RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ATP2B4P23634 1241 aa13.7□□□□□ -0.22
HDAC7-230ENST00000552960 LONP1P36776 959 aaKnown RBP13.7□□□□□ -0.22
HDAC7-230ENST00000552960 EIF4A3P38919 411 aaKnown RBP13.7□□□□□ -0.22
HDAC7-230ENST00000552960 SCNN1DP51172 638 aa13.7□□□□□ -0.22
HDAC7-230ENST00000552960 STK4Q13043 487 aa13.7□□□□□ -0.22
HDAC7-230ENST00000552960 NAALADL2Q58DX5 795 aa13.7□□□□□ -0.22
HDAC7-230ENST00000552960 RRAGAQ7L523 313 aa13.7□□□□□ -0.22
HDAC7-230ENST00000552960 HEATR3Q7Z4Q2 680 aa13.7□□□□□ -0.22
HDAC7-230ENST00000552960 AMOTL1Q8IY63 956 aa13.7□□□□□ -0.22
HDAC7-230ENST00000552960 TRIM58Q8NG06 486 aa13.7□□□□□ -0.22
HDAC7-230ENST00000552960 NCAPGQ9BPX3 1015 aa13.7□□□□□ -0.22
HDAC7-230ENST00000552960 SLC39A2Q9NP94 309 aa13.7□□□□□ -0.22
HDAC7-230ENST00000552960 ATP6V0A2Q9Y487 856 aa13.7□□□□□ -0.22
HDAC7-230ENST00000552960 CALM1P0DP23 149 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 CALM2P0DP24 149 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 CALM3P0DP25 149 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 SLC15A2Q16348 729 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 PTPROQ16827 1216 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 TMC4Q7Z404 712 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 CCDC47Q96A33 483 aaKnown RBP13.69□□□□□ -0.22
HDAC7-230ENST00000552960 OSBPL9Q96SU4 736 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 CRNKL1Q9BZJ0 848 aaKnown RBP13.69□□□□□ -0.22
HDAC7-230ENST00000552960 THAP9Q9H5L6 903 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 PCDHA13Q9Y5I0 950 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 EIF3HO15372 352 aaKnown RBP eCLIP13.69□□□□□ -0.22
HDAC7-230ENST00000552960 BTDP43251 543 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 RASSF7Q02833 373 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 ARID5AQ03989 594 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 EP400NLQ6ZTU2 488 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 OTUD6BQ8N6M0 293 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 WDR66Q8TBY9 1149 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 AENQ8WTP8 325 aaKnown RBP13.69□□□□□ -0.22
HDAC7-230ENST00000552960 ALS2CR12Q96Q35 445 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 RTFDC1Q9BY42 306 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-230ENST00000552960 NFU1Q9UMS0 254 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 CHD4Q14839 1912 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 RASSF10A6NK89 507 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 IL1R1P14778 569 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 MAGEA1P43355 309 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 KIF11P52732 1056 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 TTI2Q6NXR4 508 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 CCDC170Q8IYT3 715 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 CCDC43Q96MW1 224 aaKnown RBP13.69□□□□□ -0.22
HDAC7-230ENST00000552960 DUSP9Q99956 384 aaKnown RBP13.69□□□□□ -0.22
HDAC7-230ENST00000552960 CPVLQ9H3G5 476 aa13.69□□□□□ -0.22
HDAC7-230ENST00000552960 GEMIN8Q9NWZ8 242 aaKnown RBP13.69□□□□□ -0.22
HDAC7-230ENST00000552960 ANO9A1A5B4 782 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 HPDP32754 393 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-230ENST00000552960 GUCY1A3Q02108 690 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 NNTQ13423 1086 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 LETM2Q2VYF4 491 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 SP8Q8IXZ3 490 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 P2RX5Q93086 422 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 NUP58Q9BVL2 599 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 NLRC4Q9NPP4 1024 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 RBM12Q9NTZ6 932 aaKnown RBP13.68□□□□□ -0.22
HDAC7-230ENST00000552960 STIM2Q9P246 746 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 GOLGA8KD6RF30 607 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 EPHB6O15197 1021 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 PLCG1P19174 1290 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 RCAN1P53805 252 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 APBA1Q02410 837 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 GUCY2DQ02846 1103 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 TTMPQ5BVD1 217 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 DPP8Q6V1X1 898 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-230ENST00000552960 DYMQ7RTS9 669 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 CACNA2D4Q7Z3S7 1137 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 STAG2Q8N3U4 1231 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 ANAPC4Q9UJX5 808 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 USP17L3A6NCW0 530 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 USP17L4A6NCW7 530 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 MYO1FO00160 1098 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 NPR1P16066 1061 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 HNRNPH1P31943 449 aaKnown RBP13.68□□□□□ -0.22
HDAC7-230ENST00000552960 MEA1Q16626 185 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 PFKFB3Q16875 520 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-230ENST00000552960 CFAP58Q5T655 872 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 USP17L1Q7RTZ2 530 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 MAATS1Q7Z4T9 603 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 DHX37Q8IY37 1157 aaKnown RBP13.68□□□□□ -0.22
HDAC7-230ENST00000552960 ZIM3Q96PE6 472 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 EPB41L5Q9HCM4 733 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 ARHGAP20Q9P2F6 1191 aa13.68□□□□□ -0.22
HDAC7-230ENST00000552960 NID2Q14112 1375 aa13.67□□□□□ -0.22
HDAC7-230ENST00000552960 G3V3G9 751 aa13.67□□□□□ -0.22
HDAC7-230ENST00000552960 KLRC4O43908 158 aa13.67□□□□□ -0.22
HDAC7-230ENST00000552960 CARSP49589 748 aaKnown RBP13.67□□□□□ -0.22
HDAC7-230ENST00000552960 GFPT1Q06210 699 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-230ENST00000552960 DCAF8Q5TAQ9 597 aa13.67□□□□□ -0.22
HDAC7-230ENST00000552960 MCTP2Q6DN12 878 aa13.67□□□□□ -0.22
HDAC7-230ENST00000552960 CCDC155Q8N6L0 562 aa13.67□□□□□ -0.22
HDAC7-230ENST00000552960 TCP11L1Q9NUJ3 509 aa13.67□□□□□ -0.22
HDAC7-230ENST00000552960 PACSIN2Q9UNF0 486 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-230ENST00000552960 TRAPPC10P48553 1259 aa13.67□□□□□ -0.22
HDAC7-230ENST00000552960 EPHB4P54760 987 aa13.67□□□□□ -0.22
HDAC7-230ENST00000552960 PICALMQ13492 652 aa13.67□□□□□ -0.22
HDAC7-230ENST00000552960 CABP7Q86V35 215 aa13.67□□□□□ -0.22
HDAC7-230ENST00000552960 GIMAP8Q8ND71 665 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-230ENST00000552960 TSGA10Q9BZW7 698 aa13.67□□□□□ -0.22
HDAC7-230ENST00000552960 VAT1LQ9HCJ6 419 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms