RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CCDC144BQ3MJ40 725 aa22.13■■□□□ 1.13
SSH1-209ENST00000551165 KMT5BQ4FZB7 885 aa22.13■■□□□ 1.13
SSH1-209ENST00000551165 XPO4Q9C0E2 1151 aaKnown RBP22.13■■□□□ 1.13
SSH1-209ENST00000551165 NFE2L3Q9Y4A8 694 aa22.13■■□□□ 1.13
SSH1-209ENST00000551165 HSD17B4P51659 736 aa22.13■■□□□ 1.13
SSH1-209ENST00000551165 L3MBTL3Q96JM7 780 aaPredicted RBP22.13■■□□□ 1.13
SSH1-209ENST00000551165 TRIM9Q9C026 710 aa22.13■■□□□ 1.13
SSH1-209ENST00000551165 FANCCQ00597 558 aa22.12■■□□□ 1.13
SSH1-209ENST00000551165 MRFAP1L1Q96HT8 127 aa22.12■■□□□ 1.13
SSH1-209ENST00000551165 C12orf42Q96LP6 360 aa22.12■■□□□ 1.13
SSH1-209ENST00000551165 CUEDC2Q9H467 287 aa22.12■■□□□ 1.13
SSH1-209ENST00000551165 SAMSN1Q9NSI8 373 aaKnown RBP22.12■■□□□ 1.13
SSH1-209ENST00000551165 PTGS1P23219 599 aa22.12■■□□□ 1.13
SSH1-209ENST00000551165 MAP3K9P80192 1104 aa22.12■■□□□ 1.13
SSH1-209ENST00000551165 TMEM119Q4V9L6 283 aa22.12■■□□□ 1.13
SSH1-209ENST00000551165 ENOX1Q8TC92 643 aaKnown RBP22.12■■□□□ 1.13
SSH1-209ENST00000551165 CDK5RAP3Q96JB5 506 aa22.12■■□□□ 1.13
SSH1-209ENST00000551165 PURBQ96QR8 312 aaKnown RBP22.12■■□□□ 1.13
SSH1-209ENST00000551165 DACH1Q9UI36 760 aa22.12■■□□□ 1.13
SSH1-209ENST00000551165 PTPN21Q16825 1174 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 CCDC186Q7Z3E2 898 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 FAM43AQ8N2R8 423 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 IL31RAQ8NI17 732 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 CLMNQ96JQ2 1002 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 KCNF1Q9H3M0 494 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 ZKSCAN5Q9Y2L8 839 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 OTOFQ9HC10 1997 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 MYMKA6NI61 221 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 C19orf81C9J6K1 198 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 MED24O75448 989 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 CCT6AP40227 531 aaKnown RBP22.11■■□□□ 1.13
SSH1-209ENST00000551165 ZNF658Q5TYW1 1059 aaPredicted RBP22.11■■□□□ 1.13
SSH1-209ENST00000551165 SLFN12Q8IYM2 578 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 HPS3Q969F9 1004 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 CTNND2Q9UQB3 1225 aa22.11■■□□□ 1.13
SSH1-209ENST00000551165 COL11A1P12107 1806 aaPredicted RBP22.1■■□□□ 1.13
SSH1-209ENST00000551165 POTEB3A0JP26 581 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 POTECB2RU33 542 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 ZBED4O75132 1171 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 ERCC5P28715 1186 aaPredicted RBP22.1■■□□□ 1.13
SSH1-209ENST00000551165 PRCPP42785 496 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 TPM4P67936 248 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 NCAPH2Q6IBW4 605 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 POTEBQ6S5H4 581 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.1■■□□□ 1.13
SSH1-209ENST00000551165 REPS2Q8NFH8 660 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 LARP4BQ92615 738 aaKnown RBP22.1■■□□□ 1.13
SSH1-209ENST00000551165 RAD54LQ92698 747 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 CDCA5Q96FF9 252 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 C7orf25Q9BPX7 421 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 EAPPQ56P03 285 aaPredicted RBP22.1■■□□□ 1.13
SSH1-209ENST00000551165 NAP1L5Q96NT1 182 aaPredicted RBP22.1■■□□□ 1.13
SSH1-209ENST00000551165 TRERF1Q96PN7 1200 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 VAV3Q9UKW4 847 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 PAPPA2Q9BXP8 1791 aa22.1■■□□□ 1.13
SSH1-209ENST00000551165 GLTPD2A6NH11 291 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 E9PMD0 336 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 PEX10O60683 326 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 ZNF18P17022 549 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 CDC25BP30305 580 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 DSG3P32926 999 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 ARID5BQ14865 1188 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 CATSPERGQ6ZRH7 1159 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 USP50Q70EL3 339 aaPredicted RBP22.09■■□□□ 1.13
SSH1-209ENST00000551165 MAGEF1Q9HAY2 307 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 KIAA1024Q9UPX6 916 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 CTDP1Q9Y5B0 961 aaPredicted RBP22.09■■□□□ 1.13
SSH1-209ENST00000551165 TBX3O15119 743 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 PPP1R12BO60237 982 aaPredicted RBP22.09■■□□□ 1.13
SSH1-209ENST00000551165 ARP10275 920 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 ASIC1P78348 528 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 TREML2Q5T2D2 321 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 SV2BQ7L1I2 683 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 DYMQ7RTS9 669 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 SYTL5Q8TDW5 730 aaPredicted RBP22.09■■□□□ 1.13
SSH1-209ENST00000551165 WDR90Q96KV7 1748 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 ELP3Q9H9T3 547 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 RMND1Q9NWS8 449 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 STK17AQ9UEE5 414 aa22.09■■□□□ 1.13
SSH1-209ENST00000551165 SYNRGQ9UMZ2 1314 aa22.08■■□□□ 1.13
SSH1-209ENST00000551165 EML1O00423 815 aa22.08■■□□□ 1.13
SSH1-209ENST00000551165 RPS6P62753 249 aaKnown RBP22.08■■□□□ 1.13
SSH1-209ENST00000551165 COG2Q14746 738 aa22.08■■□□□ 1.13
SSH1-209ENST00000551165 TMEM132BQ14DG7 1078 aa22.08■■□□□ 1.13
SSH1-209ENST00000551165 FAM20AQ96MK3 541 aa22.08■■□□□ 1.13
SSH1-209ENST00000551165 TMOD4Q9NZQ9 345 aa22.08■■□□□ 1.13
SSH1-209ENST00000551165 RHOBTB3O94955 611 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 FCER1AP12319 257 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 KCNB1Q14721 858 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 POTEEQ6S8J3 1075 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 TAAR1Q96RJ0 339 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 ZNF214Q9UL59 606 aaPredicted RBP22.07■■□□□ 1.12
SSH1-209ENST00000551165 ADAMTS5Q9UNA0 930 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 POTEFA5A3E0 1075 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 SERPINC1P01008 464 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 MYL1P05976 194 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 POTEIP0CG38 1075 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 POTEJP0CG39 1038 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 CEP55Q53EZ4 464 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 HYIQ5T013 277 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms