RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 ALDH8A1Q9H2A2 487 aaPredicted RBP16.22■□□□□ 0.19
TNFAIP2-207ENST00000560562 POLR3EQ9NVU0 708 aa16.22■□□□□ 0.19
TNFAIP2-207ENST00000560562 DDX41Q9UJV9 622 aaKnown RBP16.22■□□□□ 0.19
TNFAIP2-207ENST00000560562 hCG_1642624A0A1W2PR95 340 aa16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 B4DLN1 442 aa16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 RBAK-RBAKDNI3L0D1 243 aa16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 TLR3O15455 904 aaKnown RBP16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 EIF3JO75822 258 aaKnown RBP16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 MMP3P08254 477 aa16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 MYCLP12524 364 aaPredicted RBP16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 MRPL12P52815 198 aaKnown RBP16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 EXOSC10Q01780 885 aaKnown RBP16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 NBPF20Q3BBV1 942 aa16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 NFXL1Q6ZNB6 911 aa16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 FCHSD1Q86WN1 690 aa16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 MTG1Q9BT17 334 aaPredicted RBP16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 NOC4LQ9BVI4 516 aaKnown RBP16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 TSHZ2Q9NRE2 1034 aa16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 MTMR10Q9NXD2 777 aa16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 FRMPD4Q14CM0 1322 aa16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 PTPRSQ13332 1948 aa16.21■□□□□ 0.19
TNFAIP2-207ENST00000560562 CCDC69A6NI79 296 aa16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 GCOM1H8Y6P7 765 aaPredicted RBP16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 GH1P01241 217 aa16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 POLR2MP0CAP2 368 aa16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 ACRP10323 421 aa16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 SP2Q02086 613 aa16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 TSGA10IPQ3SY00 556 aa16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 TMEM240Q5SV17 173 aa16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 FAM109BQ6ICB4 259 aaPredicted RBP16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 VSIG10LQ86VR7 867 aa16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 SGMS1Q86VZ5 419 aa16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 KAT2BQ92831 832 aa16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 RNPC3Q96LT9 517 aaKnown RBP16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 NEK1Q96PY6 1258 aa16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 HIPK3Q9H422 1215 aa16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 MAP3K20Q9NYL2 800 aaKnown RBP16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 BRPF3Q9ULD4 1205 aa16.2■□□□□ 0.18
TNFAIP2-207ENST00000560562 SORBS3O60504 671 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 CYP2C9P11712 490 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 CPA1P15085 419 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 KIF5BP33176 963 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 USP17L6PQ6QN14 398 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 TMTC3Q6ZXV5 915 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 MICU3Q86XE3 530 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 TMTC2Q8N394 836 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 GUCD1Q96NT3 240 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 CTAGE1Q96RT6 745 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 BCAS3Q9H6U6 928 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 REV3LO60673 3130 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 VCANP13611 3396 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 MEIS2O14770 477 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 SMARCA1P28370 1054 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 CCL23P55773 120 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 MRPS9P82933 396 aaKnown RBP16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 RASIP1Q5U651 963 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 RNF20Q5VTR2 975 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 APOA5Q6Q788 366 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 CCDC82Q8N4S0 544 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 SAMD3Q8N6K7 520 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 RRP36Q96EU6 259 aaKnown RBP16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 FAM161BQ96MY7 647 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 SLC12A7Q9Y666 1083 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 MRVI1Q9Y6F6 885 aa16.19■□□□□ 0.18
TNFAIP2-207ENST00000560562 CNTNAP5Q8WYK1 1306 aa16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 UBA1P22314 1058 aaKnown RBP16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 SEMA3FQ13275 785 aa16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 PPIGQ13427 754 aaKnown RBP eCLIP16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 FAM47CQ5HY64 1035 aa16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 ZNF365Q70YC5 407 aa16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 TMEM199Q8N511 208 aa16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 FANCBQ8NB91 859 aa16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 KCNB2Q92953 911 aa16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 EMID1Q96A84 441 aaPredicted RBP16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 SCLYQ96I15 445 aa16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 LZTS2Q9BRK4 669 aa16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 SEZ6LQ9BYH1 1024 aa16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 TTYH1Q9H313 450 aaPredicted RBP16.18■□□□□ 0.18
TNFAIP2-207ENST00000560562 KAT6AQ92794 2004 aa16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 ZNF286BP0CG31 522 aa16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 CALM1P0DP23 149 aa16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 CALM2P0DP24 149 aa16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 CALM3P0DP25 149 aa16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 SMAD3P84022 425 aaKnown RBP16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 FUT2Q10981 343 aa16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 TRAF1Q13077 416 aa16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 BRDTQ58F21 947 aaPredicted RBP16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 NFRKBQ6P4R8 1299 aa16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 DHX32Q7L7V1 743 aaKnown RBP16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 IL23AQ9NPF7 189 aa16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 CXXC1Q9P0U4 656 aaPredicted RBP16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 TELO2Q9Y4R8 837 aa16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 TRANK1O15050 2925 aa16.17■□□□□ 0.18
TNFAIP2-207ENST00000560562 KPNA6O60684 536 aa16.16■□□□□ 0.18
TNFAIP2-207ENST00000560562 HOXD8P13378 290 aaPredicted RBP16.16■□□□□ 0.18
TNFAIP2-207ENST00000560562 CCND2P30279 289 aa16.16■□□□□ 0.18
TNFAIP2-207ENST00000560562 GNAQP50148 359 aa16.16■□□□□ 0.18
TNFAIP2-207ENST00000560562 CHMP4BP1P59074 171 aa16.16■□□□□ 0.18
TNFAIP2-207ENST00000560562 HSDL1Q3SXM5 330 aa16.16■□□□□ 0.18
TNFAIP2-207ENST00000560562 MYSM1Q5VVJ2 828 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms