RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 NR3C2P08235 984 aa11.26□□□□□ -0.61
TNFRSF1A-214ENST00000543048 POLR2MP0CAP2 368 aa11.26□□□□□ -0.61
TNFRSF1A-214ENST00000543048 CDK7P50613 346 aa11.26□□□□□ -0.61
TNFRSF1A-214ENST00000543048 MDM2Q00987 491 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-214ENST00000543048 TTLL4Q14679 1199 aa11.26□□□□□ -0.61
TNFRSF1A-214ENST00000543048 ADCK5Q3MIX3 580 aa11.26□□□□□ -0.61
TNFRSF1A-214ENST00000543048 ANKRD33Q7Z3H0 272 aa11.26□□□□□ -0.61
TNFRSF1A-214ENST00000543048 SRBD1Q8N5C6 995 aaKnown RBP11.26□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PIBF1Q8WXW3 757 aa11.26□□□□□ -0.61
TNFRSF1A-214ENST00000543048 UBE2OQ9C0C9 1292 aaKnown RBP11.26□□□□□ -0.61
TNFRSF1A-214ENST00000543048 TRIP12Q14669 1992 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 KAT6AQ92794 2004 aa11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 A0A0U1RQG5 324 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 ARVCFO00192 962 aa11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PQBP1O60828 265 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 CLTBP09497 229 aa11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 TXNP10599 105 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 HSPA4P34932 840 aa11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 FXR1P51114 621 aaKnown RBP eCLIP11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 BRDTQ58F21 947 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 CXCL17Q6UXB2 119 aa11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 SEPT14Q6ZU15 432 aa11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 SH3RF1Q7Z6J0 888 aa11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 OR6J1Q8NGC5 347 aa11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 SEZ6LQ9BYH1 1024 aa11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PRDM5Q9NQX1 630 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PDLIM7Q9NR12 457 aa11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PXMP2Q9NR77 195 aa11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 SEC63Q9UGP8 760 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 MROH7Q68CQ1 1323 aa11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 LTBP2Q14767 1821 aa11.25□□□□□ -0.61
TNFRSF1A-214ENST00000543048 TRIM43BA6NCK2 446 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 KIAA0355O15063 1070 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 EPB41L2O43491 1005 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 KPNA6O60684 536 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PLEKHA8P1O95397 391 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 SLC34A2O95436 690 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 EIF2AK2P19525 551 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 RXRAP19793 462 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PTGS1P23219 599 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 HOXA13P31271 388 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 CPT1AP50416 773 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 FAAP100Q0VG06 881 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PPP2R5BQ15173 497 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 CCDC62Q6P9F0 684 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 VSIG10LQ86VR7 867 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 CMTR1Q8N1G2 835 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 SLC43A3Q8NBI5 491 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 TRIM43Q96BQ3 446 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 TCEANC2Q96MN5 208 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 TMEM39AQ9NV64 488 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 POLR3EQ9NVU0 708 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 SNX14Q9Y5W7 946 aa11.24□□□□□ -0.61
TNFRSF1A-214ENST00000543048 SCN10AQ9Y5Y9 1956 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 A6NJR5 290 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 TLR3O15455 904 aaKnown RBP11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 ZBTB43O43298 467 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 MYCLP12524 364 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PSMA5P28066 241 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 FGD1P98174 961 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 ITGA7Q13683 1181 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 KCNV1Q6PIU1 500 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 APOA5Q6Q788 366 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 BLOC1S2Q6QNY1 142 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 TMTC3Q6ZXV5 915 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 FCHSD1Q86WN1 690 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 MICU3Q86XE3 530 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 RAB11FIP4Q86YS3 637 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 TDHQ8IZJ6 230 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 CCDC82Q8N4S0 544 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 COPS5Q92905 334 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 BADQ92934 168 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 CUL5Q93034 780 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 JAKMIP1Q96N16 626 aaKnown RBP11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PDCD2LQ9BRP1 358 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 RBM28Q9NW13 759 aaKnown RBP11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 DDX41Q9UJV9 622 aaKnown RBP11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 DOCK5Q9H7D0 1870 aa11.23□□□□□ -0.61
TNFRSF1A-214ENST00000543048 GRIN2DO15399 1336 aa11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 ARIH2O95376 493 aa11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 GH1P01241 217 aa11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 MYL3P08590 195 aa11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 RAG1P15918 1043 aa11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 CCND2P30279 289 aa11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PGM5Q15124 567 aa11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 RTN1Q16799 776 aa11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 LY6KQ17RY6 165 aa11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 Q6ZUG5 572 aa11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 SMARCC2Q8TAQ2 1214 aa11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 MTG1Q9BT17 334 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 USP26Q9BXU7 913 aa11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PCDH10Q9P2E7 1040 aa11.22□□□□□ -0.61
TNFRSF1A-214ENST00000543048 KLF18A0A0U1RQI7 1052 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 hCG_1642624A0A1W2PR95 340 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PIK3CDO00329 1044 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 TIMP1P01033 207 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 CD4P01730 458 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 TGFB3P10600 412 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 CPA1P15085 419 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms