RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 HERC5Q9UII4 1024 aaKnown RBP16.75■□□□□ 0.27
CHFR-223ENST00000544268 STXBP3O00186 592 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 STAT6P42226 847 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 CORO7P57737 925 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 LONRF2Q1L5Z9 754 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 TBC1D10BQ4KMP7 808 aaPredicted RBP16.74■□□□□ 0.27
CHFR-223ENST00000544268 FAM83AQ86UY5 434 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 LZTS2Q9BRK4 669 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 ASTN2O75129 1339 aaPredicted RBP16.74■□□□□ 0.27
CHFR-223ENST00000544268 CCDC151A5D8V7 595 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 SNHG28P0DPA3 235 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 EEF2P13639 858 aaKnown RBP16.74■□□□□ 0.27
CHFR-223ENST00000544268 LMNB1P20700 586 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 BRD3Q15059 726 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 TMEM179Q6ZVK1 233 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 SIAH1Q8IUQ4 282 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 RASSF8Q8NHQ8 419 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 SPZ1Q9BXG8 430 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 UBA5Q9GZZ9 404 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 KANSL2Q9H9L4 492 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 TFR2Q9UP52 801 aa16.74■□□□□ 0.27
CHFR-223ENST00000544268 CCDC194A0A1B0GVG4 234 aa16.73■□□□□ 0.27
CHFR-223ENST00000544268 N4BP3O15049 544 aa16.73■□□□□ 0.27
CHFR-223ENST00000544268 MFAP3LO75121 409 aa16.73■□□□□ 0.27
CHFR-223ENST00000544268 BMP15O95972 392 aa16.73■□□□□ 0.27
CHFR-223ENST00000544268 GH2P01242 217 aa16.73■□□□□ 0.27
CHFR-223ENST00000544268 ERVK-24P63145 666 aa16.73■□□□□ 0.27
CHFR-223ENST00000544268 PPFIBP1Q86W92 1011 aa16.73■□□□□ 0.27
CHFR-223ENST00000544268 IRF2BP1Q8IU81 584 aa16.73■□□□□ 0.27
CHFR-223ENST00000544268 MSL3Q8N5Y2 521 aaKnown RBP16.73■□□□□ 0.27
CHFR-223ENST00000544268 HPS3Q969F9 1004 aa16.73■□□□□ 0.27
CHFR-223ENST00000544268 DISC1Q9NRI5 854 aa16.73■□□□□ 0.27
CHFR-223ENST00000544268 PGAP2Q9UHJ9 254 aa16.73■□□□□ 0.27
CHFR-223ENST00000544268 ADGRG1Q9Y653 693 aa16.73■□□□□ 0.27
CHFR-223ENST00000544268 SOCS7O14512 581 aa16.72■□□□□ 0.27
CHFR-223ENST00000544268 GTPBP6O43824 516 aaPredicted RBP16.72■□□□□ 0.27
CHFR-223ENST00000544268 CPP00450 1065 aa16.72■□□□□ 0.27
CHFR-223ENST00000544268 ICA1Q05084 483 aa16.72■□□□□ 0.27
CHFR-223ENST00000544268 PAK1Q13153 545 aa16.72■□□□□ 0.27
CHFR-223ENST00000544268 MIGA2Q7L4E1 593 aa16.72■□□□□ 0.27
CHFR-223ENST00000544268 CCDC91Q7Z6B0 441 aa16.72■□□□□ 0.27
CHFR-223ENST00000544268 FCHSD1Q86WN1 690 aa16.72■□□□□ 0.27
CHFR-223ENST00000544268 SATB1Q01826 763 aa16.72■□□□□ 0.27
CHFR-223ENST00000544268 PPP2R3AQ06190 1150 aa16.72■□□□□ 0.27
CHFR-223ENST00000544268 GPATCH11Q8N954 259 aa16.72■□□□□ 0.27
CHFR-223ENST00000544268 CCDC12Q8WUD4 166 aaPredicted RBP16.72■□□□□ 0.27
CHFR-223ENST00000544268 NYAP2Q9P242 653 aa16.72■□□□□ 0.27
CHFR-223ENST00000544268 VPS18Q9P253 973 aa16.72■□□□□ 0.27
CHFR-223ENST00000544268 KCNJ18B7U540 433 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 SBF1O95248 1867 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 TRAPPC10P48553 1259 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 KCNJ12Q14500 433 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 RASA3Q14644 834 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 LETM2Q2VYF4 491 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 ASPRV1Q53RT3 343 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 MKL1Q969V6 931 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 UIMC1Q96RL1 719 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 GPCPD1Q9NPB8 672 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 TMEM260Q9NX78 707 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 DICER1Q9UPY3 1922 aaKnown RBP16.71■□□□□ 0.27
CHFR-223ENST00000544268 RAD21O60216 631 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 CCDC172P0C7W6 258 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 TXLNAP40222 546 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 COPB1P53618 953 aaKnown RBP16.71■□□□□ 0.27
CHFR-223ENST00000544268 ZNF543Q08ER8 600 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 TCP11X2Q5H9J9 407 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 DTHD1Q6ZMT9 781 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 HNRNPLLQ8WVV9 542 aaKnown RBP16.71■□□□□ 0.27
CHFR-223ENST00000544268 GOLGA1Q92805 767 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 BARHL2Q9NY43 387 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 SH3BP1Q9Y3L3 701 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 MRFAP1Q9Y605 127 aa16.71■□□□□ 0.27
CHFR-223ENST00000544268 PES1O00541 588 aaKnown RBP16.7■□□□□ 0.26
CHFR-223ENST00000544268 YBX3P16989 372 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHFR-223ENST00000544268 CALML3P27482 149 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 GSCP56915 257 aaPredicted RBP16.7■□□□□ 0.26
CHFR-223ENST00000544268 KIF4BQ2VIQ3 1234 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 ZNF658Q5TYW1 1059 aaPredicted RBP16.7■□□□□ 0.26
CHFR-223ENST00000544268 FOXR1Q6PIV2 292 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 PANX2Q96RD6 677 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 CHP1Q99653 195 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 TRIM10Q9UDY6 481 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 KLRC4O43908 158 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 CCNT1O60563 726 aaKnown RBP16.7■□□□□ 0.26
CHFR-223ENST00000544268 SMARCA1P28370 1054 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 LONP1P36776 959 aaKnown RBP16.7■□□□□ 0.26
CHFR-223ENST00000544268 MCTP2Q6DN12 878 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 TTBK2Q6IQ55 1244 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 MMS22LQ6ZRQ5 1243 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 KCTD1Q719H9 257 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 GPIHBP1Q8IV16 184 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 PIGSQ96S52 555 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 RIOX1Q9H6W3 641 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 RWDD2AQ9UIY3 292 aa16.7■□□□□ 0.26
CHFR-223ENST00000544268 CCDC175P0C221 793 aa16.69■□□□□ 0.26
CHFR-223ENST00000544268 TNNI2P48788 182 aa16.69■□□□□ 0.26
CHFR-223ENST00000544268 KLK7P49862 253 aa16.69■□□□□ 0.26
CHFR-223ENST00000544268 NAPAP54920 295 aa16.69■□□□□ 0.26
CHFR-223ENST00000544268 CCDC96Q2M329 555 aa16.69■□□□□ 0.26
CHFR-223ENST00000544268 GJA10Q969M2 543 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms