA6FA0A0J9YX94 578 aa12□□□□□ -0.49
SDF2-208ENST00000589788 B4DLN1 442 aa12□□□□□ -0.49
SDF2-208ENST00000589788 KBTBD13C9JR72 458 aa12□□□□□ -0.49
SDF2-208ENST00000589788 DNM1LO00429 736 aa12□□□□□ -0.49
SDF2-208ENST00000589788 RXRAP19793 462 aa12□□□□□ -0.49
SDF2-208ENST00000589788 PSMA5P28066 241 aa12□□□□□ -0.49
SDF2-208ENST00000589788 MRPL12P52815 198 aaKnown RBP12□□□□□ -0.49
SDF2-208ENST00000589788 CCDC144BQ3MJ40 725 aa12□□□□□ -0.49
SDF2-208ENST00000589788 MICU3Q86XE3 530 aa12□□□□□ -0.49
SDF2-208ENST00000589788 RAB11FIP4Q86YS3 637 aa12□□□□□ -0.49
SDF2-208ENST00000589788 HOMEZQ8IX15 550 aa12□□□□□ -0.49
SDF2-208ENST00000589788 FANCBQ8NB91 859 aa12□□□□□ -0.49
SDF2-208ENST00000589788 PIBF1Q8WXW3 757 aa12□□□□□ -0.49
SDF2-208ENST00000589788 RRP36Q96EU6 259 aaKnown RBP12□□□□□ -0.49
SDF2-208ENST00000589788 PURBQ96QR8 312 aaKnown RBP12□□□□□ -0.49
SDF2-208ENST00000589788 SPZ1Q9BXG8 430 aa12□□□□□ -0.49
SDF2-208ENST00000589788 MAF1Q9H063 256 aa12□□□□□ -0.49
SDF2-208ENST00000589788 XPNPEP3Q9NQH7 507 aa12□□□□□ -0.49
SDF2-208ENST00000589788 SEC63Q9UGP8 760 aaKnown RBP12□□□□□ -0.49
SDF2-208ENST00000589788 NAP1L2Q9ULW6 460 aaPredicted RBP12□□□□□ -0.49
SDF2-208ENST00000589788 ASTN1O14525 1302 aa11.99□□□□□ -0.49
SDF2-208ENST00000589788 LOC102724159A0A0B4J2E5 919 aa11.99□□□□□ -0.49
SDF2-208ENST00000589788 ZBTB43O43298 467 aa11.99□□□□□ -0.49
SDF2-208ENST00000589788 CYTH3O43739 400 aa11.99□□□□□ -0.49
SDF2-208ENST00000589788 EIF5BO60841 1220 aaKnown RBP11.99□□□□□ -0.49
SDF2-208ENST00000589788 GPR37L1O60883 481 aa11.99□□□□□ -0.49
SDF2-208ENST00000589788 CFBP00751 764 aa11.99□□□□□ -0.49
SDF2-208ENST00000589788 CPA1P15085 419 aa11.99□□□□□ -0.49
SDF2-208ENST00000589788 SMARCA1P28370 1054 aa11.99□□□□□ -0.49
SDF2-208ENST00000589788 ALDH5A1P51649 535 aaPredicted RBP11.99□□□□□ -0.49
SDF2-208ENST00000589788 PWP2Q15269 919 aaKnown RBP11.99□□□□□ -0.49
SDF2-208ENST00000589788 GJC2Q5T442 439 aaPredicted RBP11.99□□□□□ -0.49
SDF2-208ENST00000589788 APOA5Q6Q788 366 aa11.99□□□□□ -0.49
SDF2-208ENST00000589788 NOL8Q76FK4 1167 aaKnown RBP11.99□□□□□ -0.49
SDF2-208ENST00000589788 EEPD1Q7L9B9 569 aa11.99□□□□□ -0.49
SDF2-208ENST00000589788 DNERQ8NFT8 737 aa11.99□□□□□ -0.49
SDF2-208ENST00000589788 SYMPKQ92797 1274 aaKnown RBP11.99□□□□□ -0.49
SDF2-208ENST00000589788 USP26Q9BXU7 913 aa11.99□□□□□ -0.49
SDF2-208ENST00000589788 GDPD2Q9HCC8 539 aa11.99□□□□□ -0.49
SDF2-208ENST00000589788 KLF18A0A0U1RQI7 1052 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 PPP1R11O60927 126 aaPredicted RBP11.98□□□□□ -0.49
SDF2-208ENST00000589788 PLEKHA8P1O95397 391 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 PGK1P00558 417 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 CASTP20810 708 aaKnown RBP11.98□□□□□ -0.49
SDF2-208ENST00000589788 LRRC41Q15345 812 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 RTN1Q16799 776 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 SLC35G1Q2M3R5 365 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 PUS10Q3MIT2 529 aaKnown RBP11.98□□□□□ -0.49
SDF2-208ENST00000589788 RNF180Q86T96 592 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 ANKK1Q8NFD2 765 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 TBC1D5Q92609 795 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 LENG1Q96BZ8 264 aaPredicted RBP11.98□□□□□ -0.49
SDF2-208ENST00000589788 KRTAP3-3Q9BYR6 98 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 KRTAP3-2Q9BYR7 98 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 SENP6Q9GZR1 1112 aaPredicted RBP11.98□□□□□ -0.49
SDF2-208ENST00000589788 SPC25Q9HBM1 224 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 VTA1Q9NP79 307 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 RBM28Q9NW13 759 aaKnown RBP11.98□□□□□ -0.49
SDF2-208ENST00000589788 NR2E3Q9Y5X4 410 aa11.98□□□□□ -0.49
SDF2-208ENST00000589788 GOLGA8AA7E2F4 631 aa11.97□□□□□ -0.49
SDF2-208ENST00000589788 GOLGA8BA8MQT2 603 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms