RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 GMCL1P1Q8NEA9 526 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 STAG1Q8WVM7 1258 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 CRBNQ96SW2 442 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 ABHD16BQ9H3Z7 469 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 HIPK3Q9H422 1215 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 CYP39A1Q9NYL5 469 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 NRBP1Q9UHY1 535 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 GBF1Q92538 1859 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 SCN5AQ14524 2016 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 TCF20Q9UGU0 1960 aaKnown RBP8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 PTPDC1A2A3K4 754 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 HOXA2O43364 376 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 CST5P28325 142 aaPredicted RBP8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 USP46P62068 366 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 PDE4BQ07343 736 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 FUT2Q10981 343 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 PPIGQ13427 754 aaKnown RBP eCLIP8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 TCTN1Q2MV58 587 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 USH1GQ495M9 461 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 FAM47CQ5HY64 1035 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 RASIP1Q5U651 963 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 RCSD1Q6JBY9 416 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 GIMAP6Q6P9H5 292 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 CHST13Q8NET6 341 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 KCTD12Q96CX2 325 aaKnown RBP8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 GPATCH3Q96I76 525 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 TOX2Q96NM4 488 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 TMEM47Q9BQJ4 181 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 NOC4LQ9BVI4 516 aaKnown RBP8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 UBA5Q9GZZ9 404 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 AP5M1Q9H0R1 490 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 SPC25Q9HBM1 224 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 IL23AQ9NPF7 189 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 LRRC37A2A6NM11 1700 aa8.09□□□□□ -1.11
PRPF40B-214ENST00000551320 PRRC2BQ5JSZ5 2229 aaKnown RBP8.09□□□□□ -1.12
PRPF40B-214ENST00000551320 ELP1O95163 1332 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 NCOR1O75376 2440 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 SPTLC1O15269 473 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 ARIH2O95376 493 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 FGAP02671 866 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 FGBP02675 491 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 ZFYP08048 801 aaPredicted RBP8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 GNAT2P19087 354 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 MX1P20591 662 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 COPB2P35606 906 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 KCNQ1P51787 676 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 NMIQ13287 307 aaPredicted RBP8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 KMT5BQ4FZB7 885 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 SYDE2Q5VT97 1194 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 B4GALNT3Q6L9W6 998 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 CHST3Q7LGC8 479 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 TBC1D10CQ8IV04 446 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 TMEM199Q8N511 208 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 PCSK9Q8NBP7 692 aaKnown RBP8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 CHURC1Q8WUH1 139 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 CLEC4DQ8WXI8 215 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 HLA-CQ95604 372 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 GMCL1Q96IK5 515 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 NACAP1Q9BZK3 213 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 FBXO40Q9UH90 709 aa8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 TSR3Q9UJK0 312 aaKnown RBP8.08□□□□□ -1.12
PRPF40B-214ENST00000551320 SALL3Q9BXA9 1300 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 TLR3O15455 904 aaKnown RBP8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 ALDH5A1P51649 535 aaPredicted RBP8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 OAZ1P54368 228 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 CSPP1Q1MSJ5 1256 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 NBPF20Q3BBV1 942 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 THSD4Q6ZMP0 1018 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 FAM160B2Q86V87 743 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 MSL3Q8N5Y2 521 aaKnown RBP8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 SLC43A3Q8NBI5 491 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 TET1Q8NFU7 2136 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 OR6J1Q8NGC5 347 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 ADAMTS19Q8TE59 1207 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 HERVK_113Q902F9 699 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 GAS2L1Q99501 681 aaPredicted RBP8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 WDR11Q9BZH6 1224 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 LNPKQ9C0E8 428 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 ALDH8A1Q9H2A2 487 aaPredicted RBP8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 VAT1LQ9HCJ6 419 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 PLIN4Q96Q06 1357 aa8.07□□□□□ -1.12
PRPF40B-214ENST00000551320 NEDD4P46934 1319 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 LCHNA4D1U4 455 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 ASB14A6NK59 587 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 CA3P07451 260 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 ZNF200P98182 395 aaPredicted RBP8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 PURAQ00577 322 aaKnown RBP8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 GUCA2AQ02747 115 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 LY6KQ17RY6 165 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 TJAP1Q5JTD0 557 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 PPP2R2DQ66LE6 453 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 FAM117BQ6P1L5 589 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 SEPT14Q6ZU15 432 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 RILPL2Q969X0 211 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 YTHDC1Q96MU7 727 aaKnown RBP8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 TAAR1Q96RJ0 339 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 RANBP17Q9H2T7 1088 aaKnown RBP8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 BCAS3Q9H6U6 928 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 SLC28A3Q9HAS3 691 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 COL20A1Q9P218 1284 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms