RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 FGD4Q96M96 766 aa19.28■□□□□ 0.68
SCAMP4-211ENST00000588907 NRBP1Q9UHY1 535 aa19.28■□□□□ 0.68
SCAMP4-211ENST00000588907 CCNT1O60563 726 aaKnown RBP19.27■□□□□ 0.68
SCAMP4-211ENST00000588907 KRT85P78386 507 aa19.27■□□□□ 0.68
SCAMP4-211ENST00000588907 PRKCZQ05513 592 aa19.27■□□□□ 0.68
SCAMP4-211ENST00000588907 FOXD4L5Q5VV16 416 aaPredicted RBP19.27■□□□□ 0.68
SCAMP4-211ENST00000588907 KCNV1Q6PIU1 500 aa19.27■□□□□ 0.68
SCAMP4-211ENST00000588907 FOXD4L4Q8WXT5 416 aaPredicted RBP19.27■□□□□ 0.68
SCAMP4-211ENST00000588907 TINF2Q9BSI4 451 aa19.27■□□□□ 0.68
SCAMP4-211ENST00000588907 POLR3EQ9NVU0 708 aa19.27■□□□□ 0.68
SCAMP4-211ENST00000588907 TSKSQ9UJT2 592 aa19.27■□□□□ 0.68
SCAMP4-211ENST00000588907 ASTN1O14525 1302 aa19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 FAM205CA6NFA0 338 aa19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 NEMFO60524 1076 aa19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 HSPA1AP0DMV8 641 aaKnown RBP19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 HSPA1BP0DMV9 641 aaKnown RBP19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 MYCLP12524 364 aaPredicted RBP19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 CYP2B6P20813 491 aa19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 Q4G0T1 1027 aa19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 ARMCX2Q7L311 632 aa19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 GPRASP2Q96D09 838 aa19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 MBOAT7Q96N66 472 aa19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 INPP4AQ96PE3 977 aaPredicted RBP19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 PURBQ96QR8 312 aaKnown RBP19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 VTA1Q9NP79 307 aa19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 DDX25Q9UHL0 483 aaKnown RBP19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 CNPY2Q9Y2B0 182 aa19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 MORC2Q9Y6X9 1032 aaPredicted RBP19.26■□□□□ 0.67
SCAMP4-211ENST00000588907 LRRC37A2A6NM11 1700 aa19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 TBX3O15119 743 aa19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 HSPA8P11142 646 aaKnown RBP19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 TOB1P50616 345 aaPredicted RBP19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 UBXN2AP68543 259 aa19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 MFSD14CQ5VZR4 134 aa19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 NPLOC4Q8TAT6 608 aa19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 RAET1EQ8TD07 263 aa19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 PXYLP1Q8TE99 480 aa19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 MXRA8Q9BRK3 442 aa19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 ABHD16BQ9H3Z7 469 aa19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 JADE2Q9NQC1 790 aa19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 UBIAD1Q9Y5Z9 338 aa19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 ZSWIM8A7E2V4 1837 aa19.25■□□□□ 0.67
SCAMP4-211ENST00000588907 MEIS1O00470 390 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 FIBPO43427 364 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 ECM2O94769 699 aaPredicted RBP19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 YEATS4O95619 227 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 TGFB3P10600 412 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 MRPS9P82933 396 aaKnown RBP19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 MTMR1Q13613 665 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 CSPP1Q1MSJ5 1256 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 ANO1Q5XXA6 986 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 OTOP1Q7RTM1 612 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 SLFN12Q8IYM2 578 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 SLAIN1Q8ND83 568 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 IL31RAQ8NI17 732 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 SCAND2PQ9GZW5 306 aaPredicted RBP19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 RTEL1Q9NZ71 1219 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 GABRQQ9UN88 632 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 TRIM17Q9Y577 477 aa19.24■□□□□ 0.67
SCAMP4-211ENST00000588907 FAM86B1E9PN63 330 aa19.23■□□□□ 0.67
SCAMP4-211ENST00000588907 FOXN1O15353 648 aa19.23■□□□□ 0.67
SCAMP4-211ENST00000588907 FAM86B2P0C5J1 330 aa19.23■□□□□ 0.67
SCAMP4-211ENST00000588907 ATP2B1P20020 1258 aa19.23■□□□□ 0.67
SCAMP4-211ENST00000588907 ICAM3P32942 547 aa19.23■□□□□ 0.67
SCAMP4-211ENST00000588907 MCM7P33993 719 aa19.23■□□□□ 0.67
SCAMP4-211ENST00000588907 NASPP49321 788 aaPredicted RBP19.23■□□□□ 0.67
SCAMP4-211ENST00000588907 PRR16Q569H4 304 aa19.23■□□□□ 0.67
SCAMP4-211ENST00000588907 PLA2G4DQ86XP0 818 aa19.23■□□□□ 0.67
SCAMP4-211ENST00000588907 GIMAP8Q8ND71 665 aaPredicted RBP19.23■□□□□ 0.67
SCAMP4-211ENST00000588907 FAM20AQ96MK3 541 aa19.23■□□□□ 0.67
SCAMP4-211ENST00000588907 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.23■□□□□ 0.67
SCAMP4-211ENST00000588907 KIAA1217Q5T5P2 1943 aa19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 IGLV3-22A0A075B6J6 115 aa19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 BAG4O95429 457 aaKnown RBP19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 TDP2O95551 362 aa19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 IGHA2P01877 340 aa19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 HMGCRP04035 888 aa19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 ITGB5P18084 799 aa19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 DNM1Q05193 864 aaKnown RBP19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 SF3A1Q15459 793 aaKnown RBP19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 ARL6IP4Q66PJ3 421 aaKnown RBP19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 KCNG4Q8TDN1 519 aa19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 SCFD2Q8WU76 684 aa19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 TNPO1Q92973 898 aaKnown RBP19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 GBP4Q96PP9 640 aa19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 PCDHB6Q9Y5E3 794 aa19.22■□□□□ 0.67
SCAMP4-211ENST00000588907 ADCY3O60266 1144 aa19.21■□□□□ 0.67
SCAMP4-211ENST00000588907 MARCH6O60337 910 aa19.21■□□□□ 0.67
SCAMP4-211ENST00000588907 NCLP19338 710 aaKnown RBP19.21■□□□□ 0.67
SCAMP4-211ENST00000588907 PRPHP41219 470 aa19.21■□□□□ 0.67
SCAMP4-211ENST00000588907 ATP2C1P98194 919 aaPredicted RBP19.21■□□□□ 0.67
SCAMP4-211ENST00000588907 TTLL4Q14679 1199 aa19.21■□□□□ 0.67
SCAMP4-211ENST00000588907 ZNF174Q15697 407 aa19.21■□□□□ 0.67
SCAMP4-211ENST00000588907 PKN2Q16513 984 aaKnown RBP19.21■□□□□ 0.67
SCAMP4-211ENST00000588907 CALCRLQ16602 461 aa19.21■□□□□ 0.67
SCAMP4-211ENST00000588907 FAM173BQ6P4H8 233 aa19.21■□□□□ 0.67
SCAMP4-211ENST00000588907 CLEC17AQ6ZS10 378 aa19.21■□□□□ 0.67
SCAMP4-211ENST00000588907 LENG9Q96B70 501 aa19.21■□□□□ 0.67
SCAMP4-211ENST00000588907 USP28Q96RU2 1077 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms