RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 NSUN6Q8TEA1 469 aaKnown RBP17.22■□□□□ 0.35
NPLOC4-207ENST00000572346 AFG1LQ8WV93 481 aa17.22■□□□□ 0.35
NPLOC4-207ENST00000572346 ZSWIM5Q9P217 1185 aa17.22■□□□□ 0.35
NPLOC4-207ENST00000572346 NOD1Q9Y239 953 aa17.22■□□□□ 0.35
NPLOC4-207ENST00000572346 GH1P01241 217 aa17.21■□□□□ 0.35
NPLOC4-207ENST00000572346 CA3P07451 260 aa17.21■□□□□ 0.35
NPLOC4-207ENST00000572346 MMP3P08254 477 aa17.21■□□□□ 0.35
NPLOC4-207ENST00000572346 CHMP4BP1P59074 171 aa17.21■□□□□ 0.35
NPLOC4-207ENST00000572346 MRPS5P82675 430 aaKnown RBP17.21■□□□□ 0.35
NPLOC4-207ENST00000572346 ARHGAP1Q07960 439 aa17.21■□□□□ 0.35
NPLOC4-207ENST00000572346 BFSP2Q13515 415 aa17.21■□□□□ 0.35
NPLOC4-207ENST00000572346 LY6KQ17RY6 165 aa17.21■□□□□ 0.35
NPLOC4-207ENST00000572346 MCF2L2Q86YR7 1114 aa17.21■□□□□ 0.35
NPLOC4-207ENST00000572346 SLC9A7Q96T83 725 aa17.21■□□□□ 0.35
NPLOC4-207ENST00000572346 DHX16O60231 1041 aaKnown RBP17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 PARP1P09874 1014 aaKnown RBP17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 STXBP2Q15833 593 aa17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 PTGISQ16647 500 aa17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 RNF20Q5VTR2 975 aa17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 CHST3Q7LGC8 479 aa17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 SESTD1Q86VW0 696 aa17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 FBXO11Q86XK2 927 aa17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 PHOSPHO2Q8TCD6 241 aa17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 CTAGE1Q96RT6 745 aa17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 IWS1Q96ST2 819 aa17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 RMDN3Q96TC7 470 aa17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 FTOQ9C0B1 505 aaKnown RBP eCLIP17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 JMJD4Q9H9V9 463 aa17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 VAT1LQ9HCJ6 419 aa17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 MRPL11Q9Y3B7 192 aaKnown RBP17.2■□□□□ 0.34
NPLOC4-207ENST00000572346 TRDNQ13061 729 aa17.19■□□□□ 0.34
NPLOC4-207ENST00000572346 GDF6Q6KF10 455 aaPredicted RBP17.19■□□□□ 0.34
NPLOC4-207ENST00000572346 MICALL1Q8N3F8 863 aa17.19■□□□□ 0.34
NPLOC4-207ENST00000572346 ADAMTS19Q8TE59 1207 aa17.19■□□□□ 0.34
NPLOC4-207ENST00000572346 KAT2BQ92831 832 aa17.19■□□□□ 0.34
NPLOC4-207ENST00000572346 KRT23Q9C075 422 aa17.19■□□□□ 0.34
NPLOC4-207ENST00000572346 PRRC2BQ5JSZ5 2229 aaKnown RBP17.19■□□□□ 0.34
NPLOC4-207ENST00000572346 PTPRSQ13332 1948 aa17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 RFXAPO00287 272 aa17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 CFBP00751 764 aa17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 CYP21A2P08686 494 aa17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 EIF2AK2P19525 551 aaKnown RBP17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 CASTP20810 708 aaKnown RBP17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 ARHGEF16Q5VV41 709 aa17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 CREB3L3Q68CJ9 461 aa17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 HERC6Q8IVU3 1022 aa17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 CAGE1Q8TC20 777 aa17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 UBAC1Q9BSL1 405 aa17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 CERS4Q9HA82 394 aa17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 DDX41Q9UJV9 622 aaKnown RBP17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 MUC3AQ02505 3323 aa17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 NCOR1O75376 2440 aa17.18■□□□□ 0.34
NPLOC4-207ENST00000572346 MYH7BA7E2Y1 1941 aa17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 OPLAHO14841 1288 aa17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 EIF3JO75822 258 aaKnown RBP17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 BAIAP3O94812 1187 aa17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 ARHGEF15O94989 841 aa17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 NR3C2P08235 984 aa17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 POU3F3P20264 500 aaPredicted RBP17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 GPNMBQ14956 572 aa17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 DGKDQ16760 1214 aa17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 STAG2Q8N3U4 1231 aa17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 CCDC155Q8N6L0 562 aa17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 AFAP1L1Q8TED9 768 aa17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 TSPYL2Q9H2G4 693 aaPredicted RBP17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 CNNM2Q9H8M5 875 aa17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 PXMP2Q9NR77 195 aa17.17■□□□□ 0.34
NPLOC4-207ENST00000572346 EPOPA6NHQ4 379 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 KIF28PB7ZC32 967 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 SLC27A2O14975 620 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 EPB41L2O43491 1005 aaKnown RBP17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 HSD17B4P51659 736 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 GHRHRQ02643 423 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 TAP1Q03518 808 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 NECTIN1Q15223 517 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 IFIT1BQ5T764 474 aaKnown RBP17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 RALYLQ86SE5 291 aaKnown RBP17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 DHX38Q92620 1227 aaKnown RBP17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 EMID1Q96A84 441 aaPredicted RBP17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 UHRF1Q96T88 793 aaPredicted RBP17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 AMNQ9BXJ7 453 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 HDAC6Q9UBN7 1215 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 GTF2IRD1Q9UHL9 959 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 MTCH2Q9Y6C9 303 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 MRVI1Q9Y6F6 885 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 TRANK1O15050 2925 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 REV3LO60673 3130 aa17.16■□□□□ 0.34
NPLOC4-207ENST00000572346 TCF20Q9UGU0 1960 aaKnown RBP17.15■□□□□ 0.34
NPLOC4-207ENST00000572346 KLRF2D3W0D1 207 aa17.15■□□□□ 0.34
NPLOC4-207ENST00000572346 GTPBP6O43824 516 aaPredicted RBP17.15■□□□□ 0.34
NPLOC4-207ENST00000572346 PPP1R11O60927 126 aaPredicted RBP17.15■□□□□ 0.34
NPLOC4-207ENST00000572346 SELPP16109 830 aa17.15■□□□□ 0.34
NPLOC4-207ENST00000572346 RBL2Q08999 1139 aa17.15■□□□□ 0.34
NPLOC4-207ENST00000572346 SEC23AQ15436 765 aa17.15■□□□□ 0.34
NPLOC4-207ENST00000572346 C8orf34Q49A92 452 aa17.15■□□□□ 0.34
NPLOC4-207ENST00000572346 LRRC8DQ7L1W4 858 aa17.15■□□□□ 0.34
NPLOC4-207ENST00000572346 IL27Q8NEV9 243 aa17.15■□□□□ 0.34
NPLOC4-207ENST00000572346 MTMR8Q96EF0 704 aa17.15■□□□□ 0.34
NPLOC4-207ENST00000572346 E7EWF7 191 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 ZBTB5O15062 677 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms