RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 TLDC2A0PJX2 215 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 PTPDC1A2A3K4 754 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 SNAP23O00161 211 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 ENTPD3O75355 529 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 TOMM70O94826 608 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 GSTA1P08263 222 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 FGRP09769 529 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 INHBEP58166 350 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 TIMM10P62072 90 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 EXOSC10Q01780 885 aaKnown RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 TBC1D8BQ0IIM8 1120 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 NMIQ13287 307 aaPredicted RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 STK38Q15208 465 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 GLE1Q53GS7 698 aaKnown RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 DHX32Q7L7V1 743 aaKnown RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 APOBEC3FQ8IUX4 373 aaKnown RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 CCDC155Q8N6L0 562 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 CCDC26Q8TAB7 109 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 RSRC1Q96IZ7 334 aaKnown RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 EHD4Q9H223 541 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 EBF2Q9HAK2 575 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 PIH1D3Q9NQM4 214 aaKnown RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 DAGLAQ9Y4D2 1042 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 LRRC37A2A6NM11 1700 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 SRCAPQ6ZRS2 3230 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 MYH4Q9Y623 1939 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 C5orf60A6NFR6 353 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 AHCYL1O43865 530 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 MFAP3LO75121 409 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 DDNO94850 711 aaPredicted RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 IPO7O95373 1038 aaKnown RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 ZFYP08048 801 aaPredicted RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 TGFB3P10600 412 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 LMOD1P29536 600 aaPredicted RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 ADD2P35612 726 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 NOVP48745 357 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 SARSP49591 514 aaKnown RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 GSTO1P78417 241 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 NOL9Q5SY16 702 aaKnown RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 RESP18Q5W5W9 173 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 WWC2Q6AWC2 1192 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 SDCCAG8Q86SQ7 713 aaPredicted RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 AACSQ86V21 672 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 MICALL2Q8IY33 904 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 ARFGAP2Q8N6H7 521 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 KBTBD3Q8NAB2 608 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 TRPM4Q8TD43 1214 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 ZFAND2BQ8WV99 257 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 CCDC47Q96A33 483 aaKnown RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 OSBPL9Q96SU4 736 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 SIL1Q9H173 461 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 PLXNB2O15031 1838 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 UTRNP46939 3433 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 WNT10BO00744 389 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 FOXP2O15409 715 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 MGRN1O60291 552 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 JAK2O60674 1132 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 RECKO95980 971 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 FAM107AO95990 144 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 PFKFB1P16118 471 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 EPHB4P54760 987 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 SF3A1Q15459 793 aaKnown RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 DOK7Q18PE1 504 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 MYSM1Q5VVJ2 828 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 ANO1Q5XXA6 986 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 EP400NLQ6ZTU2 488 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 SLF2Q8IX21 1173 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 PARP9Q8IXQ6 854 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 CCDC170Q8IYT3 715 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 SMC1BQ8NDV3 1235 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 SPATA20Q8TB22 786 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 DSCC1Q9BVC3 393 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 CFHR5Q9BXR6 569 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 GINM1Q9NU53 330 aa5.83□□□□□ -1.48
USP28-213ENST00000544967 ZNF219Q9P2Y4 722 aaPredicted RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 CNOT7Q9UIV1 285 aaKnown RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 DIS3Q9Y2L1 958 aaKnown RBP5.83□□□□□ -1.48
USP28-213ENST00000544967 SNUPNO95149 360 aaKnown RBP5.82□□□□□ -1.48
USP28-213ENST00000544967 CTDNEP1O95476 244 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 FESP07332 822 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 PAEPP09466 180 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 ATP1A3P13637 1013 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 GGCXP38435 758 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 CRKP46108 304 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 GNGT1P63211 74 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 MECOMQ03112 1051 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 MFSD14BQ5SR56 506 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 SDE2Q6IQ49 451 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 CHADLQ6NUI6 762 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 ZNF579Q8NAF0 562 aaKnown RBP5.82□□□□□ -1.48
USP28-213ENST00000544967 IQCDQ96DY2 449 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 SCYL1Q96KG9 808 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 PAIP2Q9BPZ3 127 aaKnown RBP5.82□□□□□ -1.48
USP28-213ENST00000544967 SELENOOQ9BVL4 669 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 IL1RAPL2Q9NP60 686 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 ERICH2A1L162 156 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 NDUFAB1O14561 156 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 PECAM1P16284 738 aaPredicted RBP5.82□□□□□ -1.48
USP28-213ENST00000544967 YY1P25490 414 aa5.82□□□□□ -1.48
USP28-213ENST00000544967 SYKP43405 635 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms