RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 BFSP2Q13515 415 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 PWP2Q15269 919 aaKnown RBP13.87□□□□□ -0.19
GABPB1-206ENST00000543881 BRDTQ58F21 947 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-206ENST00000543881 RNF207Q6ZRF8 634 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 CTNNA3Q9UI47 895 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 TRIP12Q14669 1992 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-206ENST00000543881 PTPRSQ13332 1948 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 LCHNA4D1U4 455 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 KPNA6O60684 536 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 KCNJ6P48051 423 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 PTPN11Q06124 597 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-206ENST00000543881 MAPK8IP2Q13387 824 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-206ENST00000543881 USH1GQ495M9 461 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 CCDC178Q5BJE1 867 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 GDPD5Q8WTR4 605 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 TBC1D5Q92609 795 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 KAT14Q9H8E8 782 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 CD320Q9NPF0 282 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 NOD1Q9Y239 953 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 PI4K2BG5E9Z4 385 aa13.86□□□□□ -0.19
GABPB1-206ENST00000543881 NKRFO15226 690 aaKnown RBP eCLIP13.86□□□□□ -0.19
GABPB1-206ENST00000543881 EDNRBP24530 442 aa13.86□□□□□ -0.19
GABPB1-206ENST00000543881 PTH1RQ03431 593 aa13.86□□□□□ -0.19
GABPB1-206ENST00000543881 PPP2R5BQ15173 497 aa13.86□□□□□ -0.19
GABPB1-206ENST00000543881 CYB5R4Q7L1T6 521 aa13.86□□□□□ -0.19
GABPB1-206ENST00000543881 ADGRF4Q8IZF3 695 aa13.86□□□□□ -0.19
GABPB1-206ENST00000543881 KRT23Q9C075 422 aa13.86□□□□□ -0.19
GABPB1-206ENST00000543881 LMCD1Q9NZU5 365 aa13.86□□□□□ -0.19
GABPB1-206ENST00000543881 PNMA2Q9UL42 364 aa13.86□□□□□ -0.19
GABPB1-206ENST00000543881 A6NJR5 290 aa13.85□□□□□ -0.19
GABPB1-206ENST00000543881 CHMLP26374 656 aa13.85□□□□□ -0.19
GABPB1-206ENST00000543881 WDR5P61964 334 aaKnown RBP13.85□□□□□ -0.19
GABPB1-206ENST00000543881 PDE4DQ08499 809 aa13.85□□□□□ -0.19
GABPB1-206ENST00000543881 SEC23AQ15436 765 aa13.85□□□□□ -0.19
GABPB1-206ENST00000543881 CDC37Q16543 378 aaPredicted RBP13.85□□□□□ -0.19
GABPB1-206ENST00000543881 ASPRV1Q53RT3 343 aa13.85□□□□□ -0.19
GABPB1-206ENST00000543881 TMCO2Q7Z6W1 182 aaPredicted RBP13.85□□□□□ -0.19
GABPB1-206ENST00000543881 COPS5Q92905 334 aa13.85□□□□□ -0.19
GABPB1-206ENST00000543881 ZBED2Q9BTP6 218 aa13.85□□□□□ -0.19
GABPB1-206ENST00000543881 CNNM2Q9H8M5 875 aa13.85□□□□□ -0.19
GABPB1-206ENST00000543881 TAF6LQ9Y6J9 622 aa13.85□□□□□ -0.19
GABPB1-206ENST00000543881 BRWD1Q9NSI6 2320 aa13.85□□□□□ -0.19
GABPB1-206ENST00000543881 CHMP4BP1P59074 171 aa13.84□□□□□ -0.19
GABPB1-206ENST00000543881 PTGISQ16647 500 aa13.84□□□□□ -0.19
GABPB1-206ENST00000543881 QRICH1Q2TAL8 776 aa13.84□□□□□ -0.19
GABPB1-206ENST00000543881 STAG2Q8N3U4 1231 aa13.84□□□□□ -0.19
GABPB1-206ENST00000543881 CCDC155Q8N6L0 562 aa13.84□□□□□ -0.19
GABPB1-206ENST00000543881 RGS22Q8NE09 1264 aa13.84□□□□□ -0.19
GABPB1-206ENST00000543881 SCFD2Q8WU76 684 aa13.84□□□□□ -0.19
GABPB1-206ENST00000543881 MPHOSPH6Q99547 160 aaKnown RBP13.84□□□□□ -0.19
GABPB1-206ENST00000543881 JMJD4Q9H9V9 463 aa13.84□□□□□ -0.19
GABPB1-206ENST00000543881 COL20A1Q9P218 1284 aa13.84□□□□□ -0.19
GABPB1-206ENST00000543881 CYP21A2P08686 494 aa13.83□□□□□ -0.2
GABPB1-206ENST00000543881 PARP1P09874 1014 aaKnown RBP13.83□□□□□ -0.2
GABPB1-206ENST00000543881 TXNP10599 105 aaKnown RBP13.83□□□□□ -0.2
GABPB1-206ENST00000543881 DEFB103AP81534 67 aa13.83□□□□□ -0.2
GABPB1-206ENST00000543881 GPNMBQ14956 572 aa13.83□□□□□ -0.2
GABPB1-206ENST00000543881 ALYREFQ86V81 257 aaKnown RBP13.83□□□□□ -0.2
GABPB1-206ENST00000543881 DNERQ8NFT8 737 aa13.83□□□□□ -0.2
GABPB1-206ENST00000543881 CAGE1Q8TC20 777 aa13.83□□□□□ -0.2
GABPB1-206ENST00000543881 AFAP1L1Q8TED9 768 aa13.83□□□□□ -0.2
GABPB1-206ENST00000543881 UBAC1Q9BSL1 405 aa13.83□□□□□ -0.2
GABPB1-206ENST00000543881 UBE2ZQ9H832 354 aaPredicted RBP13.83□□□□□ -0.2
GABPB1-206ENST00000543881 SUGCTQ9HAC7 445 aa13.83□□□□□ -0.2
GABPB1-206ENST00000543881 VAT1LQ9HCJ6 419 aa13.83□□□□□ -0.2
GABPB1-206ENST00000543881 MTUS1Q9ULD2 1270 aa13.83□□□□□ -0.2
GABPB1-206ENST00000543881 MUC6Q6W4X9 2439 aa13.83□□□□□ -0.2
GABPB1-206ENST00000543881 ABCB11O95342 1321 aa13.82□□□□□ -0.2
GABPB1-206ENST00000543881 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.82□□□□□ -0.2
GABPB1-206ENST00000543881 PRR33A8MZF0 331 aa13.82□□□□□ -0.2
GABPB1-206ENST00000543881 ARIH2O95376 493 aa13.82□□□□□ -0.2
GABPB1-206ENST00000543881 SLC35G1Q2M3R5 365 aa13.82□□□□□ -0.2
GABPB1-206ENST00000543881 IFIT1BQ5T764 474 aaKnown RBP13.82□□□□□ -0.2
GABPB1-206ENST00000543881 GJD3Q8N144 294 aa13.82□□□□□ -0.2
GABPB1-206ENST00000543881 SYTL5Q8TDW5 730 aaPredicted RBP13.82□□□□□ -0.2
GABPB1-206ENST00000543881 TAAR1Q96RJ0 339 aa13.82□□□□□ -0.2
GABPB1-206ENST00000543881 TGS1Q96RS0 853 aaKnown RBP13.82□□□□□ -0.2
GABPB1-206ENST00000543881 CTAGE1Q96RT6 745 aa13.82□□□□□ -0.2
GABPB1-206ENST00000543881 SENP2Q9HC62 589 aa13.82□□□□□ -0.2
GABPB1-206ENST00000543881 OPLAHO14841 1288 aa13.81□□□□□ -0.2
GABPB1-206ENST00000543881 SGSM2O43147 1006 aa13.81□□□□□ -0.2
GABPB1-206ENST00000543881 SELPP16109 830 aa13.81□□□□□ -0.2
GABPB1-206ENST00000543881 ERVK-21P61565 698 aa13.81□□□□□ -0.2
GABPB1-206ENST00000543881 GDF6Q6KF10 455 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-206ENST00000543881 CNKSR3Q6P9H4 555 aa13.81□□□□□ -0.2
GABPB1-206ENST00000543881 STOX1Q6ZVD7 989 aa13.81□□□□□ -0.2
GABPB1-206ENST00000543881 LRRC8DQ7L1W4 858 aa13.81□□□□□ -0.2
GABPB1-206ENST00000543881 FAM178BQ8IXR5 827 aa13.81□□□□□ -0.2
GABPB1-206ENST00000543881 RAD9AQ99638 391 aa13.81□□□□□ -0.2
GABPB1-206ENST00000543881 MAD2L2Q9UI95 211 aa13.81□□□□□ -0.2
GABPB1-206ENST00000543881 SIP14410 1827 aa13.81□□□□□ -0.2
GABPB1-206ENST00000543881 LINC01553A4QN01 128 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 B4DLN1 442 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 KLRF2D3W0D1 207 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 DHX16O60231 1041 aaKnown RBP13.8□□□□□ -0.2
GABPB1-206ENST00000543881 PPP1R11O60927 126 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-206ENST00000543881 NBNO60934 754 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 GJB5O95377 273 aa13.8□□□□□ -0.2
GABPB1-206ENST00000543881 PARNO95453 639 aaKnown RBP13.8□□□□□ -0.2
GABPB1-206ENST00000543881 CXCL10P02778 98 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms