RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 COL9A3Q14050 684 aaPredicted RBP8□□□□□ -1.13
SPG11-224ENST00000561268 NECTIN1Q15223 517 aa8□□□□□ -1.13
SPG11-224ENST00000561268 SHHQ15465 462 aa8□□□□□ -1.13
SPG11-224ENST00000561268 GNASQ5JWF2 1037 aa8□□□□□ -1.13
SPG11-224ENST00000561268 NCOA7Q8NI08 942 aa8□□□□□ -1.13
SPG11-224ENST00000561268 IGDCC4Q8TDY8 1250 aa8□□□□□ -1.13
SPG11-224ENST00000561268 SCFD2Q8WU76 684 aa8□□□□□ -1.13
SPG11-224ENST00000561268 EMID1Q96A84 441 aaPredicted RBP8□□□□□ -1.13
SPG11-224ENST00000561268 CHMP4CQ96CF2 233 aa8□□□□□ -1.13
SPG11-224ENST00000561268 VWCEQ96DN2 955 aa8□□□□□ -1.13
SPG11-224ENST00000561268 ESYT1Q9BSJ8 1104 aa8□□□□□ -1.13
SPG11-224ENST00000561268 SPZ1Q9BXG8 430 aa8□□□□□ -1.13
SPG11-224ENST00000561268 UBA5Q9GZZ9 404 aa8□□□□□ -1.13
SPG11-224ENST00000561268 LY9Q9HBG7 655 aa8□□□□□ -1.13
SPG11-224ENST00000561268 SENP2Q9HC62 589 aa8□□□□□ -1.13
SPG11-224ENST00000561268 PRDM5Q9NQX1 630 aaPredicted RBP8□□□□□ -1.13
SPG11-224ENST00000561268 RBM8AQ9Y5S9 174 aaKnown RBP8□□□□□ -1.13
SPG11-224ENST00000561268 EYSQ5T1H1 3165 aa8□□□□□ -1.13
SPG11-224ENST00000561268 EVPLQ92817 2033 aa8□□□□□ -1.13
SPG11-224ENST00000561268 KLRF2D3W0D1 207 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 DDAH1O94760 285 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 ARIH2O95376 493 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 TIMP1P01033 207 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 CHRM1P11229 460 aaPredicted RBP7.99□□□□□ -1.13
SPG11-224ENST00000561268 SMARCA1P28370 1054 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 VASPP50552 380 aaPredicted RBP7.99□□□□□ -1.13
SPG11-224ENST00000561268 FPGSQ05932 587 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 RBL2Q08999 1139 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 PPP2R5BQ15173 497 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 USH1GQ495M9 461 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 VARS2Q5ST30 1063 aaKnown RBP7.99□□□□□ -1.13
SPG11-224ENST00000561268 MFSD5Q6N075 450 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 CXCL17Q6UXB2 119 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 SESTD1Q86VW0 696 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 FBXO11Q86XK2 927 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 IWS1Q96ST2 819 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 AMNQ9BXJ7 453 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 WDR11Q9BZH6 1224 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 POLR3EQ9NVU0 708 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 STXBP5LQ9Y2K9 1186 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 MRPL11Q9Y3B7 192 aaKnown RBP7.99□□□□□ -1.13
SPG11-224ENST00000561268 ARID2Q68CP9 1835 aa7.99□□□□□ -1.13
SPG11-224ENST00000561268 SH2B2O14492 632 aaPredicted RBP7.98□□□□□ -1.13
SPG11-224ENST00000561268 B4GALT4O60513 344 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 RGS20O76081 388 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 RAG1P15918 1043 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 CALML3P27482 149 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 LIFRP42702 1097 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 CPT1AP50416 773 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 ARHGAP1Q07960 439 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 PDE4DQ08499 809 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 TRDNQ13061 729 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 ITGA7Q13683 1181 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 CLEC17AQ6ZS10 378 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 KIAA1211Q6ZU35 1233 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 EEPD1Q7L9B9 569 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 RALYLQ86SE5 291 aaKnown RBP7.98□□□□□ -1.13
SPG11-224ENST00000561268 SGMS1Q86VZ5 419 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 MCF2L2Q86YR7 1114 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 ZNF654Q8IZM8 581 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 NSUN6Q8TEA1 469 aaKnown RBP7.98□□□□□ -1.13
SPG11-224ENST00000561268 TBC1D5Q92609 795 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 TMEM87BQ96K49 555 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 GUCD1Q96NT3 240 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 CTAGE1Q96RT6 745 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 MPHOSPH6Q99547 160 aaKnown RBP7.98□□□□□ -1.13
SPG11-224ENST00000561268 PDCD2LQ9BRP1 358 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 NOC4LQ9BVI4 516 aaKnown RBP7.98□□□□□ -1.13
SPG11-224ENST00000561268 WNT8AQ9H1J5 351 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 ALDH8A1Q9H2A2 487 aaPredicted RBP7.98□□□□□ -1.13
SPG11-224ENST00000561268 PXMP2Q9NR77 195 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 TMEM39AQ9NV64 488 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 CHMP5Q9NZZ3 219 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 CHD7Q9P2D1 2997 aa7.98□□□□□ -1.13
SPG11-224ENST00000561268 BRWD1Q9NSI6 2320 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 DDX11L8A8MPP1 907 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 B4DLN1 442 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 HAS3O00219 553 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 IFIT3O14879 490 aaKnown RBP7.97□□□□□ -1.13
SPG11-224ENST00000561268 SLC27A2O14975 620 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 TLR3O15455 904 aaKnown RBP7.97□□□□□ -1.13
SPG11-224ENST00000561268 DYNC1LI2O43237 492 aaPredicted RBP7.97□□□□□ -1.13
SPG11-224ENST00000561268 ZEB2O60315 1214 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 KPNA6O60684 536 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 F2P00734 622 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 MMP3P08254 477 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 HOXC8P31273 242 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 MRPL12P52815 198 aaKnown RBP7.97□□□□□ -1.13
SPG11-224ENST00000561268 PTPN11Q06124 597 aaPredicted RBP7.97□□□□□ -1.13
SPG11-224ENST00000561268 PPIGQ13427 754 aaKnown RBP eCLIP7.97□□□□□ -1.13
SPG11-224ENST00000561268 TTLL4Q14679 1199 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 WTAPQ15007 396 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 SART3Q15020 963 aaKnown RBP7.97□□□□□ -1.13
SPG11-224ENST00000561268 TSGA10IPQ3SY00 556 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 TMEM240Q5SV17 173 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 NFRKBQ6P4R8 1299 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 PSRC1Q6PGN9 363 aaPredicted RBP7.97□□□□□ -1.13
SPG11-224ENST00000561268 Q7L0L9 218 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 C16orf59Q7L2K0 433 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 DEFB123Q8N688 67 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms