RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 TBCAO75347 108 aaKnown RBP14.25□□□□□ -0.13
MSH6-210ENST00000540021 SMIM5Q71RC9 77 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 EYA3Q99504 573 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 DNAJC7Q99615 494 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 DDX47Q9H0S4 455 aaKnown RBP14.25□□□□□ -0.13
MSH6-210ENST00000540021 SH2D4AQ9H788 454 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 DCP1AQ9NPI6 582 aaPredicted RBP14.25□□□□□ -0.13
MSH6-210ENST00000540021 PANK4Q9NVE7 773 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 TMEM260Q9NX78 707 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 TACC3Q9Y6A5 838 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 CNTNAP5Q8WYK1 1306 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 C6orf229H3BNL8 230 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 RBM5P52756 815 aaKnown RBP eCLIP14.25□□□□□ -0.13
MSH6-210ENST00000540021 ADAM9Q13443 819 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 NWD1Q149M9 1564 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 PDS5AQ29RF7 1337 aaKnown RBP14.25□□□□□ -0.13
MSH6-210ENST00000540021 PNPLA7Q6ZV29 1317 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 TCP11Q8WWU5 503 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 SAMD15Q9P1V8 674 aa14.25□□□□□ -0.13
MSH6-210ENST00000540021 FAM205AQ6ZU69 1335 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 LDHCP07864 332 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 AMPD2Q01433 879 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 TSEN2Q8NCE0 465 aaKnown RBP14.24□□□□□ -0.13
MSH6-210ENST00000540021 PBX1P40424 430 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 SEC23AQ15436 765 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 GKAP1Q5VSY0 366 aaPredicted RBP14.24□□□□□ -0.13
MSH6-210ENST00000540021 WDR59Q6PJI9 974 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 SH3RF1Q7Z6J0 888 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 GPBP1Q86WP2 473 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 SETDB2Q96T68 719 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 PLA2G12BQ9BX93 195 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 TCEAL9Q9UHQ7 104 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 LSP1P33241 339 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 SLCO1A2P46721 670 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 ADCY7P51828 1080 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 DHX9Q08211 1270 aaKnown RBP14.24□□□□□ -0.13
MSH6-210ENST00000540021 RDH13Q8NBN7 331 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 LMBR1Q8WVP7 490 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 GJA10Q969M2 543 aa14.24□□□□□ -0.13
MSH6-210ENST00000540021 TMOD1P28289 359 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 ERFEQ4G0M1 354 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 NLRP14Q86W24 1093 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 GIMAP8Q8ND71 665 aaPredicted RBP14.23□□□□□ -0.13
MSH6-210ENST00000540021 DDX12PQ92771 950 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 CARD10Q9BWT7 1032 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 CD248Q9HCU0 757 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 KIAA1024Q9UPX6 916 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 KIF4AO95239 1232 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 NEFHP12036 1026 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 CRKLP46109 303 aaKnown RBP14.23□□□□□ -0.13
MSH6-210ENST00000540021 RPS8P62241 208 aaKnown RBP14.23□□□□□ -0.13
MSH6-210ENST00000540021 APTXQ7Z2E3 356 aaKnown RBP14.23□□□□□ -0.13
MSH6-210ENST00000540021 CCT8L2Q96SF2 557 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 NCAPGQ9BPX3 1015 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 ODF2LQ9ULJ1 636 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 RGPD1P0DJD0 1748 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 MEFVO15553 781 aaPredicted RBP14.23□□□□□ -0.13
MSH6-210ENST00000540021 PPP1R37O75864 691 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 FKBP3Q00688 224 aaKnown RBP14.23□□□□□ -0.13
MSH6-210ENST00000540021 ARHGAP44Q17R89 818 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 FAM83BQ5T0W9 1011 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 TTI2Q6NXR4 508 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.23□□□□□ -0.13
MSH6-210ENST00000540021 SYCP3Q8IZU3 236 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 N4BP2L2Q92802 583 aaPredicted RBP14.23□□□□□ -0.13
MSH6-210ENST00000540021 MTRQ99707 1265 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 ARHGAP20Q9P2F6 1191 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 CD2APQ9Y5K6 639 aa14.23□□□□□ -0.13
MSH6-210ENST00000540021 CTNND1O60716 968 aaKnown RBP14.22□□□□□ -0.13
MSH6-210ENST00000540021 RHOBTB3O94955 611 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 CYP19A1P11511 503 aaPredicted RBP14.22□□□□□ -0.13
MSH6-210ENST00000540021 IL6STP40189 918 aaPredicted RBP14.22□□□□□ -0.13
MSH6-210ENST00000540021 HDLBPQ00341 1268 aaKnown RBP14.22□□□□□ -0.13
MSH6-210ENST00000540021 UBXN6Q9BZV1 441 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 TMX4Q9H1E5 349 aaPredicted RBP14.22□□□□□ -0.13
MSH6-210ENST00000540021 ATP8A2Q9NTI2 1148 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 PCDHA6Q9UN73 950 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 STK38LQ9Y2H1 464 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 PCDHA8Q9Y5H6 950 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 COL4A3BPQ9Y5P4 624 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 ADCY1Q08828 1119 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 UBE4AQ14139 1066 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 SNCBQ16143 134 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 UBE2SQ16763 222 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 MARCH10Q8NA82 808 aaPredicted RBP14.22□□□□□ -0.13
MSH6-210ENST00000540021 SPATA20Q8TB22 786 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 ZNF473Q8WTR7 871 aaKnown RBP14.22□□□□□ -0.13
MSH6-210ENST00000540021 GPR101Q96P66 508 aaPredicted RBP14.22□□□□□ -0.13
MSH6-210ENST00000540021 BRIP1Q9BX63 1249 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 PCDHA12Q9UN75 941 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 FLOT1O75955 427 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 GLI1P08151 1106 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 FAM153BP0C7A2 387 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 DDB1Q16531 1140 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 FAM153CQ494X1 144 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 HIBCHQ6NVY1 386 aaPredicted RBP14.22□□□□□ -0.13
MSH6-210ENST00000540021 FAM153AQ9UHL3 310 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 RCAN1P53805 252 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 KCNB1Q14721 858 aa14.22□□□□□ -0.13
MSH6-210ENST00000540021 IL17AQ16552 155 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms