RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PRR16Q569H4 304 aa15.5■□□□□ 0.07
TPM1-215ENST00000558868 DHX40Q8IX18 779 aaKnown RBP15.5■□□□□ 0.07
TPM1-215ENST00000558868 GRAMD1CQ8IYS0 662 aa15.5■□□□□ 0.07
TPM1-215ENST00000558868 AOPEPQ8N6M6 819 aa15.5■□□□□ 0.07
TPM1-215ENST00000558868 ERMNQ8TAM6 284 aa15.5■□□□□ 0.07
TPM1-215ENST00000558868 ATG4CQ96DT6 458 aa15.5■□□□□ 0.07
TPM1-215ENST00000558868 P2RX7Q99572 595 aaKnown RBP15.5■□□□□ 0.07
TPM1-215ENST00000558868 NT5C3AQ9H0P0 336 aa15.5■□□□□ 0.07
TPM1-215ENST00000558868 SPDYE5A6NIY4 337 aa15.49■□□□□ 0.07
TPM1-215ENST00000558868 TAL1P17542 331 aaPredicted RBP15.49■□□□□ 0.07
TPM1-215ENST00000558868 HOXA7P31268 230 aaPredicted RBP15.49■□□□□ 0.07
TPM1-215ENST00000558868 HS1BP3Q53T59 392 aa15.49■□□□□ 0.07
TPM1-215ENST00000558868 SARM1Q6SZW1 724 aa15.49■□□□□ 0.07
TPM1-215ENST00000558868 PROCA1Q8NCQ7 364 aaPredicted RBP15.49■□□□□ 0.07
TPM1-215ENST00000558868 ETNPPLQ8TBG4 499 aa15.49■□□□□ 0.07
TPM1-215ENST00000558868 SNX29Q8TEQ0 813 aa15.49■□□□□ 0.07
TPM1-215ENST00000558868 TBC1D5Q92609 795 aa15.49■□□□□ 0.07
TPM1-215ENST00000558868 TRERF1Q96PN7 1200 aa15.49■□□□□ 0.07
TPM1-215ENST00000558868 MMTAG2Q9BU76 263 aaKnown RBP15.49■□□□□ 0.07
TPM1-215ENST00000558868 KBTBD4Q9NVX7 518 aa15.49■□□□□ 0.07
TPM1-215ENST00000558868 CLEC11AQ9Y240 323 aa15.49■□□□□ 0.07
TPM1-215ENST00000558868 PAPPA2Q9BXP8 1791 aa15.49■□□□□ 0.07
TPM1-215ENST00000558868 TOMM70O94826 608 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 ERCC5P28715 1186 aaPredicted RBP15.48■□□□□ 0.07
TPM1-215ENST00000558868 MYL5Q02045 173 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 PPIL2Q13356 520 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 KCNB1Q14721 858 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 NAALADL2Q58DX5 795 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 HAUS3Q68CZ6 603 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 ISM2Q6H9L7 571 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 SV2BQ7L1I2 683 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 NIPA1Q7RTP0 329 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 KCTD17Q8N5Z5 321 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 MB21D1Q8N884 522 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 REPS2Q8NFH8 660 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 TEX13BQ9BXU2 312 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 ELP3Q9H9T3 547 aa15.48■□□□□ 0.07
TPM1-215ENST00000558868 PARP14Q460N5 1801 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 RPTORQ8N122 1335 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 A0A087WWV3 80 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 A0A0G2JLL6 359 aaPredicted RBP15.47■□□□□ 0.07
TPM1-215ENST00000558868 POTEMA6NI47 508 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 FAM86B1E9PN63 330 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 NFIBO00712 420 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 RPN1P04843 607 aaKnown RBP15.47■□□□□ 0.07
TPM1-215ENST00000558868 FAM86B2P0C5J1 330 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 CCT6AP40227 531 aaKnown RBP15.47■□□□□ 0.07
TPM1-215ENST00000558868 PABPC4Q13310 644 aaKnown RBP eCLIP15.47■□□□□ 0.07
TPM1-215ENST00000558868 GRB10Q13322 594 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 TMEM119Q4V9L6 283 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 CEP55Q53EZ4 464 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 HYIQ5T013 277 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 XRRA1Q6P2D8 792 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 RNF207Q6ZRF8 634 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.47■□□□□ 0.07
TPM1-215ENST00000558868 PRRT2Q7Z6L0 340 aaPredicted RBP15.47■□□□□ 0.07
TPM1-215ENST00000558868 PLA2G4DQ86XP0 818 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 LENG9Q96B70 501 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 C7orf25Q9BPX7 421 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 TRIM5Q9C035 493 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 RNF146Q9NTX7 359 aa15.47■□□□□ 0.07
TPM1-215ENST00000558868 RBBP6Q7Z6E9 1792 aaKnown RBP15.47■□□□□ 0.07
TPM1-215ENST00000558868 OTOFQ9HC10 1997 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 IGLV3-22A0A075B6J6 115 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 GOLGA6L6A8MZA4 724 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 POTECB2RU33 542 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 MSH4O15457 936 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 PTMAP06454 111 aaKnown RBP15.46■□□□□ 0.07
TPM1-215ENST00000558868 BCRP11274 1271 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 CUL4BQ13620 913 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 SNRNP48Q6IEG0 339 aaKnown RBP15.46■□□□□ 0.07
TPM1-215ENST00000558868 DLK2Q6UY11 383 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 GADL1Q6ZQY3 521 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 FASTKD5Q7L8L6 764 aaKnown RBP15.46■□□□□ 0.07
TPM1-215ENST00000558868 SYTL5Q8TDW5 730 aaPredicted RBP15.46■□□□□ 0.07
TPM1-215ENST00000558868 LARP4BQ92615 738 aaKnown RBP15.46■□□□□ 0.07
TPM1-215ENST00000558868 RAD54LQ92698 747 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 OTUD5Q96G74 571 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 PNMA5Q96PV4 448 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 PLIN2Q99541 437 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 MTRQ99707 1265 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 MXRA8Q9BRK3 442 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 BLZF1Q9H2G9 400 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 HOMER2Q9NSB8 354 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 KCNH4Q9UQ05 1017 aa15.46■□□□□ 0.07
TPM1-215ENST00000558868 FRMPD4Q14CM0 1322 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 SPDYE16A6NNV3 312 aaPredicted RBP15.45■□□□□ 0.06
TPM1-215ENST00000558868 MEIS1O00470 390 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 TPM3P06753 285 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 BMP6P22004 513 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 STAT3P40763 770 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 PPP1R2P41236 205 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 FKBP1BP68106 108 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 STIM1Q13586 685 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 MUM1L1Q5H9M0 696 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 LDLRAD1Q5T700 205 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 ZNF658Q5TYW1 1059 aaPredicted RBP15.45■□□□□ 0.06
TPM1-215ENST00000558868 PCNX4Q63HM2 1172 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 CHST13Q8NET6 341 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 ENOX1Q8TC92 643 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms