RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 AMNQ9BXJ7 453 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 FGFBP2Q9BYJ0 223 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 GLIS2Q9BZE0 524 aaPredicted RBP11.8□□□□□ -0.52
TPM1-210ENST00000558264 MAGEF1Q9HAY2 307 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 POLD4Q9HCU8 107 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 KIAA1024Q9UPX6 916 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 TTC26A0AVF1 554 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 MEIS1O00470 390 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 TPM1P09493 284 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 KCNA3P22001 575 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 CCNE1P24864 410 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 MTIF2P46199 727 aaKnown RBP11.8□□□□□ -0.52
TPM1-210ENST00000558264 ERCC6LQ2NKX8 1250 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 CNGA4Q8IV77 575 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 OGFOD1Q8N543 542 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 PCMTD1Q96MG8 357 aaPredicted RBP11.8□□□□□ -0.52
TPM1-210ENST00000558264 ZHX3Q9H4I2 956 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 TFR2Q9UP52 801 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 ADGRG1Q9Y653 693 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 SMCHD1A6NHR9 2005 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 POTEFA5A3E0 1075 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 LGALS16A8MUM7 142 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 OPLAHO14841 1288 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 CCDC175P0C221 793 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 POTEIP0CG38 1075 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 ARHGAP4P98171 946 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 CNNM4Q6P4Q7 775 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 POTEGQ6S5H5 508 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 POTEEQ6S8J3 1075 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 KIFC2Q96AC6 838 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 DHTKD1Q96HY7 919 aaPredicted RBP11.79□□□□□ -0.52
TPM1-210ENST00000558264 THAP9Q9H5L6 903 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 PRR12Q9ULL5 1215 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.79□□□□□ -0.524e-7■■■□□ 19.1
TPM1-210ENST00000558264 ATRNL1Q5VV63 1379 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 ITIH6Q6UXX5 1313 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 SPDYE4A6NLX3 237 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 FAM86B1E9PN63 330 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 ZBTB7AO95365 584 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 FAM86B2P0C5J1 330 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 ORC2Q13416 577 aaPredicted RBP11.79□□□□□ -0.52
TPM1-210ENST00000558264 PDIA5Q14554 519 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 TMEM119Q4V9L6 283 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 NCAPH2Q6IBW4 605 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 GMCL1P1Q8NEA9 526 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 SLF1Q9BQI6 1058 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 STK17AQ9UEE5 414 aa11.79□□□□□ -0.52
TPM1-210ENST00000558264 C10orf71Q711Q0 1435 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 CNTNAP1P78357 1384 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 PHLPP2Q6ZVD8 1323 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 MED24O75448 989 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 CFBP00751 764 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 SYCP1Q15431 976 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 NBPF9Q3BBW0 867 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 UNC13DQ70J99 1090 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 GMCL1Q96IK5 515 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 L2HGDHQ9H9P8 463 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 AGPAT5Q9NUQ2 364 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 FBXO28Q9NVF7 368 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 SPDYE3A6NKU9 549 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 EEF1GP26641 437 aaKnown RBP11.78□□□□□ -0.52
TPM1-210ENST00000558264 CASQ1P31415 396 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 CYP4A11Q02928 519 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 DGKZQ13574 1117 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 NELFCDQ8IXH7 590 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 ZNF507Q8TCN5 953 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 NOC4LQ9BVI4 516 aaKnown RBP11.78□□□□□ -0.52
TPM1-210ENST00000558264 CARD6Q9BX69 1037 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 EPC1Q9H2F5 836 aa11.78□□□□□ -0.52
TPM1-210ENST00000558264 ARFGEF1Q9Y6D6 1849 aa11.77□□□□□ -0.52
TPM1-210ENST00000558264 SRCAPQ6ZRS2 3230 aa11.77□□□□□ -0.52
TPM1-210ENST00000558264 BICDL2A1A5D9 508 aa11.77□□□□□ -0.52
TPM1-210ENST00000558264 VIL1P09327 827 aaKnown RBP11.77□□□□□ -0.52
TPM1-210ENST00000558264 GCFC2P16383 781 aaKnown RBP11.77□□□□□ -0.52
TPM1-210ENST00000558264 PSMC6P62333 389 aa11.77□□□□□ -0.52
TPM1-210ENST00000558264 TBC1D8BQ0IIM8 1120 aa11.77□□□□□ -0.52
TPM1-210ENST00000558264 ERO1AQ96HE7 468 aa11.77□□□□□ -0.52
TPM1-210ENST00000558264 GMLQ99445 158 aa11.77□□□□□ -0.52
TPM1-210ENST00000558264 TRIM10Q9UDY6 481 aa11.77□□□□□ -0.52
TPM1-210ENST00000558264 HDAC9Q9UKV0 1011 aa11.77□□□□□ -0.52
TPM1-210ENST00000558264 ZBTB21Q9ULJ3 1066 aa11.77□□□□□ -0.52
TPM1-210ENST00000558264 EGFRP00533 1210 aa11.77□□□□□ -0.53
TPM1-210ENST00000558264 TFRCP02786 760 aaKnown RBP11.77□□□□□ -0.53
TPM1-210ENST00000558264 TRIM21P19474 475 aaKnown RBP11.77□□□□□ -0.53
TPM1-210ENST00000558264 STAT2P52630 851 aa11.77□□□□□ -0.53
TPM1-210ENST00000558264 COASYQ13057 564 aa11.77□□□□□ -0.53
TPM1-210ENST00000558264 MIIPQ5JXC2 388 aa11.77□□□□□ -0.53
TPM1-210ENST00000558264 GPBP1Q86WP2 473 aa11.77□□□□□ -0.53
TPM1-210ENST00000558264 RTKN2Q8IZC4 609 aa11.77□□□□□ -0.53
TPM1-210ENST00000558264 CCDC155Q8N6L0 562 aa11.77□□□□□ -0.53
TPM1-210ENST00000558264 MAP7D2Q96T17 732 aa11.77□□□□□ -0.53
TPM1-210ENST00000558264 BCAS3Q9H6U6 928 aa11.77□□□□□ -0.53
TPM1-210ENST00000558264 ZSWIM4Q9H7M6 989 aa11.77□□□□□ -0.53
TPM1-210ENST00000558264 KCNMB3Q9NPA1 279 aa11.77□□□□□ -0.53
TPM1-210ENST00000558264 RASSF10A6NK89 507 aa11.76□□□□□ -0.53
TPM1-210ENST00000558264 PLA2G4BP0C869 781 aa11.76□□□□□ -0.53
TPM1-210ENST00000558264 NIM1KQ8IY84 436 aa11.76□□□□□ -0.53
TPM1-210ENST00000558264 FAM151AQ8WW52 585 aa11.76□□□□□ -0.53
TPM1-210ENST00000558264 DNAJC19Q96DA6 116 aa11.76□□□□□ -0.53
TPM1-210ENST00000558264 ARHGEF10LQ9HCE6 1279 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms