RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 DPH6Q7L8W6 267 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 OTUD6BQ8N6M0 293 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 ZNF483Q8TF39 744 aaPredicted RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 RUBCNQ92622 972 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 SYMPKQ92797 1274 aaKnown RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 EPB41L4AQ9HCS5 686 aaPredicted RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 HOMER2Q9NSB8 354 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 RWDD2AQ9UIY3 292 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 LUC7L2Q9Y383 392 aaKnown RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 LRRC10BA6NIK2 292 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 MBD4O95243 580 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 PYGLP06737 847 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 RDXP35241 583 aaKnown RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 GSTO1P78417 241 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 ZC3H12AQ5D1E8 599 aaKnown RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 KCTD16Q68DU8 428 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 FAM196AQ6ZSG2 479 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 CACNA2D4Q7Z3S7 1137 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 FAM228AQ86W67 206 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 SH2D3CQ8N5H7 860 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 BICD1Q96G01 975 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 EPSTI1Q96J88 318 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 SH3GL2Q99962 352 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 GPCPD1Q9NPB8 672 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 JADE2Q9NQC1 790 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 QSER1Q2KHR3 1735 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 SMIM22K7EJ46 135 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 KLRK1P26718 216 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 EPHB4P54760 987 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 NAPAP54920 295 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 SKOR1P84550 965 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 NELFBQ8WX92 580 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 TBC1D31Q96DN5 1066 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 GJD4Q96KN9 370 aaPredicted RBP5.77□□□□□ -1.49
PROM1-220ENST00000540805 SRP68Q9UHB9 627 aaKnown RBP5.77□□□□□ -1.49
PROM1-220ENST00000540805 GGA1Q9UJY5 639 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 RPS6KL1Q9Y6S9 549 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 CCDC88AQ3V6T2 1871 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 A0A1B0GVG6 124 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 TTC26A0AVF1 554 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 ZEB2O60315 1214 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 FSBPO95073 299 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 BMP15O95972 392 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 SCNN1DP51172 638 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 CLNS1AP54105 237 aaKnown RBP5.77□□□□□ -1.49
PROM1-220ENST00000540805 PDCLQ13371 301 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 PUM3Q15397 648 aaKnown RBP5.77□□□□□ -1.49
PROM1-220ENST00000540805 TDRD12Q587J7 1177 aaKnown RBP5.77□□□□□ -1.49
PROM1-220ENST00000540805 NSMFQ6X4W1 530 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 ZNF662Q6ZS27 426 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 PROM2Q8N271 834 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 MMGT1Q8N4V1 131 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 OXER1Q8TDS5 423 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 LPIN2Q92539 896 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 RRP36Q96EU6 259 aaKnown RBP5.77□□□□□ -1.49
PROM1-220ENST00000540805 TACO1Q9BSH4 297 aaKnown RBP5.77□□□□□ -1.49
PROM1-220ENST00000540805 A1CFQ9NQ94 594 aaKnown RBP5.77□□□□□ -1.49
PROM1-220ENST00000540805 NID2Q14112 1375 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 hCG_1642624A0A1W2PR95 340 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 PDE2AO00408 941 aaPredicted RBP5.77□□□□□ -1.49
PROM1-220ENST00000540805 ZNF185O15231 689 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 MEFVO15553 781 aaPredicted RBP5.77□□□□□ -1.49
PROM1-220ENST00000540805 EPB41P11171 864 aaKnown RBP5.77□□□□□ -1.49
PROM1-220ENST00000540805 GCKP35557 465 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 FNTAP49354 379 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 RPS8P62241 208 aaKnown RBP5.77□□□□□ -1.49
PROM1-220ENST00000540805 PARP10Q53GL7 1025 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 RNF187Q5TA31 235 aaPredicted RBP5.77□□□□□ -1.49
PROM1-220ENST00000540805 ALS2CLQ60I27 953 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 TAX1BP1Q86VP1 789 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 GPIHBP1Q8IV16 184 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 STAMQ92783 540 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 FERMT2Q96AC1 680 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 DNAJC7Q99615 494 aa5.77□□□□□ -1.49
PROM1-220ENST00000540805 MYH6P13533 1939 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 HARSP12081 509 aaKnown RBP5.76□□□□□ -1.49
PROM1-220ENST00000540805 SEC24CP53992 1094 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 APBA1Q02410 837 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 DDR1Q08345 913 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 KCNB1Q14721 858 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 C11orf91Q3C1V1 193 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 EMBQ6PCB8 327 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 MAPKAPK5Q8IW41 473 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 STAG1Q8WVM7 1258 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 BLZF1Q9H2G9 400 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 CNNM2Q9H8M5 875 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 RMND1Q9NWS8 449 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 NARFQ9UHQ1 456 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 NOD1Q9Y239 953 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 ADAMTSL1Q8N6G6 1762 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 RPS6KA4O75676 772 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 PARP1P09874 1014 aaKnown RBP5.76□□□□□ -1.49
PROM1-220ENST00000540805 BCAMP50895 628 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 CHRNDQ07001 517 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 NBPF20Q3BBV1 942 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 TTMPQ5BVD1 217 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 MB21D1Q8N884 522 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 CELF1Q92879 486 aaKnown RBP5.76□□□□□ -1.49
PROM1-220ENST00000540805 TATDN2Q93075 761 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 ARL8AQ96BM9 186 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms